Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 21 229 XP_005266703 21 229 NP_006370 18 1482 XP_005250170 18 1482 NP_149974 18 1935 NP_001184033 17 4312 NP_005924 17 4312 NP_001243590 17 4312 NP_001243589 17 4312 XP_006723490 17 4312 XP_006723488 17 4312 XP_006723487 17 4312 XP_006723486 17 4312 XP_006718903 17 4312 XP_006718902 17 4312 NP_073580 16 5631 NP_001161212 16 5631 XP_005273285 16 5631 NP_055848 16 7355 NP_705833 16 7355 XP_005251891 16 7355 XP_005251890 16 7355 XP_005251889 16 7355 XP_005251888 16 7355 XP_006717080 16 7355 XP_005251887 16 7355 XP_005251886 16 7355 XP_005251885 16 7355 XP_005251884 16 7355 XP_005251883 16 7355 XP_005251882 16 7355 XP_005251881 16 7355 XP_005251880 16 7355 XP_005251879 16 7355 XP_006717079 16 7355 XP_005251878 16 7355 XP_005251877 16 7355 XP_005251876 16 7355 XP_005251875 16 7355 XP_005251874 16 7355 XP_005251873 16 7355 XP_005251872 16 7355 XP_005247174 16 7355 NP_055719 15 9605 NP_689718 15 9605 NP_620130 15 9605 NP_001273700 15 9605 NP_115593 15 9605 NP_942592 15 9605 XP_006724034 15 9605 XP_006724033 15 9605 XP_006724032 15 9605 XP_006724031 15 9605 XP_005260983 15 9605 XP_006724030 15 9605 XP_006719005 15 9605 XP_005271789 15 9605 XP_005271786 15 9605 XP_005271785 15 9605 XP_005271784 15 9605 XP_005269686 15 9605 XP_005265728 15 9605 XP_005265724 15 9605>NP_443179 Length = 2170 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NVNNVSQDK 9 NVNNVSQD+ Sbjct: 1368 NVNNVSQDQ 1376>XP_005266703 Length = 1501 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NVNNVSQDK 9 NVNNVSQD+ Sbjct: 699 NVNNVSQDQ 707>NP_006370 Length = 751 Score = 18.1 bits (35), Expect = 1482 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NVNNVSQD 8 N+NN+SQ+ Sbjct: 78 NINNISQE 85>XP_005250170 Length = 693 Score = 18.1 bits (35), Expect = 1482 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NVNNVSQD 8 N+NN+SQ+ Sbjct: 20 NINNISQE 27>NP_149974 Length = 484 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NVNNVSQDK 9 N+NN+S D+ Sbjct: 398 NLNNISSDR 406>NP_001184033 Length = 3972 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NNVSQDK 9 NNVS DK Sbjct: 2483 NNVSSDK 2489>NP_005924 Length = 3969 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NNVSQDK 9 NNVS DK Sbjct: 2480 NNVSSDK 2486>NP_001243590 Length = 451 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NVNNVSQDK 9 NV+ VS+DK Sbjct: 123 NVDQVSKDK 131>NP_001243589 Length = 451 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NVNNVSQDK 9 NV+ VS+DK Sbjct: 123 NVDQVSKDK 131>XP_006723490 Length = 438 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NVNNVSQDK 9 NV+ VS+DK Sbjct: 123 NVDQVSKDK 131>XP_006723488 Length = 451 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NVNNVSQDK 9 NV+ VS+DK Sbjct: 123 NVDQVSKDK 131>XP_006723487 Length = 451 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NVNNVSQDK 9 NV+ VS+DK Sbjct: 123 NVDQVSKDK 131>XP_006723486 Length = 451 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NVNNVSQDK 9 NV+ VS+DK Sbjct: 123 NVDQVSKDK 131>XP_006718903 Length = 2673 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NNVSQDK 9 NNVS DK Sbjct: 1184 NNVSSDK 1190>XP_006718902 Length = 2964 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NNVSQDK 9 NNVS DK Sbjct: 1475 NNVSSDK 1481>NP_073580 Length = 369 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NVNNVSQDK 9 N+N +++DK Sbjct: 73 NINKLTEDK 81>NP_001161212 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NVNNVSQDK 9 N+N +++DK Sbjct: 132 NINKLTEDK 140>XP_005273285 Length = 359 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NVNNVSQDK 9 N+N +++DK Sbjct: 132 NINKLTEDK 140>NP_055848 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 508 VNNCAQDR 515>NP_705833 Length = 2970 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVSQDK 9 N+SQDK Sbjct: 850 NISQDK 855>XP_005251891 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 442 VNNCAQDR 449>XP_005251890 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 442 VNNCAQDR 449>XP_005251889 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 442 VNNCAQDR 449>XP_005251888 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 447 VNNCAQDR 454>XP_006717080 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 474 VNNCAQDR 481>XP_005251887 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 474 VNNCAQDR 481>XP_005251886 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 479 VNNCAQDR 486>XP_005251885 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 493 VNNCAQDR 500>XP_005251884 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 493 VNNCAQDR 500>XP_005251883 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 498 VNNCAQDR 505>XP_005251882 Length = 611 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 498 VNNCAQDR 505>XP_005251881 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 503 VNNCAQDR 510>XP_005251880 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 503 VNNCAQDR 510>XP_005251879 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 503 VNNCAQDR 510>XP_006717079 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 507 VNNCAQDR 514>XP_005251878 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 508 VNNCAQDR 515>XP_005251877 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 508 VNNCAQDR 515>XP_005251876 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 521 VNNCAQDR 528>XP_005251875 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 526 VNNCAQDR 533>XP_005251874 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 526 VNNCAQDR 533>XP_005251873 Length = 639 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 526 VNNCAQDR 533>XP_005251872 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VNNVSQDK 9 VNN +QD+ Sbjct: 526 VNNCAQDR 533>XP_005247174 Length = 2679 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVSQDK 9 N+SQDK Sbjct: 559 NISQDK 564>NP_055719 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NVNNVSQDK 9 N+N++ +DK Sbjct: 104 NLNDIFEDK 112>NP_689718 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NVNNVSQDK 9 NV+ +SQ K Sbjct: 99 NVSKISQSK 107>NP_620130 Length = 664 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NNVSQDK 9 NNV +DK Sbjct: 188 NNVDKDK 194>NP_001273700 Length = 2490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NNVSQDK 9 +NVSQD+ Sbjct: 2302 SNVSQDR 2308>NP_115593 Length = 2603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NNVSQDK 9 +NVSQD+ Sbjct: 2415 SNVSQDR 2421>NP_942592 Length = 2352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NNVSQDK 9 +NVSQD+ Sbjct: 2164 SNVSQDR 2170>XP_006724034 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NVNNVSQDK 9 NV+ +SQ K Sbjct: 99 NVSKISQSK 107>XP_006724033 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NVNNVSQDK 9 NV+ +SQ K Sbjct: 99 NVSKISQSK 107>XP_006724032 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NVNNVSQDK 9 NV+ +SQ K Sbjct: 99 NVSKISQSK 107>XP_006724031 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NVNNVSQDK 9 NV+ +SQ K Sbjct: 99 NVSKISQSK 107>XP_005260983 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NVNNVSQDK 9 NV+ +SQ K Sbjct: 99 NVSKISQSK 107>XP_006724030 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NVNNVSQDK 9 NV+ +SQ K Sbjct: 99 NVSKISQSK 107>XP_006719005 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NNVSQDK 9 NNV +DK Sbjct: 191 NNVDKDK 197>XP_005271789 Length = 349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NNVSQDK 9 NNV +DK Sbjct: 191 NNVDKDK 197>XP_005271786 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NNVSQDK 9 NNV +DK Sbjct: 51 NNVDKDK 57>XP_005271785 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NNVSQDK 9 NNV +DK Sbjct: 51 NNVDKDK 57>XP_005271784 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NNVSQDK 9 NNV +DK Sbjct: 191 NNVDKDK 197>XP_005269686 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NVNNVSQDK 9 N+N++ +DK Sbjct: 104 NLNDIFEDK 112>XP_005265728 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NNVSQDK 9 +NVSQD+ Sbjct: 2163 SNVSQDR 2169>XP_005265724 Length = 2602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NNVSQDK 9 +NVSQD+ Sbjct: 2414 SNVSQDR 2420Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.291 0.111 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 470,564 Number of extensions: 750 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |