Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 20 509 NP_001263689 20 509 NP_001119584 20 509 NP_001119586 20 509 NP_001263625 20 509 NP_001119590 20 509 NP_001263690 20 509 NP_001119585 20 509 NP_001263624 20 509 NP_001119588 20 509 NP_001119587 20 509 NP_001119589 20 509 NP_001263627 20 509 NP_001263628 20 509 NP_001263626 20 509 NP_001108451 18 1482 NP_001108454 18 1482 NP_003713 18 1482 NP_001108450 18 1482 NP_001108452 18 1482 NP_001108453 18 1482 NP_001191121 18 1482 NP_001119713 18 1482 NP_001191117 18 1482 NP_001119712 18 1482 NP_001119714 18 1482 NP_005418 18 1482 NP_001191116 18 1482 NP_001191115 18 1482 NP_001191119 18 1482 NP_001191113 18 1482 NP_001191118 18 1482 NP_001191120 18 1482 NP_001191114 18 1482 XP_005247903 18 1482 XP_005247901 18 1482 XP_005247900 18 1482 NP_001002021 18 1935 XP_006724075 18 1935 XP_006724074 18 1935 NP_079162 17 2528 NP_835468 17 4312 NP_001258737 17 4312 NP_001269579 16 5631 XP_005257123 16 5631 NP_001269569 16 7355 NP_001243496 16 7355 NP_001269572 16 7355 NP_071931 16 7355 NP_775873 16 7355 NP_775864 16 7355 NP_001124320 16 7355 NP_004901 16 7355 NP_000741 16 7355 XP_006719585 16 7355 XP_006719584 16 7355 XP_005269101 16 7355 XP_006719583 16 7355 XP_006718285 16 7355 XP_005252949 16 7355 XP_005252948 16 7355 XP_006710047 16 7355 NP_848632 16 7355 NP_058437 15 9605 NP_004798 15 9605 NP_009114 15 9605 NP_001092286 15 9605 XP_006718561 15 9605 XP_005252817 15 9605>NP_000537 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 239 NSSCMGGMN 247>NP_001263689 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 200 NSSCMGGMN 208>NP_001119584 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 239 NSSCMGGMN 247>NP_001119586 Length = 341 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 239 NSSCMGGMN 247>NP_001263625 Length = 302 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 200 NSSCMGGMN 208>NP_001119590 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 200 NSSCMGGMN 208>NP_001263690 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 200 NSSCMGGMN 208>NP_001119585 Length = 346 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 239 NSSCMGGMN 247>NP_001263624 Length = 307 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 200 NSSCMGGMN 208>NP_001119588 Length = 209 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 107 NSSCMGGMN 115>NP_001119587 Length = 261 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 107 NSSCMGGMN 115>NP_001119589 Length = 214 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 107 NSSCMGGMN 115>NP_001263627 Length = 182 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 80 NSSCMGGMN 88>NP_001263628 Length = 187 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 80 NSSCMGGMN 88>NP_001263626 Length = 234 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS MGGMN Sbjct: 80 NSSCMGGMN 88>NP_001108451 Length = 487 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 309 NSSCVGGMN 317>NP_001108454 Length = 393 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 215 NSSCVGGMN 223>NP_003713 Length = 680 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 309 NSSCVGGMN 317>NP_001108450 Length = 555 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 309 NSSCVGGMN 317>NP_001108452 Length = 586 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 215 NSSCVGGMN 223>NP_001108453 Length = 461 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 215 NSSCVGGMN 223>NP_001191121 Length = 565 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 188 NSSCVGGMN 196>NP_001119713 Length = 450 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 210 NSSCVGGMN 218>NP_001191117 Length = 540 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 259 NSSCVGGMN 267>NP_001119712 Length = 587 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 210 NSSCVGGMN 218>NP_001119714 Length = 426 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 210 NSSCVGGMN 218>NP_005418 Length = 636 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 259 NSSCVGGMN 267>NP_001191116 Length = 555 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 259 NSSCVGGMN 267>NP_001191115 Length = 403 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 259 NSSCVGGMN 267>NP_001191119 Length = 506 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 210 NSSCVGGMN 218>NP_001191113 Length = 499 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 259 NSSCVGGMN 267>NP_001191118 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 210 NSSCVGGMN 218>NP_001191120 Length = 491 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 210 NSSCVGGMN 218>NP_001191114 Length = 475 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 259 NSSCVGGMN 267>XP_005247903 Length = 483 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 309 NSSCVGGMN 317>XP_005247901 Length = 663 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 292 NSSCVGGMN 300>XP_005247900 Length = 676 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 NSS +GGMN Sbjct: 309 NSSCVGGMN 317>NP_001002021 Length = 830 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SRMGGMN 9 SR+GGMN Sbjct: 75 SRLGGMN 81>XP_006724075 Length = 830 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SRMGGMN 9 SR+GGMN Sbjct: 75 SRLGGMN 81>XP_006724074 Length = 853 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SRMGGMN 9 SR+GGMN Sbjct: 75 SRLGGMN 81>NP_079162 Length = 257 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NSSRMGG 7 NSSR+GG Sbjct: 38 NSSRLGG 44>NP_835468 Length = 311 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSRMGGMN 9 SSR+ GMN Sbjct: 201 SSRVSGMN 208>NP_001258737 Length = 200 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSRMGGMN 9 SSR+ GMN Sbjct: 90 SSRVSGMN 97>NP_001269579 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSRMGG 7 SSRMGG Sbjct: 37 SSRMGG 42>XP_005257123 Length = 803 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NSSRMGG 7 N++RMGG Sbjct: 207 NNARMGG 213>NP_001269569 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NSSRMGGM 8 +SSR+GG+ Sbjct: 254 HSSRLGGV 261>NP_001243496 Length = 231 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSSRMGGMN 9 NSSR G+N Sbjct: 93 NSSRYEGVN 101>NP_001269572 Length = 722 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NSSRMGGM 8 +SSR+GG+ Sbjct: 254 HSSRLGGV 261>NP_071931 Length = 747 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NSSRMGGM 8 +SSR+GG+ Sbjct: 254 HSSRLGGV 261>NP_775873 Length = 1576 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSRMGGM 8 SSR GGM Sbjct: 755 SSRTGGM 761>NP_775864 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMGGMN 9 R+GGMN Sbjct: 940 RIGGMN 945>NP_001124320 Length = 1243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSRMGGMN 9 SSR G MN Sbjct: 588 SSRRGSMN 595>NP_004901 Length = 1244 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SSRMGGMN 9 SSR G MN Sbjct: 588 SSRRGSMN 595>NP_000741 Length = 498 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NSSRMGGMN 9 NSSR G+N Sbjct: 93 NSSRYEGVN 101>XP_006719585 Length = 1459 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSRMGGM 8 SSR GGM Sbjct: 638 SSRTGGM 644>XP_006719584 Length = 1515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSRMGGM 8 SSR GGM Sbjct: 694 SSRTGGM 700>XP_005269101 Length = 1577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSRMGGM 8 SSR GGM Sbjct: 756 SSRTGGM 762>XP_006719583 Length = 1586 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSRMGGM 8 SSR GGM Sbjct: 765 SSRTGGM 771>XP_006718285 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SSRMGGM 8 SSR GGM Sbjct: 36 SSRTGGM 42>XP_005252949 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMGGMN 9 R+GGMN Sbjct: 976 RVGGMN 981>XP_005252948 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMGGMN 9 R+GGMN Sbjct: 944 RVGGMN 949>XP_006710047 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSRMGGMN 9 SSR+GG++ Sbjct: 14 SSRVGGLS 21>NP_848632 Length = 1039 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMGGMN 9 R+GGMN Sbjct: 976 RVGGMN 981>NP_058437 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NSSRMGG 7 +SSR+GG Sbjct: 344 SSSRLGG 350>NP_004798 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NSSRMGGM 8 NS+R GG+ Sbjct: 320 NSTRAGGV 327>NP_009114 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 +SSR GG++ Sbjct: 222 SSSRAGGLD 230>NP_001092286 Length = 2769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSRMGGMN 9 SSR+ G+N Sbjct: 1877 SSRLNGVN 1884>XP_006718561 Length = 2794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSRMGGMN 9 SSR+ G+N Sbjct: 1902 SSRLNGVN 1909>XP_005252817 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NSSRMGGMN 9 +SSR GG++ Sbjct: 237 SSSRAGGLD 245Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.118 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 600,357 Number of extensions: 1124 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |