Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 299 XP_005262424 20 299 NP_054868 17 3301 XP_005250342 17 3301 NP_001239155 16 5631 NP_006613 16 5631 NP_061181 16 5631 NP_038477 16 5631 XP_006719271 16 5631 XP_005268661 16 5631 XP_005268660 16 5631 XP_005268659 16 5631 XP_005268657 16 5631 XP_006719270 16 5631 XP_005268656 16 5631 XP_005268654 16 5631 XP_005268653 16 5631 NP_001138295 16 7355 NP_005839 16 7355 NP_001269618 16 7355 NP_055524 16 7355 NP_076982 16 7355 NP_001269619 16 7355 NP_001269617 16 7355 XP_006726471 16 7355 XP_005254179 16 7355 XP_005254178 16 7355 XP_006720435 16 7355 XP_005254177 16 7355 XP_006720434 16 7355 XP_005254176 16 7355 XP_006717345 16 7355 XP_005252255 16 7355 XP_005252253 16 7355 XP_005252252 16 7355 XP_005252250 16 7355 XP_006710212 16 7355 NP_067653 15 9605 NP_001124468 15 9605 NP_000850 15 9605 NP_001185708 15 9605 NP_003582 15 9605 NP_060720 15 9605 NP_694533 15 9605 NP_001276091 15 9605 NP_653292 15 9605 NP_001185707 15 9605 NP_001185706 15 9605 XP_006721364 15 9605 XP_005273625 15 9605 XP_006716420 15 9605 XP_006716419 15 9605 XP_003403748 15 9605 NP_001138631 15 9605 NP_001070706 15 9605 NP_619635 15 9605 NP_001276092 15 9605 NP_115645 15 9605>NP_722576 Length = 3080 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PKFKLTTLL 9 P+FKLTTLL Sbjct: 752 PEFKLTTLL 760>XP_005262424 Length = 2875 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PKFKLTTLL 9 P+FKLTTLL Sbjct: 547 PEFKLTTLL 555>NP_054868 Length = 747 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KFKLTTLL 9 K KLTTLL Sbjct: 736 KIKLTTLL 743>XP_005250342 Length = 773 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KFKLTTLL 9 K KLTTLL Sbjct: 762 KIKLTTLL 769>NP_001239155 Length = 671 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 FKLTTLL 9 F+LTTLL Sbjct: 641 FRLTTLL 647>NP_006613 Length = 685 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 FKLTTLL 9 F+LTTLL Sbjct: 655 FRLTTLL 661>NP_061181 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 P F+ TTLL Sbjct: 311 PHFRWTTLL 319>NP_038477 Length = 1905 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 PK K+T LL Sbjct: 677 PKVKITELL 685>XP_006719271 Length = 1555 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 PK K+T LL Sbjct: 696 PKVKITELL 704>XP_005268661 Length = 1657 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 PK K+T LL Sbjct: 429 PKVKITELL 437>XP_005268660 Length = 1875 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 PK K+T LL Sbjct: 647 PKVKITELL 655>XP_005268659 Length = 1894 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 PK K+T LL Sbjct: 666 PKVKITELL 674>XP_005268657 Length = 1903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 PK K+T LL Sbjct: 675 PKVKITELL 683>XP_006719270 Length = 1903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 PK K+T LL Sbjct: 675 PKVKITELL 683>XP_005268656 Length = 1903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 PK K+T LL Sbjct: 675 PKVKITELL 683>XP_005268654 Length = 1923 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 PK K+T LL Sbjct: 696 PKVKITELL 704>XP_005268653 Length = 1924 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 PK K+T LL Sbjct: 696 PKVKITELL 704>NP_001138295 Length = 1906 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PKFKLTTLL 9 P F L TLL Sbjct: 1347 PSFNLDTLL 1355>NP_005839 Length = 1863 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PKFKLTTLL 9 P F L TLL Sbjct: 1304 PSFNLDTLL 1312>NP_001269618 Length = 781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PKFKLTTL 8 P+F+ TTL Sbjct: 141 PEFEFTTL 148>NP_055524 Length = 3546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 P FKL T+L Sbjct: 2602 PFFKLLTML 2610>NP_076982 Length = 854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PKFKLTTL 8 P+F+ TTL Sbjct: 214 PEFEFTTL 221>NP_001269619 Length = 786 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PKFKLTTL 8 P+F+ TTL Sbjct: 146 PEFEFTTL 153>NP_001269617 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PKFKLTTL 8 P+F+ TTL Sbjct: 213 PEFEFTTL 220>XP_006726471 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KFKLTTLL 9 +FK++TLL Sbjct: 15 RFKISTLL 22>XP_005254179 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PKFKLTTLL 9 P F L TLL Sbjct: 614 PSFNLDTLL 622>XP_005254178 Length = 1863 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PKFKLTTLL 9 P F L TLL Sbjct: 1304 PSFNLDTLL 1312>XP_006720435 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PKFKLTTLL 9 P F L TLL Sbjct: 1348 PSFNLDTLL 1356>XP_005254177 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PKFKLTTLL 9 P F L TLL Sbjct: 1348 PSFNLDTLL 1356>XP_006720434 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PKFKLTTLL 9 P F L TLL Sbjct: 1348 PSFNLDTLL 1356>XP_005254176 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PKFKLTTLL 9 P F L TLL Sbjct: 1348 PSFNLDTLL 1356>XP_006717345 Length = 781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PKFKLTTL 8 P+F+ TTL Sbjct: 141 PEFEFTTL 148>XP_005252255 Length = 786 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PKFKLTTL 8 P+F+ TTL Sbjct: 146 PEFEFTTL 153>XP_005252253 Length = 815 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PKFKLTTL 8 P+F+ TTL Sbjct: 214 PEFEFTTL 221>XP_005252252 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PKFKLTTL 8 P+F+ TTL Sbjct: 214 PEFEFTTL 221>XP_005252250 Length = 824 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PKFKLTTL 8 P+F+ TTL Sbjct: 214 PEFEFTTL 221>XP_006710212 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KFKLTTLL 9 +FK++TLL Sbjct: 15 RFKISTLL 22>NP_067653 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 P++ LTT L Sbjct: 187 PRYALTTTL 195>NP_001124468 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 P +KL TL+ Sbjct: 477 PAYKLETLM 485>NP_000850 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 P +KL TL+ Sbjct: 477 PAYKLETLM 485>NP_001185708 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KFKLTT 7 KFK+TT Sbjct: 663 KFKITT 668>NP_003582 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KFKLTT 7 KFK+TT Sbjct: 650 KFKITT 655>NP_060720 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFKLTTLL 9 KFK TT++ Sbjct: 18 KFKSTTIM 25>NP_694533 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PKFKLTTLL 9 P FK TLL Sbjct: 343 PTFKACTLL 351>NP_001276091 Length = 874 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PKFKLTTL 8 PKF TTL Sbjct: 126 PKFVSTTL 133>NP_653292 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PKFKLTTL 8 P+F+LT L Sbjct: 383 PQFRLTLL 390>NP_001185707 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KFKLTT 7 KFK+TT Sbjct: 669 KFKITT 674>NP_001185706 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KFKLTT 7 KFK+TT Sbjct: 650 KFKITT 655>XP_006721364 Length = 831 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PKFKLTTL 8 PKF TTL Sbjct: 126 PKFVSTTL 133>XP_005273625 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFKLTTLL 9 KFK TT++ Sbjct: 18 KFKSTTIM 25>XP_006716420 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFKLTTLL 9 KFK TT++ Sbjct: 18 KFKSTTIM 25>XP_006716419 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFKLTTLL 9 KFK TT++ Sbjct: 18 KFKSTTIM 25>XP_003403748 Length = 997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 PK ++ TLL Sbjct: 369 PKLRVVTLL 377>NP_001138631 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFKLTTLL 9 KFK TT++ Sbjct: 18 KFKSTTIM 25>NP_001070706 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PKFKLTTLL 9 P FK TLL Sbjct: 343 PTFKACTLL 351>NP_619635 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKFKLTTLL 9 PK ++ TLL Sbjct: 415 PKLRVVTLL 423>NP_001276092 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PKFKLTTL 8 PKF TTL Sbjct: 126 PKFVSTTL 133>NP_115645 Length = 874 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PKFKLTTL 8 PKF TTL Sbjct: 126 PKFVSTTL 133Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.144 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 377,055 Number of extensions: 494 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |