Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_940857 17 2528 NP_001025459 17 4312 NP_056019 17 4312 NP_003114 17 4312 XP_005276570 17 4312 XP_006715725 17 4312 XP_006715724 17 4312 XP_006715723 17 4312 XP_006715722 17 4312 NP_005667 16 5631 NP_690595 16 5631 NP_542382 16 5631 NP_076418 16 5631 NP_001191396 16 5631 NP_001191395 16 5631 NP_001191397 16 5631 NP_001099009 16 5631 NP_060184 16 5631 XP_006724626 16 5631 XP_005272736 16 5631 XP_005272735 16 5631 XP_005272734 16 5631 XP_006723653 16 5631 XP_006723652 16 5631 XP_005251344 16 5631 NP_002175 16 7355 NP_001177910 16 7355 NP_003743 16 7355 NP_001254503 16 7355 NP_001273407 16 7355 NP_001032897 16 7355 NP_149072 16 7355 NP_001275701 16 7355 NP_001186071 16 7355 NP_001180298 16 7355 NP_004561 16 7355 NP_001093131 16 7355 NP_001275703 16 7355 XP_005255592 16 7355 XP_005253450 16 7355 XP_006719151 16 7355 NP_060660 15 9605 NP_061987 15 9605 NP_789794 15 9605 NP_542398 15 9605 NP_001269690 15 9605 XP_006717209 15 9605 XP_006717208 15 9605 XP_006717207 15 9605 XP_005263163 15 9605 XP_005264177 15 9605>NP_940857 Length = 5147 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PLLASEDRR 9 PLLASE R Sbjct: 4568 PLLASEQHR 4576>NP_001025459 Length = 400 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLLASED 7 PL+ASED Sbjct: 375 PLVASED 381>NP_056019 Length = 1657 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLASEDRR 9 PLL+ +D+R Sbjct: 439 PLLSQQDKR 447>NP_003114 Length = 400 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLLASED 7 PL+ASED Sbjct: 375 PLVASED 381>XP_005276570 Length = 400 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PLLASED 7 PL+ASED Sbjct: 375 PLVASED 381>XP_006715725 Length = 1516 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLASEDRR 9 PLL+ +D+R Sbjct: 439 PLLSQQDKR 447>XP_006715724 Length = 1533 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLASEDRR 9 PLL+ +D+R Sbjct: 439 PLLSQQDKR 447>XP_006715723 Length = 1559 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLASEDRR 9 PLL+ +D+R Sbjct: 439 PLLSQQDKR 447>XP_006715722 Length = 1614 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLASEDRR 9 PLL+ +D+R Sbjct: 439 PLLSQQDKR 447>NP_005667 Length = 930 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P LAS+DR Sbjct: 714 PKLASDDR 721>NP_690595 Length = 852 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P LAS+DR Sbjct: 636 PKLASDDR 643>NP_542382 Length = 178 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLLASEDRR 9 P ASE+RR Sbjct: 132 PRFASEERR 140>NP_076418 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLLASEDRR 9 PLLA +RR Sbjct: 113 PLLAERNRR 121>NP_001191396 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P LAS+DR Sbjct: 713 PKLASDDR 720>NP_001191395 Length = 853 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P LAS+DR Sbjct: 637 PKLASDDR 644>NP_001191397 Length = 995 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P LAS+DR Sbjct: 779 PKLASDDR 786>NP_001099009 Length = 871 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLLASEDRR 9 PLLA +RR Sbjct: 113 PLLAERNRR 121>NP_060184 Length = 420 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PLLASED 7 P LASED Sbjct: 331 PFLASED 337>XP_006724626 Length = 727 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P LAS+DR Sbjct: 511 PKLASDDR 518>XP_005272736 Length = 917 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P LAS+DR Sbjct: 701 PKLASDDR 708>XP_005272735 Length = 918 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P LAS+DR Sbjct: 702 PKLASDDR 709>XP_005272734 Length = 994 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P LAS+DR Sbjct: 778 PKLASDDR 785>XP_006723653 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PLLASED 7 P LASED Sbjct: 229 PFLASED 235>XP_006723652 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PLLASED 7 P LASED Sbjct: 229 PFLASED 235>XP_005251344 Length = 859 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLLASEDRR 9 PLLA +RR Sbjct: 113 PLLAERNRR 121>NP_002175 Length = 918 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 PLL SE+R Sbjct: 785 PLLDSEER 792>NP_001177910 Length = 857 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 PLL SE+R Sbjct: 724 PLLDSEER 731>NP_003743 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PLLASED 7 PLL SED Sbjct: 35 PLLLSED 41>NP_001254503 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PLLASED 7 PLL SED Sbjct: 35 PLLLSED 41>NP_001273407 Length = 903 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PLLASED 7 PLL SED Sbjct: 35 PLLLSED 41>NP_001032897 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PLLASED 7 PLL SED Sbjct: 35 PLLLSED 41>NP_149072 Length = 2240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASEDRR 9 ASEDRR Sbjct: 2109 ASEDRR 2114>NP_001275701 Length = 1486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLASEDRR 9 PLL SE+++ Sbjct: 707 PLLLSEEKK 715>NP_001186071 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PLLASED 7 PLL SED Sbjct: 35 PLLLSED 41>NP_001180298 Length = 2240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASEDRR 9 ASEDRR Sbjct: 2109 ASEDRR 2114>NP_004561 Length = 1445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLASEDRR 9 PLL SE+++ Sbjct: 666 PLLLSEEKK 674>NP_001093131 Length = 914 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PLLASED 7 PLL SED Sbjct: 35 PLLLSED 41>NP_001275703 Length = 1264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLASEDRR 9 PLL SE+++ Sbjct: 485 PLLLSEEKK 493>XP_005255592 Length = 914 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PLLASED 7 PLL SED Sbjct: 35 PLLLSED 41>XP_005253450 Length = 1486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLASEDRR 9 PLL SE+++ Sbjct: 707 PLLLSEEKK 715>XP_006719151 Length = 1486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLASEDRR 9 PLL SE+++ Sbjct: 707 PLLLSEEKK 715>NP_060660 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P+LA +DR Sbjct: 163 PVLACQDR 170>NP_061987 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P+L+S DR Sbjct: 476 PVLSSSDR 483>NP_789794 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P+LA +DR Sbjct: 163 PVLACQDR 170>NP_542398 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLLASED 7 P+LA+ED Sbjct: 99 PVLAAED 105>NP_001269690 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLLASED 7 P+LA+ED Sbjct: 124 PVLAAED 130>XP_006717209 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P+L+S DR Sbjct: 476 PVLSSSDR 483>XP_006717208 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P+L+S DR Sbjct: 476 PVLSSSDR 483>XP_006717207 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P+L+S DR Sbjct: 476 PVLSSSDR 483>XP_005263163 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PLLASEDR 8 P+LA +DR Sbjct: 163 PVLACQDR 170>XP_005264177 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLLASED 7 P+LA+ED Sbjct: 99 PVLAAED 105Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.135 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 563,886 Number of extensions: 966 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |