Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_958441 20 390 NP_958439 20 390 NP_958440 20 390 NP_005219 20 390 NP_542391 17 3301 XP_005250749 17 3301 XP_006716239 17 3301 NP_064504 17 4312 NP_078901 17 4312 XP_005250558 17 4312 NP_001973 16 5631 NP_599023 16 7355 NP_599022 16 7355 NP_689969 16 7355 NP_001272368 16 7355 NP_775099 16 7355 NP_056472 16 7355 NP_599024 16 7355 NP_002934 16 7355 NP_071926 16 7355 XP_005254641 16 7355 XP_005268557 16 7355 XP_006714856 16 7355 XP_005268556 16 7355 XP_006714855 16 7355 XP_006714854 16 7355 XP_005268555 16 7355 XP_005268554 16 7355 XP_006714526 16 7355 NP_001036064 15 9605 NP_005226 15 9605 NP_003627 15 9605 NP_001186791 15 9605 NP_001013433 15 9605 NP_742128 15 9605 NP_001186792 15 9605 NP_060785 15 9605 NP_361014 15 9605 NP_001186789 15 9605 NP_001186790 15 9605 NP_001036009 15 9605 NP_001036010 15 9605 NP_003564 15 9605 XP_005260237 15 9605 XP_005246434 15 9605 XP_005246433 15 9605 XP_005246432 15 9605 XP_006712427 15 9605 XP_005263571 15 9605 XP_005263570 15 9605 XP_005263569 15 9605 XP_005263568 15 9605 NP_478126 15 9605>NP_958441 Length = 705 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LTKIICAQ 9 LTKIICAQ Sbjct: 210 LTKIICAQ 217>NP_958439 Length = 628 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LTKIICAQ 9 LTKIICAQ Sbjct: 210 LTKIICAQ 217>NP_958440 Length = 405 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LTKIICAQ 9 LTKIICAQ Sbjct: 210 LTKIICAQ 217>NP_005219 Length = 1210 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LTKIICAQ 9 LTKIICAQ Sbjct: 210 LTKIICAQ 217>NP_542391 Length = 300 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTKIICA 8 LTK++CA Sbjct: 10 LTKVLCA 16>XP_005250749 Length = 226 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTKIICA 8 LTK++CA Sbjct: 10 LTKVLCA 16>XP_006716239 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTKIICA 8 LTK++CA Sbjct: 10 LTKVLCA 16>NP_064504 Length = 902 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTKIICA 8 +TKI+CA Sbjct: 10 ITKILCA 16>NP_078901 Length = 699 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTKIICA 8 +TKI+CA Sbjct: 10 ITKILCA 16>XP_005250558 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTKIICA 8 +TKI+CA Sbjct: 10 ITKILCA 16>NP_001973 Length = 1342 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LTKIICA 8 LTK ICA Sbjct: 205 LTKTICA 211>NP_599023 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTKIIC 7 LTK+IC Sbjct: 467 LTKLIC 472>NP_599022 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTKIIC 7 LTK+IC Sbjct: 500 LTKLIC 505>NP_689969 Length = 1708 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NLTKIIC 7 N TK++C Sbjct: 62 NFTKLLC 68>NP_001272368 Length = 1732 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NLTKIIC 7 N TK++C Sbjct: 62 NFTKLLC 68>NP_775099 Length = 2595 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLTKIIC 7 NLT+++C Sbjct: 435 NLTELLC 441>NP_056472 Length = 2277 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLTKIIC 7 NLT+++C Sbjct: 117 NLTELLC 123>NP_599024 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTKIIC 7 LTK+IC Sbjct: 412 LTKLIC 417>NP_002934 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTKIIC 7 LTK+IC Sbjct: 492 LTKLIC 497>NP_071926 Length = 1544 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 NLTKIICAQ 9 N+T+++C + Sbjct: 632 NMTQLLCVE 640>XP_005254641 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTKIIC 7 LTK+IC Sbjct: 421 LTKLIC 426>XP_005268557 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 NLTKIICAQ 9 N+T+++C + Sbjct: 632 NMTQLLCVE 640>XP_006714856 Length = 1346 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 NLTKIICAQ 9 N+T+++C + Sbjct: 434 NMTQLLCVE 442>XP_005268556 Length = 1466 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 NLTKIICAQ 9 N+T+++C + Sbjct: 554 NMTQLLCVE 562>XP_006714855 Length = 1473 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 NLTKIICAQ 9 N+T+++C + Sbjct: 632 NMTQLLCVE 640>XP_006714854 Length = 1486 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 NLTKIICAQ 9 N+T+++C + Sbjct: 574 NMTQLLCVE 582>XP_005268555 Length = 1524 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 NLTKIICAQ 9 N+T+++C + Sbjct: 632 NMTQLLCVE 640>XP_005268554 Length = 1531 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 NLTKIICAQ 9 N+T+++C + Sbjct: 632 NMTQLLCVE 640>XP_006714526 Length = 1670 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NLTKIIC 7 N TK++C Sbjct: 62 NFTKLLC 68>NP_001036064 Length = 1292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTKIICAQ 9 LT+ +CA+ Sbjct: 208 LTRTVCAE 215>NP_005226 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTKIICAQ 9 LT+ +CA+ Sbjct: 208 LTRTVCAE 215>NP_003627 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NLTKIICAQ 9 NLT IC Q Sbjct: 206 NLTPPICEQ 214>NP_001186791 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NLTKIICAQ 9 NLT IC Q Sbjct: 254 NLTPPICEQ 262>NP_001013433 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 TKIICA 8 TK++CA Sbjct: 562 TKLVCA 567>NP_742128 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NLTKIICAQ 9 NLT IC Q Sbjct: 192 NLTPPICEQ 200>NP_001186792 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NLTKIICAQ 9 NLT IC Q Sbjct: 139 NLTPPICEQ 147>NP_060785 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 TKIICA 8 TK++CA Sbjct: 600 TKLVCA 605>NP_361014 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 TKIICA 8 TK++CA Sbjct: 680 TKLVCA 685>NP_001186789 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NLTKIICAQ 9 NLT IC Q Sbjct: 206 NLTPPICEQ 214>NP_001186790 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NLTKIICAQ 9 NLT IC Q Sbjct: 206 NLTPPICEQ 214>NP_001036009 Length = 1624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NLTKIIC 7 N+TK IC Sbjct: 425 NITKQIC 431>NP_001036010 Length = 1557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NLTKIIC 7 N+TK IC Sbjct: 358 NITKQIC 364>NP_003564 Length = 1587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NLTKIIC 7 N+TK IC Sbjct: 388 NITKQIC 394>XP_005260237 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KIICAQ 9 KIICA+ Sbjct: 65 KIICAE 70>XP_005246434 Length = 1282 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTKIICAQ 9 LT+ +CA+ Sbjct: 208 LTRTVCAE 215>XP_005246433 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTKIICAQ 9 LT+ +CA+ Sbjct: 208 LTRTVCAE 215>XP_005246432 Length = 1307 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTKIICAQ 9 LT+ +CA+ Sbjct: 208 LTRTVCAE 215>XP_006712427 Length = 1323 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTKIICAQ 9 LT+ +CA+ Sbjct: 208 LTRTVCAE 215>XP_005263571 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NLTKIICAQ 9 NLT IC Q Sbjct: 192 NLTPPICEQ 200>XP_005263570 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NLTKIICAQ 9 NLT IC Q Sbjct: 206 NLTPPICEQ 214>XP_005263569 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NLTKIICAQ 9 NLT IC Q Sbjct: 206 NLTPPICEQ 214>XP_005263568 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NLTKIICAQ 9 NLT IC Q Sbjct: 206 NLTPPICEQ 214>NP_478126 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 TKIICA 8 TK++CA Sbjct: 60 TKVLCA 65Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.135 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 559,106 Number of extensions: 757 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |