Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 19 869 XP_006713721 19 869 NP_001078896 17 3301 NP_001078894 17 3301 NP_001078897 17 3301 NP_000478 17 3301 NP_001078895 17 3301 XP_006726390 17 3301 XP_006726389 17 3301 XP_006726388 17 3301 XP_006726387 17 3301 XP_006724477 17 3301 XP_006710131 17 3301 XP_006710130 17 3301 XP_006710129 17 3301 XP_006710128 17 3301 NP_009098 17 4312 NP_536355 16 5631 NP_060019 16 5631 NP_001229877 16 5631 NP_056126 16 7355 NP_009049 16 7355 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_997704 16 7355 NP_006245 16 7355 XP_006714558 16 7355 XP_006713322 16 7355 XP_006713321 16 7355 XP_006713320 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 XP_005246482 16 7355 XP_005246481 16 7355 XP_006712450 16 7355 XP_005246480 16 7355 XP_006712449 16 7355 XP_005246478 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_001269676 15 9605 NP_001273708 15 9605 NP_001269675 15 9605 NP_057358 15 9605 NP_115669 15 9605 NP_612398 15 9605 NP_001269674 15 9605 NP_001273047 15 9605 NP_001273048 15 9605 NP_775104 15 9605 NP_001003694 15 9605 NP_060697 15 9605 XP_005274213 15 9605 XP_005274211 15 9605 XP_005252438 15 9605 XP_005252437 15 9605 XP_005252325 15 9605 XP_006717365 15 9605 XP_005252324 15 9605 XP_006714316 15 9605 XP_005262730 15 9605 XP_005262729 15 9605 XP_005265509 15 9605 XP_005265507 15 9605>NP_006209 Length = 1068 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLSEITVQE 9 PLSEIT QE Sbjct: 539 PLSEITEQE 547>XP_006713721 Length = 1068 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLSEITVQE 9 PLSEIT QE Sbjct: 539 PLSEITEQE 547>NP_001078896 Length = 509 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL E+TV E Sbjct: 103 PLEEVTVAE 111>NP_001078894 Length = 509 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL E+TV E Sbjct: 103 PLEEVTVAE 111>NP_001078897 Length = 423 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL E+TV E Sbjct: 17 PLEEVTVAE 25>NP_000478 Length = 509 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL E+TV E Sbjct: 103 PLEEVTVAE 111>NP_001078895 Length = 509 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL E+TV E Sbjct: 103 PLEEVTVAE 111>XP_006726390 Length = 1353 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLSEITVQE 9 PLS IT+Q+ Sbjct: 684 PLSSITLQD 692>XP_006726389 Length = 1471 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLSEITVQE 9 PLS IT+Q+ Sbjct: 802 PLSSITLQD 810>XP_006726388 Length = 1489 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLSEITVQE 9 PLS IT+Q+ Sbjct: 820 PLSSITLQD 828>XP_006726387 Length = 1497 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLSEITVQE 9 PLS IT+Q+ Sbjct: 868 PLSSITLQD 876>XP_006724477 Length = 488 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL E+TV E Sbjct: 103 PLEEVTVAE 111>XP_006710131 Length = 1353 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLSEITVQE 9 PLS IT+Q+ Sbjct: 684 PLSSITLQD 692>XP_006710130 Length = 1471 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLSEITVQE 9 PLS IT+Q+ Sbjct: 802 PLSSITLQD 810>XP_006710129 Length = 1489 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLSEITVQE 9 PLS IT+Q+ Sbjct: 820 PLSSITLQD 828>XP_006710128 Length = 1497 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLSEITVQE 9 PLS IT+Q+ Sbjct: 868 PLSSITLQD 876>NP_009098 Length = 1325 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PLSEITVQ 8 PLS +T+Q Sbjct: 877 PLSNVTIQ 884>NP_536355 Length = 145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLSEITVQE 9 PLSE+T +E Sbjct: 96 PLSEMTREE 104>NP_060019 Length = 224 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 P +ITVQE Sbjct: 142 PQEQITVQE 150>NP_001229877 Length = 163 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 P +ITVQE Sbjct: 81 PQEQITVQE 89>NP_056126 Length = 1896 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++T+ E Sbjct: 1545 PLEDVTISE 1553>NP_009049 Length = 3097 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PLSEITVQ 8 PLSE+T + Sbjct: 2690 PLSEVTCE 2697>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++TV E Sbjct: 4994 PLKDVTVPE 5002>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++TV E Sbjct: 5119 PLKDVTVPE 5127>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++TV E Sbjct: 12418 PLKDVTVPE 12426>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++TV E Sbjct: 11491 PLKDVTVPE 11499>NP_997704 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLSEITV 7 P+SE+TV Sbjct: 80 PVSEVTV 86>NP_006245 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLSEITV 7 P+SE+TV Sbjct: 80 PVSEVTV 86>XP_006714558 Length = 2612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PLSEITVQ 8 PLSE+T + Sbjct: 2205 PLSEVTCE 2212>XP_006713322 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLSEITV 7 P+SE+TV Sbjct: 80 PVSEVTV 86>XP_006713321 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLSEITV 7 P+SE+TV Sbjct: 80 PVSEVTV 86>XP_006713320 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLSEITV 7 P+SE+TV Sbjct: 96 PVSEVTV 102>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++TV E Sbjct: 731 PLKDVTVPE 739>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++TV E Sbjct: 2090 PLKDVTVPE 2098>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++TV E Sbjct: 12046 PLKDVTVPE 12054>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++TV E Sbjct: 13552 PLKDVTVPE 13560>XP_005246482 Length = 1724 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++T+ E Sbjct: 1361 PLEDVTISE 1369>XP_005246481 Length = 1804 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++T+ E Sbjct: 1453 PLEDVTISE 1461>XP_006712450 Length = 1816 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++T+ E Sbjct: 1453 PLEDVTISE 1461>XP_005246480 Length = 1816 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++T+ E Sbjct: 1453 PLEDVTISE 1461>XP_006712449 Length = 1908 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++T+ E Sbjct: 1545 PLEDVTISE 1553>XP_005246478 Length = 1908 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++T+ E Sbjct: 1545 PLEDVTISE 1553>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++TV E Sbjct: 14059 PLKDVTVPE 14067>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL ++TV E Sbjct: 5186 PLKDVTVPE 5194>NP_001269676 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL E+ +QE Sbjct: 323 PLKELCLQE 331>NP_001273708 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PLSE V+E Sbjct: 610 PLSESPVEE 618>NP_001269675 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL E+ +QE Sbjct: 586 PLKELCLQE 594>NP_057358 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSEITVQE 9 L E+TV+E Sbjct: 139 LDEVTVEE 146>NP_115669 Length = 1013 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PLSE V+E Sbjct: 632 PLSESPVEE 640>NP_612398 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 P SEI +QE Sbjct: 104 PRSEIPLQE 112>NP_001269674 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL E+ +QE Sbjct: 586 PLKELCLQE 594>NP_001273047 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSEITVQE 9 L EITVQ+ Sbjct: 9 LMEITVQQ 16>NP_001273048 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSEITVQE 9 L EITVQ+ Sbjct: 9 LMEITVQQ 16>NP_775104 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL E+ +QE Sbjct: 586 PLKELCLQE 594>NP_001003694 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PLSEIT 6 PLSE+T Sbjct: 658 PLSEVT 663>NP_060697 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSEITVQE 9 LSE+ +QE Sbjct: 787 LSEVKIQE 794>XP_005274213 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSEITVQE 9 L EITVQ+ Sbjct: 9 LMEITVQQ 16>XP_005274211 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSEITVQE 9 L EITVQ+ Sbjct: 9 LMEITVQQ 16>XP_005252438 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL E+ +QE Sbjct: 498 PLKELCLQE 506>XP_005252437 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PL E+ +QE Sbjct: 521 PLKELCLQE 529>XP_005252325 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PLSE V+E Sbjct: 655 PLSESPVEE 663>XP_006717365 Length = 1062 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PLSE V+E Sbjct: 681 PLSESPVEE 689>XP_005252324 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 PLSE V+E Sbjct: 695 PLSESPVEE 703>XP_006714316 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSEITVQE 9 LSE+ +QE Sbjct: 712 LSEVKIQE 719>XP_005262730 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 P SEI +QE Sbjct: 104 PRSEIPLQE 112>XP_005262729 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLSEITVQE 9 P SEI +QE Sbjct: 104 PRSEIPLQE 112>XP_005265509 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PLSEIT 6 PLSE+T Sbjct: 658 PLSEVT 663>XP_005265507 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PLSEIT 6 PLSE+T Sbjct: 658 PLSEVT 663Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.123 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 476,020 Number of extensions: 1021 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |