Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 390 NP_002970 17 2528 NP_001182192 17 2528 NP_079171 17 2528 NP_001180528 17 2528 NP_001180529 17 2528 NP_001180546 17 2528 XP_006718038 17 2528 XP_005270222 17 2528 XP_005271160 17 2528 NP_001128627 17 4312 NP_001276907 17 4312 NP_004638 17 4312 XP_005259346 17 4312 XP_006711698 17 4312 NP_003310 16 5631 NP_597676 16 5631 NP_001243779 16 5631 NP_596869 16 5631 NP_001166251 16 5631 NP_699184 16 5631 NP_001166250 16 5631 XP_005249007 16 5631 XP_005248380 16 5631 XP_005248379 16 5631 XP_005248378 16 5631 XP_006713571 16 5631 XP_005246888 16 5631 XP_006712788 16 5631 XP_006712787 16 5631 XP_006712786 16 5631 NP_001012458 16 5631 NP_060610 16 5631 NP_001254479 16 5631 NP_597681 16 5631 NP_001164100 16 7355 NP_001159635 16 7355 NP_001159632 16 7355 NP_001159634 16 7355 NP_001159633 16 7355 NP_001167589 16 7355 XP_006716110 16 7355 XP_005250542 16 7355 XP_006716109 16 7355 NP_060120 16 7355 NP_001161206 15 9605 NP_001269335 15 9605 NP_703149 15 9605 NP_065910 15 9605 NP_001161205 15 9605 NP_065175 15 9605 NP_543006 15 9605 NP_061026 15 9605 NP_065880 15 9605 NP_001161707 15 9605 NP_001129392 15 9605 NP_001193486 15 9605 XP_005260806 15 9605 XP_005251580 15 9605 XP_005263222 15 9605 XP_005263221 15 9605 XP_005263220 15 9605 XP_006714345 15 9605 XP_005263219 15 9605 NP_076419 15 9605 NP_001034597 15 9605>NP_004295 Length = 1620 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 PGSKMALQ 8 PGSKMALQ Sbjct: 431 PGSKMALQ 438>NP_002970 Length = 547 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PGSKMALQ 8 PG+K+ALQ Sbjct: 382 PGAKVALQ 389>NP_001182192 Length = 1033 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PGSKMALQR 9 PG K ALQR Sbjct: 455 PGEKGALQR 463>NP_079171 Length = 517 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PGSKMALQR 9 PG K ALQR Sbjct: 455 PGEKGALQR 463>NP_001180528 Length = 523 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PGSKMALQ 8 PG+K+ALQ Sbjct: 358 PGAKVALQ 365>NP_001180529 Length = 503 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PGSKMALQ 8 PG+K+ALQ Sbjct: 338 PGAKVALQ 345>NP_001180546 Length = 466 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PGSKMALQ 8 PG+K+ALQ Sbjct: 301 PGAKVALQ 308>XP_006718038 Length = 537 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PGSKMALQR 9 PG K ALQR Sbjct: 455 PGEKGALQR 463>XP_005270222 Length = 561 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PGSKMALQR 9 PG K ALQR Sbjct: 455 PGEKGALQR 463>XP_005271160 Length = 463 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PGSKMALQ 8 PG+K+ALQ Sbjct: 382 PGAKVALQ 389>NP_001128627 Length = 414 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PGSKMA 6 PGSKMA Sbjct: 24 PGSKMA 29>NP_001276907 Length = 424 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PGSKMA 6 PGSKMA Sbjct: 24 PGSKMA 29>NP_004638 Length = 380 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PGSKMA 6 PGSKMA Sbjct: 24 PGSKMA 29>XP_005259346 Length = 397 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PGSKMA 6 PGSKMA Sbjct: 24 PGSKMA 29>XP_006711698 Length = 846 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GSKMALQR 9 GS++ALQR Sbjct: 702 GSQLALQR 709>NP_003310 Length = 26926 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSKMALQR 9 G KMA+QR Sbjct: 12844 GIKMAMQR 12851>NP_597676 Length = 27051 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSKMALQR 9 G KMA+QR Sbjct: 12969 GIKMAMQR 12976>NP_001243779 Length = 34350 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSKMALQR 9 G KMA+QR Sbjct: 20268 GIKMAMQR 20275>NP_596869 Length = 33423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSKMALQR 9 G KMA+QR Sbjct: 19341 GIKMAMQR 19348>NP_001166251 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PGSKMALQR 9 PG+ +A+QR Sbjct: 38 PGAALAVQR 46>NP_699184 Length = 432 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PGSKMALQR 9 PG+ +A+QR Sbjct: 38 PGAALAVQR 46>NP_001166250 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PGSKMALQR 9 PG+ +A+QR Sbjct: 38 PGAALAVQR 46>XP_005249007 Length = 389 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGSKMALQR 9 PG + ALQR Sbjct: 60 PGPREALQR 68>XP_005248380 Length = 458 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGSKMALQ 8 PG K ALQ Sbjct: 223 PGKKTALQ 230>XP_005248379 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGSKMALQ 8 PG K ALQ Sbjct: 362 PGKKTALQ 369>XP_005248378 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGSKMALQ 8 PG K ALQ Sbjct: 412 PGKKTALQ 419>XP_006713571 Length = 446 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PGSKMALQR 9 PG+ +A+QR Sbjct: 38 PGAALAVQR 46>XP_005246888 Length = 22663 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSKMALQR 9 G KMA+QR Sbjct: 8581 GIKMAMQR 8588>XP_006712788 Length = 24022 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSKMALQR 9 G KMA+QR Sbjct: 9940 GIKMAMQR 9947>XP_006712787 Length = 33978 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSKMALQR 9 G KMA+QR Sbjct: 19896 GIKMAMQR 19903>XP_006712786 Length = 35484 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSKMALQR 9 G KMA+QR Sbjct: 21402 GIKMAMQR 21409>NP_001012458 Length = 389 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGSKMALQR 9 PG + ALQR Sbjct: 60 PGPREALQR 68>NP_060610 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGSKMALQ 8 PG K ALQ Sbjct: 412 PGKKTALQ 419>NP_001254479 Length = 35991 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSKMALQR 9 G KMA+QR Sbjct: 21909 GIKMAMQR 21916>NP_597681 Length = 27118 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSKMALQR 9 G KMA+QR Sbjct: 13036 GIKMAMQR 13043>NP_001164100 Length = 2581 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PGSKMALQR 9 PG++ A+QR Sbjct: 229 PGNQAAVQR 237>NP_001159635 Length = 1090 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGSKMALQ 8 PGS MA++ Sbjct: 648 PGSDMAIE 655>NP_001159632 Length = 1374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGSKMALQ 8 PGS MA++ Sbjct: 670 PGSDMAIE 677>NP_001159634 Length = 1253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGSKMALQ 8 PGS MA++ Sbjct: 648 PGSDMAIE 655>NP_001159633 Length = 1296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGSKMALQ 8 PGS MA++ Sbjct: 648 PGSDMAIE 655>NP_001167589 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PGSKMALQR 9 PG ALQR Sbjct: 656 PGGASALQR 664>XP_006716110 Length = 1141 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGSKMALQ 8 PGS MA++ Sbjct: 691 PGSDMAIE 698>XP_005250542 Length = 1357 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGSKMALQ 8 PGS MA++ Sbjct: 691 PGSDMAIE 698>XP_006716109 Length = 1365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGSKMALQ 8 PGS MA++ Sbjct: 691 PGSDMAIE 698>NP_060120 Length = 1098 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGSKMALQ 8 PGS MA++ Sbjct: 648 PGSDMAIE 655>NP_001161206 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PGSKMALQR 9 PG+++ L+R Sbjct: 600 PGAELTLER 608>NP_001269335 Length = 225 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PGSKMA 6 PGSK+A Sbjct: 25 PGSKLA 30>NP_703149 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PGSKMA 6 PGS+MA Sbjct: 278 PGSRMA 283>NP_065910 Length = 1996 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGSKMALQ 8 PGS ALQ Sbjct: 763 PGSASALQ 770>NP_001161205 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PGSKMALQR 9 PG+++ L+R Sbjct: 430 PGAELTLER 438>NP_065175 Length = 1063 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PGSKMALQR 9 PG+++ L+R Sbjct: 570 PGAELTLER 578>NP_543006 Length = 170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PGSKMAL 7 PG++MAL Sbjct: 136 PGTEMAL 142>NP_061026 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PGSKMAL 7 PG++MAL Sbjct: 136 PGTEMAL 142>NP_065880 Length = 1423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PGSKMALQR 9 P SK +LQ+ Sbjct: 1026 PASKFSLQK 1034>NP_001161707 Length = 2139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PGSKMA 6 PGSKM+ Sbjct: 1125 PGSKMS 1130>NP_001129392 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PGSKMALQR 9 P SK +LQ+ Sbjct: 1026 PASKFSLQK 1034>NP_001193486 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PGSKMALQR 9 P SK +LQ+ Sbjct: 989 PASKFSLQK 997>XP_005260806 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PGSKMAL 7 PG++MAL Sbjct: 136 PGTEMAL 142>XP_005251580 Length = 1422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PGSKMALQR 9 P SK +LQ+ Sbjct: 1025 PASKFSLQK 1033>XP_005263222 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGSKMALQ 8 PGS ALQ Sbjct: 587 PGSASALQ 594>XP_005263221 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGSKMALQ 8 PGS ALQ Sbjct: 587 PGSASALQ 594>XP_005263220 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGSKMALQ 8 PGS ALQ Sbjct: 587 PGSASALQ 594>XP_006714345 Length = 1961 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGSKMALQ 8 PGS ALQ Sbjct: 728 PGSASALQ 735>XP_005263219 Length = 1996 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGSKMALQ 8 PGS ALQ Sbjct: 763 PGSASALQ 770>NP_076419 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PGSKMA 6 PGSK+A Sbjct: 55 PGSKLA 60>NP_001034597 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PGSKMAL 7 PG++MAL Sbjct: 136 PGTEMAL 142Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.126 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 624,317 Number of extensions: 905 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |