Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 299 XP_005271621 20 299 XP_006718907 20 299 XP_006718906 20 299 XP_005271619 20 299 XP_005271618 20 299 NP_073609 16 5631 NP_001076593 16 5631 NP_001009612 16 5631 XP_006718339 16 5631 XP_006718338 16 5631 XP_006718337 16 5631 XP_006718336 16 5631 XP_005272574 16 5631 NP_001177951 16 7355 NP_006556 16 7355 NP_055840 16 7355 NP_005099 16 7355 NP_065789 16 7355 XP_005255832 16 7355 XP_005254442 16 7355 XP_006713513 16 7355 XP_006713512 16 7355 XP_006713511 16 7355 XP_006711931 16 7355 XP_006711930 16 7355 XP_006711929 16 7355 XP_006711928 16 7355 XP_006711927 16 7355 XP_006711926 16 7355 XP_006711925 16 7355 NP_002364 16 7355 NP_001035203 15 9605 NP_074035 15 9605 NP_001035202 15 9605 NP_002465 15 9605 NP_001078921 15 9605 NP_573400 15 9605 NP_008981 15 9605 NP_056482 15 9605 NP_001092880 15 9605 NP_001092881 15 9605 NP_055525 15 9605 NP_001171656 15 9605 NP_778255 15 9605 NP_001191449 15 9605 NP_001191448 15 9605 NP_065928 15 9605 NP_002552 15 9605 NP_001107013 15 9605 XP_006723752 15 9605 XP_006723751 15 9605 XP_006723750 15 9605 XP_006723749 15 9605 XP_006723748 15 9605 XP_005256527 15 9605 XP_006716914 15 9605 NP_001138668 15 9605>NP_000042 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLMQVEDQS 9 NLM+VEDQS Sbjct: 845 NLMEVEDQS 853>XP_005271621 Length = 2708 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLMQVEDQS 9 NLM+VEDQS Sbjct: 497 NLMEVEDQS 505>XP_006718907 Length = 3050 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLMQVEDQS 9 NLM+VEDQS Sbjct: 845 NLMEVEDQS 853>XP_006718906 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLMQVEDQS 9 NLM+VEDQS Sbjct: 845 NLMEVEDQS 853>XP_005271619 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLMQVEDQS 9 NLM+VEDQS Sbjct: 845 NLMEVEDQS 853>XP_005271618 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NLMQVEDQS 9 NLM+VEDQS Sbjct: 845 NLMEVEDQS 853>NP_073609 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMQVEDQS 9 L+QV DQS Sbjct: 93 LLQVNDQS 100>NP_001076593 Length = 1347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NLMQVEDQS 9 +LMQ++D+S Sbjct: 622 DLMQLQDES 630>NP_001009612 Length = 122 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MQVEDQS 9 MQ++DQS Sbjct: 48 MQIQDQS 54>XP_006718339 Length = 546 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMQVEDQS 9 L+QV DQS Sbjct: 93 LLQVNDQS 100>XP_006718338 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMQVEDQS 9 L+QV DQS Sbjct: 93 LLQVNDQS 100>XP_006718337 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMQVEDQS 9 L+QV DQS Sbjct: 93 LLQVNDQS 100>XP_006718336 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMQVEDQS 9 L+QV DQS Sbjct: 93 LLQVNDQS 100>XP_005272574 Length = 1207 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NLMQVEDQS 9 +LMQ++D+S Sbjct: 482 DLMQLQDES 490>NP_001177951 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LMQVEDQS 9 ++QVEDQ+ Sbjct: 342 IIQVEDQN 349>NP_006556 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LMQVEDQS 9 ++QVEDQ+ Sbjct: 670 IIQVEDQN 677>NP_055840 Length = 1184 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLMQVEDQ 8 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>NP_005099 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NLMQVEDQ 8 NL+Q++D+ Sbjct: 220 NLLQIQDK 227>NP_065789 Length = 1771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLMQVEDQS 9 NL+++ED S Sbjct: 1613 NLIELEDDS 1621>XP_005255832 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LMQVEDQS 9 ++QVEDQ+ Sbjct: 668 IIQVEDQN 675>XP_005254442 Length = 3041 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLMQVEDQS 9 +LMQ ED S Sbjct: 1477 HLMQAEDTS 1485>XP_006713513 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NLMQVEDQ 8 NL+Q++D+ Sbjct: 83 NLLQIQDK 90>XP_006713512 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NLMQVEDQ 8 NL+Q++D+ Sbjct: 220 NLLQIQDK 227>XP_006713511 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NLMQVEDQ 8 NL+Q++D+ Sbjct: 193 NLLQIQDK 200>XP_006711931 Length = 1162 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLMQVEDQ 8 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>XP_006711930 Length = 1186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLMQVEDQ 8 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>XP_006711929 Length = 1186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLMQVEDQ 8 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>XP_006711928 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLMQVEDQ 8 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>XP_006711927 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLMQVEDQ 8 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>XP_006711926 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLMQVEDQ 8 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>XP_006711925 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NLMQVEDQ 8 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>NP_002364 Length = 2803 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLMQVEDQS 9 +LMQ ED S Sbjct: 1239 HLMQAEDTS 1247>NP_001035203 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMQVEDQ 8 L+QVED+ Sbjct: 1862 LLQVEDE 1868>NP_074035 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMQVEDQ 8 L+QVED+ Sbjct: 1855 LLQVEDE 1861>NP_001035202 Length = 1945 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMQVEDQ 8 L+QVED+ Sbjct: 1862 LLQVEDE 1868>NP_002465 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMQVEDQ 8 L+QVED+ Sbjct: 1855 LLQVEDE 1861>NP_001078921 Length = 1361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLMQVEDQS 9 +LMQ+ D+S Sbjct: 636 DLMQLRDES 644>NP_573400 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLMQVEDQ 8 NL+Q E+Q Sbjct: 1144 NLVQTEEQ 1151>NP_008981 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLMQVEDQ 8 NL+Q E+Q Sbjct: 1125 NLVQTEEQ 1132>NP_056482 Length = 1347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLMQVEDQS 9 +LMQ+ D+S Sbjct: 622 DLMQLRDES 630>NP_001092880 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MQVEDQS 9 +QVED+S Sbjct: 427 LQVEDES 433>NP_001092881 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MQVEDQS 9 +QVED+S Sbjct: 427 LQVEDES 433>NP_055525 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MQVEDQS 9 +QVED+S Sbjct: 427 LQVEDES 433>NP_001171656 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MQVEDQS 9 +QVED+S Sbjct: 427 LQVEDES 433>NP_778255 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLMQVEDQS 9 N+M V+D+S Sbjct: 182 NVMDVKDRS 190>NP_001191449 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLMQVEDQS 9 N+M V+D+S Sbjct: 183 NVMDVKDRS 191>NP_001191448 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLMQVEDQS 9 N+M V+D+S Sbjct: 206 NVMDVKDRS 214>NP_065928 Length = 4427 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLMQVED 7 NL+++ED Sbjct: 423 NLLEIED 429>NP_002552 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLMQVEDQS 9 N+M V+D+S Sbjct: 207 NVMDVKDRS 215>NP_001107013 Length = 1347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLMQVEDQS 9 +LMQ+ D+S Sbjct: 622 DLMQLRDES 630>XP_006723752 Length = 1387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLMQVEDQ 8 NL+Q E+Q Sbjct: 1071 NLVQTEEQ 1078>XP_006723751 Length = 1427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLMQVEDQ 8 NL+Q E+Q Sbjct: 1111 NLVQTEEQ 1118>XP_006723750 Length = 1427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLMQVEDQ 8 NL+Q E+Q Sbjct: 1111 NLVQTEEQ 1118>XP_006723749 Length = 1428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLMQVEDQ 8 NL+Q E+Q Sbjct: 1112 NLVQTEEQ 1119>XP_006723748 Length = 1437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLMQVEDQ 8 NL+Q E+Q Sbjct: 1121 NLVQTEEQ 1128>XP_005256527 Length = 4427 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NLMQVED 7 NL+++ED Sbjct: 423 NLLEIED 429>XP_006716914 Length = 848 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLMQVEDQS 9 +LMQ+ D+S Sbjct: 123 DLMQLRDES 131>NP_001138668 Length = 1343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLMQVEDQS 9 +LMQ+ D+S Sbjct: 618 DLMQLRDES 626Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.116 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 548,842 Number of extensions: 975 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |