Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 20 299 NP_001008895 17 4312 NP_001265442 17 4312 NP_001265443 17 4312 NP_003580 17 4312 NP_009118 16 5631 NP_115921 16 5631 NP_001273283 16 5631 NP_683766 16 5631 NP_001273284 16 5631 NP_002953 16 5631 XP_005266302 16 5631 XP_005267222 16 5631 XP_005245487 16 5631 XP_005245486 16 5631 NP_060616 16 5631 NP_031399 16 7355 NP_001014443 16 7355 NP_036607 16 7355 NP_001255968 16 7355 NP_036440 16 7355 NP_689417 16 7355 NP_001243334 16 7355 XP_006720248 16 7355 XP_005267848 16 7355 XP_006718544 16 7355 XP_006718543 16 7355 XP_006718542 16 7355 XP_006711337 16 7355 NP_060413 16 7355 NP_001245135 15 9605 NP_001245136 15 9605 NP_005419 15 9605 NP_001269973 15 9605 NP_065076 15 9605 NP_115979 15 9605 NP_055062 15 9605 NP_055805 15 9605 NP_001269972 15 9605 NP_001005366 15 9605 NP_919277 15 9605 NP_056295 15 9605 XP_006723662 15 9605 XP_005260825 15 9605 XP_006723661 15 9605 XP_005259699 15 9605 XP_006720343 15 9605 XP_006720167 15 9605 XP_006720166 15 9605 XP_005267550 15 9605 XP_005267549 15 9605 XP_005267548 15 9605 XP_006720165 15 9605 XP_006720164 15 9605 XP_006720163 15 9605 XP_006720162 15 9605 XP_006720161 15 9605 XP_005254018 15 9605 XP_005254013 15 9605 XP_005254012 15 9605 XP_005254011 15 9605 XP_005248564 15 9605 XP_006714485 15 9605 XP_005263418 15 9605 XP_005263417 15 9605 XP_006714484 15 9605 XP_005263416 15 9605 XP_006714483 15 9605 XP_005263415 15 9605 XP_005247378 15 9605 NP_005900 15 9605>NP_115927 Length = 1321 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PGDMKKSSV 9 PGDMKKS V Sbjct: 841 PGDMKKSPV 849>NP_001008895 Length = 759 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PGDMKK 6 PGD+KK Sbjct: 729 PGDLKK 734>NP_001265442 Length = 659 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PGDMKK 6 PGD+KK Sbjct: 629 PGDLKK 634>NP_001265443 Length = 667 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PGDMKK 6 PGD+KK Sbjct: 637 PGDLKK 642>NP_003580 Length = 659 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PGDMKK 6 PGD+KK Sbjct: 629 PGDLKK 634>NP_009118 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GDMKKSSV 9 GD+KK++V Sbjct: 158 GDLKKTAV 165>NP_115921 Length = 1894 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 P D+KKS + Sbjct: 1645 PNDLKKSDL 1653>NP_001273283 Length = 751 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGDMKKSS 8 PG MKK++ Sbjct: 353 PGQMKKTT 360>NP_683766 Length = 926 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGDMKKSS 8 PG MKK++ Sbjct: 528 PGQMKKTT 535>NP_001273284 Length = 855 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGDMKKSS 8 PG MKK++ Sbjct: 457 PGQMKKTT 464>NP_002953 Length = 92 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GDMKKSSV 9 G+MK+SS+ Sbjct: 45 GEMKESSI 52>XP_005266302 Length = 407 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GDMKKSSV 9 GD+KK++V Sbjct: 189 GDLKKTAV 196>XP_005267222 Length = 1819 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 P D+KKS + Sbjct: 1570 PNDLKKSDL 1578>XP_005245487 Length = 110 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GDMKKSSV 9 G+MK+SS+ Sbjct: 63 GEMKESSI 70>XP_005245486 Length = 133 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GDMKKSSV 9 G+MK+SS+ Sbjct: 86 GEMKESSI 93>NP_060616 Length = 420 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 PGD + SSV Sbjct: 99 PGDRRLSSV 107>NP_031399 Length = 582 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGDMKKSS 8 PG KKSS Sbjct: 79 PGTRKKSS 86>NP_001014443 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GDMKKSSV 9 G +KKSSV Sbjct: 471 GSIKKSSV 478>NP_036607 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GDMKKSSV 9 G +KKSSV Sbjct: 471 GSIKKSSV 478>NP_001255968 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGDMKKSS 8 PG KKSS Sbjct: 79 PGTRKKSS 86>NP_036440 Length = 1162 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 PG MK+S V Sbjct: 597 PGRMKQSCV 605>NP_689417 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDMKKSSV 9 GD+KK+ V Sbjct: 155 GDLKKAKV 162>NP_001243334 Length = 723 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 PG MK+S V Sbjct: 158 PGRMKQSCV 166>XP_006720248 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDMKKSSV 9 GD+KK+ V Sbjct: 155 GDLKKAKV 162>XP_005267848 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDMKKSSV 9 GD+KK+ V Sbjct: 155 GDLKKAKV 162>XP_006718544 Length = 1056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 PG MK+S V Sbjct: 491 PGRMKQSCV 499>XP_006718543 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 PG MK+S V Sbjct: 502 PGRMKQSCV 510>XP_006718542 Length = 1145 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 PG MK+S V Sbjct: 580 PGRMKQSCV 588>XP_006711337 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GDMKKSSV 9 G +KKSSV Sbjct: 287 GSIKKSSV 294>NP_060413 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GDMKKSSV 9 GD+KK+ V Sbjct: 155 GDLKKAKV 162>NP_001245135 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PGDMKKSSV 9 PG MKK + Sbjct: 572 PGTMKKDKL 580>NP_001245136 Length = 813 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PGDMKKSSV 9 PG MKK + Sbjct: 540 PGTMKKDKL 548>NP_005419 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PGDMKKSSV 9 PG MKK + Sbjct: 572 PGTMKKDKL 580>NP_001269973 Length = 2083 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>NP_065076 Length = 1873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>NP_115979 Length = 1336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 PG MK+S + Sbjct: 639 PGRMKQSCI 647>NP_055062 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KK+S Sbjct: 492 GDIKKAS 498>NP_055805 Length = 2036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>NP_001269972 Length = 2049 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>NP_001005366 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 PG MK+S + Sbjct: 608 PGRMKQSCI 616>NP_919277 Length = 2083 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>NP_056295 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PGDMKKSS 8 P DM+K S Sbjct: 446 PSDMQKES 453>XP_006723662 Length = 1920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_005260825 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006723661 Length = 1970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_005259699 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PGDMKKSSV 9 PG MKK + Sbjct: 572 PGTMKKDKL 580>XP_006720343 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD++KSS Sbjct: 18 GDVRKSS 24>XP_006720167 Length = 1607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006720166 Length = 2083 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_005267550 Length = 2084 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_005267549 Length = 2130 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_005267548 Length = 2131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006720165 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006720164 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006720163 Length = 2543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006720162 Length = 2589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006720161 Length = 2590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_005254018 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 PG MK+S + Sbjct: 79 PGRMKQSCI 87>XP_005254013 Length = 1299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 PG MK+S + Sbjct: 602 PGRMKQSCI 610>XP_005254012 Length = 1305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 PG MK+S + Sbjct: 608 PGRMKQSCI 616>XP_005254011 Length = 1334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PGDMKKSSV 9 PG MK+S + Sbjct: 639 PGRMKQSCI 647>XP_005248564 Length = 2342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGDMKKSS 8 P D KKSS Sbjct: 610 PKDAKKSS 617>XP_006714485 Length = 1585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KK+S Sbjct: 537 GDIKKAS 543>XP_005263418 Length = 1654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KK+S Sbjct: 647 GDIKKAS 653>XP_005263417 Length = 1660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KK+S Sbjct: 653 GDIKKAS 659>XP_006714484 Length = 1685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KK+S Sbjct: 653 GDIKKAS 659>XP_005263416 Length = 1693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KK+S Sbjct: 653 GDIKKAS 659>XP_006714483 Length = 1695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KK+S Sbjct: 647 GDIKKAS 653>XP_005263415 Length = 1701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GDMKKSS 8 GD+KK+S Sbjct: 653 GDIKKAS 659>XP_005247378 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PGDMKKSS 8 P DM+K S Sbjct: 423 PSDMQKES 430>NP_005900 Length = 2468 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PGDMKKSS 8 P D KKSS Sbjct: 736 PKDAKKSS 743Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.120 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 714,451 Number of extensions: 1195 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |