Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_056169 17 2528 NP_714928 17 4312 XP_005248009 17 4312 XP_006713930 17 4312 XP_006713929 17 4312 XP_006713928 17 4312 NP_001495 16 5631 NP_001136269 16 5631 XP_005262313 16 5631 NP_001182371 16 7355 NP_115818 16 7355 NP_001005408 16 7355 NP_996920 15 9605 NP_996919 15 9605 NP_996921 15 9605 NP_003196 15 9605 NP_008835 15 9605 NP_001075109 15 9605 NP_001188386 15 9605 NP_938207 15 9605 NP_112562 15 9605 NP_060619 15 9605 NP_057263 15 9605 NP_001034977 15 9605 NP_001129430 15 9605 NP_001129428 15 9605 NP_001129427 15 9605 NP_003297 15 9605 NP_006505 15 9605 XP_006722331 15 9605 XP_006722041 15 9605 XP_005257576 15 9605 XP_006722040 15 9605 XP_006722039 15 9605 XP_005257575 15 9605 XP_005254670 15 9605 XP_006720722 15 9605 XP_006720721 15 9605 XP_005265428 15 9605 XP_005277448 15 9605 XP_006711342 15 9605 NP_001013373 15 9605 NP_001129429 15 9605>NP_056169 Length = 1749 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LLGRTALR 9 LLGR+ALR Sbjct: 20 LLGRSALR 27>NP_714928 Length = 992 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLGRTALR 9 LLGR ALR Sbjct: 15 LLGRDALR 22>XP_005248009 Length = 535 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLGRTALR 9 LLGR ALR Sbjct: 15 LLGRDALR 22>XP_006713930 Length = 772 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLGRTALR 9 LLGR ALR Sbjct: 15 LLGRDALR 22>XP_006713929 Length = 930 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLGRTALR 9 LLGR ALR Sbjct: 15 LLGRDALR 22>XP_006713928 Length = 931 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLGRTALR 9 LLGR ALR Sbjct: 15 LLGRDALR 22>NP_001495 Length = 368 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LGRTALR 9 +GRTALR Sbjct: 210 VGRTALR 216>NP_001136269 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LGRTALR 9 +GRTALR Sbjct: 257 VGRTALR 263>XP_005262313 Length = 378 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LGRTALR 9 +GRTALR Sbjct: 220 VGRTALR 226>NP_001182371 Length = 89 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LGRTALR 9 LGR+ALR Sbjct: 53 LGRSALR 59>NP_115818 Length = 1562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GRTALR 9 GRTALR Sbjct: 537 GRTALR 542Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GRTALR 9 GRTALR Sbjct: 733 GRTALR 738>NP_001005408 Length = 1560 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GRTALR 9 GRTALR Sbjct: 537 GRTALR 542Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GRTALR 9 GRTALR Sbjct: 733 GRTALR 738>NP_996920 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLGRTALR 9 NL+G+T+ R Sbjct: 106 NLMGKTSER 114>NP_996919 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLGRTALR 9 NL+G+T+ R Sbjct: 106 NLMGKTSER 114>NP_996921 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLGRTALR 9 NL+G+T+ R Sbjct: 106 NLMGKTSER 114>NP_003196 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLGRTALR 9 NL+G+T+ R Sbjct: 106 NLMGKTSER 114>NP_008835 Length = 4128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLLGRT 6 N+LGRT Sbjct: 4115 NILGRT 4120>NP_001075109 Length = 4097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLLGRT 6 N+LGRT Sbjct: 4084 NILGRT 4089>NP_001188386 Length = 1497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLLGRTAL 8 N LG+TAL Sbjct: 53 NSLGQTAL 60>NP_938207 Length = 1491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLLGRTAL 8 N LG+TAL Sbjct: 53 NSLGQTAL 60>NP_112562 Length = 1451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLLGRTAL 8 N LG+TAL Sbjct: 53 NSLGQTAL 60>NP_060619 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLGRTALR 9 + G+TALR Sbjct: 52 IFGKTALR 59>NP_057263 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRTAL 8 LGRTAL Sbjct: 69 LGRTAL 74>NP_001034977 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRTAL 8 LGRTAL Sbjct: 76 LGRTAL 81>NP_001129430 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRTAL 8 LGRTAL Sbjct: 69 LGRTAL 74>NP_001129428 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRTAL 8 LGRTAL Sbjct: 69 LGRTAL 74>NP_001129427 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRTAL 8 LGRTAL Sbjct: 69 LGRTAL 74>NP_003297 Length = 982 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRTAL 8 LGRTAL Sbjct: 69 LGRTAL 74>NP_006505 Length = 1956 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLGRTALR 9 NL+ RTA++ Sbjct: 117 NLIRRTAIK 125>XP_006722331 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LGRTALR 9 LGR ALR Sbjct: 51 LGRAALR 57>XP_006722041 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLLGRTAL 8 N LG+TAL Sbjct: 56 NSLGQTAL 63>XP_005257576 Length = 1454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLLGRTAL 8 N LG+TAL Sbjct: 56 NSLGQTAL 63>XP_006722040 Length = 1466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLLGRTAL 8 N LG+TAL Sbjct: 56 NSLGQTAL 63>XP_006722039 Length = 1491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLLGRTAL 8 N LG+TAL Sbjct: 53 NSLGQTAL 60>XP_005257575 Length = 1494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLLGRTAL 8 N LG+TAL Sbjct: 56 NSLGQTAL 63>XP_005254670 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLGRTALR 9 NL+G+T+ R Sbjct: 48 NLMGKTSER 56>XP_006720722 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLGRTALR 9 NL+G+T+ R Sbjct: 106 NLMGKTSER 114>XP_006720721 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLGRTALR 9 NL+G+T+ R Sbjct: 106 NLMGKTSER 114>XP_005265428 Length = 1959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NLLGRTALR 9 NL+ RTA++ Sbjct: 117 NLIRRTAIK 125>XP_005277448 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRTAL 8 LGRTAL Sbjct: 76 LGRTAL 81>XP_006711342 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRTAL 8 LGRTAL Sbjct: 76 LGRTAL 81>NP_001013373 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NLLGRTAL 8 +LLG TAL Sbjct: 38 SLLGNTAL 45>NP_001129429 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGRTAL 8 LGRTAL Sbjct: 69 LGRTAL 74Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.144 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 390,732 Number of extensions: 468 Number of successful extensions: 45 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |