Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 390 NP_000170 20 390 NP_001268422 20 390 NP_001268423 20 390 XP_005264328 20 390 NP_001364 18 1935 XP_006711798 18 1935 NP_001073922 17 4312 NP_078989 17 4312 XP_005254725 17 4312 XP_005254724 17 4312 XP_005254723 17 4312 NP_065941 16 5631 XP_006720393 16 5631 XP_006720392 16 5631 XP_006720391 16 5631 XP_006713780 16 5631 XP_005247739 16 5631 XP_006713779 16 5631 NP_001136254 16 7355 NP_690864 16 7355 XP_005270794 16 7355 NP_000375 15 9605 NP_490597 15 9605 NP_055114 15 9605 NP_004733 15 9605 NP_001028229 15 9605 NP_056335 15 9605 NP_001277002 15 9605 NP_001258709 15 9605 NP_001129628 15 9605 NP_055629 15 9605 NP_001258708 15 9605 NP_001258710 15 9605 NP_055062 15 9605 NP_817125 15 9605 NP_067547 15 9605 NP_067037 15 9605 NP_060349 15 9605 NP_001277001 15 9605 NP_055725 15 9605 XP_005259108 15 9605 XP_005249317 15 9605 XP_006714485 15 9605 XP_005263418 15 9605 XP_005263417 15 9605 XP_006714484 15 9605 XP_005263416 15 9605 XP_006714483 15 9605 XP_005263415 15 9605 XP_006713494 15 9605 XP_005265676 15 9605 XP_005265675 15 9605 XP_005265631 15 9605 XP_006713477 15 9605 XP_006713476 15 9605 XP_006713475 15 9605 XP_006713474 15 9605 XP_005265625 15 9605 XP_006713473 15 9605 XP_005265621 15 9605 XP_005265620 15 9605 XP_006713472 15 9605 XP_006713471 15 9605 XP_006713470 15 9605 NP_065142 15 9605>NP_001268421 Length = 1230 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PDKISKVVE 9 PDKIS+VVE Sbjct: 672 PDKISEVVE 680>NP_000170 Length = 1360 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PDKISKVVE 9 PDKIS+VVE Sbjct: 802 PDKISEVVE 810>NP_001268422 Length = 1058 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PDKISKVVE 9 PDKIS+VVE Sbjct: 500 PDKISEVVE 508>NP_001268423 Length = 1058 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PDKISKVVE 9 PDKIS+VVE Sbjct: 500 PDKISEVVE 508>XP_005264328 Length = 1261 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PDKISKVVE 9 PDKIS+VVE Sbjct: 703 PDKISEVVE 711>NP_001364 Length = 4515 Score = 17.7 bits (34), Expect = 1935 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 PDKISKVVE 9 PDK++K+++ Sbjct: 2162 PDKLTKIIQ 2170>XP_006711798 Length = 4586 Score = 17.7 bits (34), Expect = 1935 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 PDKISKVVE 9 PDK++K+++ Sbjct: 2184 PDKLTKIIQ 2192>NP_001073922 Length = 2190 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PDKISKVVE 9 PD ISKV++ Sbjct: 1538 PDLISKVLQ 1546>NP_078989 Length = 304 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PDKISKVV 8 PDK+ KV+ Sbjct: 62 PDKLRKVI 69>XP_005254725 Length = 298 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PDKISKVV 8 PDK+ KV+ Sbjct: 62 PDKLRKVI 69>XP_005254724 Length = 338 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PDKISKVV 8 PDK+ KV+ Sbjct: 62 PDKLRKVI 69>XP_005254723 Length = 338 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PDKISKVV 8 PDK+ KV+ Sbjct: 62 PDKLRKVI 69>NP_065941 Length = 905 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 PD SKV+E Sbjct: 293 PDSSSKVLE 301>XP_006720393 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KISKVVE 9 K+SKVVE Sbjct: 457 KVSKVVE 463>XP_006720392 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KISKVVE 9 K+SKVVE Sbjct: 457 KVSKVVE 463>XP_006720391 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KISKVVE 9 K+SKVVE Sbjct: 457 KVSKVVE 463>XP_006713780 Length = 746 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 PD SKV+E Sbjct: 134 PDSSSKVLE 142>XP_005247739 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 PD SKV+E Sbjct: 293 PDSSSKVLE 301>XP_006713779 Length = 904 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 PD SKV+E Sbjct: 292 PDSSSKVLE 300>NP_001136254 Length = 1481 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +V+E Sbjct: 879 PHKIGRVIE 887>NP_690864 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +V+E Sbjct: 879 PHKIGRVIE 887>XP_005270794 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +V+E Sbjct: 879 PHKIGRVIE 887>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PDKISKVV 8 PD +SKV+ Sbjct: 727 PDGVSKVL 734>NP_490597 Length = 1362 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P+K SKV E Sbjct: 344 PEKSSKVSE 352>NP_055114 Length = 722 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P+K SKV E Sbjct: 344 PEKSSKVSE 352>NP_004733 Length = 1256 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1035 PHKIGRIIE 1043>NP_001028229 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1006 PHKIGRIIE 1014>NP_056335 Length = 1287 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1034 PHKIGRIIE 1042>NP_001277002 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 DKISKVVE 9 D+++K++E Sbjct: 71 DRVAKIIE 78>NP_001258709 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DKISKVVE 9 DK++++VE Sbjct: 310 DKVNEIVE 317>NP_001129628 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KISKVVE 9 K+SK+VE Sbjct: 50 KLSKIVE 56>NP_055629 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DKISKVVE 9 DK++++VE Sbjct: 348 DKVNEIVE 355>NP_001258708 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DKISKVVE 9 DK++++VE Sbjct: 401 DKVNEIVE 408>NP_001258710 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DKISKVVE 9 DK++++VE Sbjct: 309 DKVNEIVE 316>NP_055062 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PDKISKVVE 9 PD++SK+ + Sbjct: 669 PDQLSKLAD 677>NP_817125 Length = 140 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PDKISKVVE 9 P+++ KVV+ Sbjct: 19 PERLDKVVD 27>NP_067547 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 DKISKVVE 9 D+++K++E Sbjct: 165 DRVAKIIE 172>NP_067037 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DKISKV 7 DKISKV Sbjct: 259 DKISKV 264>NP_060349 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P+KISK E Sbjct: 198 PNKISKCEE 206>NP_001277001 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 DKISKVVE 9 D+++K++E Sbjct: 165 DRVAKIIE 172>NP_055725 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KISKVVE 9 K+SK+VE Sbjct: 50 KLSKIVE 56>XP_005259108 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P+KISK E Sbjct: 126 PNKISKCEE 134>XP_005249317 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 DKISKVVE 9 D+++K++E Sbjct: 165 DRVAKIIE 172>XP_006714485 Length = 1585 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PDKISKVVE 9 PD++SK+ + Sbjct: 714 PDQLSKLAD 722>XP_005263418 Length = 1654 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PDKISKVVE 9 PD++SK+ + Sbjct: 824 PDQLSKLAD 832>XP_005263417 Length = 1660 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PDKISKVVE 9 PD++SK+ + Sbjct: 830 PDQLSKLAD 838>XP_006714484 Length = 1685 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PDKISKVVE 9 PD++SK+ + Sbjct: 830 PDQLSKLAD 838>XP_005263416 Length = 1693 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PDKISKVVE 9 PD++SK+ + Sbjct: 830 PDQLSKLAD 838>XP_006714483 Length = 1695 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PDKISKVVE 9 PD++SK+ + Sbjct: 824 PDQLSKLAD 832>XP_005263415 Length = 1701 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PDKISKVVE 9 PD++SK+ + Sbjct: 830 PDQLSKLAD 838>XP_006713494 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DKISKVVE 9 DK++++VE Sbjct: 299 DKVNEIVE 306>XP_005265676 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DKISKVVE 9 DK++++VE Sbjct: 299 DKVNEIVE 306>XP_005265675 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DKISKVVE 9 DK++++VE Sbjct: 369 DKVNEIVE 376>XP_005265631 Length = 1288 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1035 PHKIGRIIE 1043>XP_006713477 Length = 1290 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1037 PHKIGRIIE 1045>XP_006713476 Length = 1375 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 919 PHKIGRIIE 927>XP_006713475 Length = 1463 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1007 PHKIGRIIE 1015>XP_006713474 Length = 1465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1009 PHKIGRIIE 1017>XP_005265625 Length = 1478 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1022 PHKIGRIIE 1030>XP_006713473 Length = 1479 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1023 PHKIGRIIE 1031>XP_005265621 Length = 1491 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1035 PHKIGRIIE 1043>XP_005265620 Length = 1492 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1036 PHKIGRIIE 1044>XP_006713472 Length = 1492 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1036 PHKIGRIIE 1044>XP_006713471 Length = 1492 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1036 PHKIGRIIE 1044>XP_006713470 Length = 1493 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PDKISKVVE 9 P KI +++E Sbjct: 1037 PHKIGRIIE 1045>NP_065142 Length = 250 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PDKISKVVE 9 P+++ KVV+ Sbjct: 129 PERLDKVVD 137Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.129 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 433,510 Number of extensions: 775 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |