Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 229 NP_001075109 21 229 NP_955452 17 2528 XP_006713543 17 2528 NP_003493 17 4312 NP_851393 17 4312 XP_005255667 17 4312 XP_005255666 17 4312 XP_005255665 17 4312 XP_005255664 17 4312 NP_005273 17 4312 NP_078782 16 5631 NP_001273352 16 5631 NP_004646 16 5631 NP_001363 16 5631 XP_005257776 16 5631 XP_005246907 16 5631 NP_004653 16 5631 YP_003024036 16 5631 NP_002038 16 7355 NP_064425 16 7355 NP_001001290 16 7355 NP_899243 16 7355 NP_056121 16 7355 XP_006720135 16 7355 XP_006720134 16 7355 XP_006720133 16 7355 XP_006715749 16 7355 XP_006714032 16 7355 XP_006714031 16 7355 XP_005270747 16 7355 XP_006710574 16 7355 XP_005270746 16 7355 NP_005623 15 9605 NP_001132914 15 9605 NP_001138238 15 9605 NP_003306 15 9605 NP_115524 15 9605 XP_006722117 15 9605 XP_006722116 15 9605 XP_006722115 15 9605 XP_006722114 15 9605 XP_006722113 15 9605 XP_005255575 15 9605 XP_005255574 15 9605 XP_005255573 15 9605 XP_006720998 15 9605 XP_005255571 15 9605 XP_006720997 15 9605 XP_006720996 15 9605 XP_006720995 15 9605 XP_006720994 15 9605 XP_005269237 15 9605 XP_005269236 15 9605 XP_005269235 15 9605 XP_006719693 15 9605 XP_005269233 15 9605 XP_005251785 15 9605 XP_005251786 15 9605 XP_006717030 15 9605 XP_006717029 15 9605 NP_003792 15 9605>NP_008835 Length = 4128 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NLFRTFLGE 9 NLFR FLGE Sbjct: 195 NLFRAFLGE 203>NP_001075109 Length = 4097 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NLFRTFLGE 9 NLFR FLGE Sbjct: 195 NLFRAFLGE 203>NP_955452 Length = 2590 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLFRTFLGE 9 NLF+TF+ E Sbjct: 1835 NLFQTFIKE 1843>XP_006713543 Length = 2591 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NLFRTFLGE 9 NLF+TF+ E Sbjct: 1836 NLFQTFIKE 1844>NP_003493 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLFRTFL 7 +LFRTFL Sbjct: 100 SLFRTFL 106>NP_851393 Length = 826 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLFRTFL 7 +LFRTFL Sbjct: 100 SLFRTFL 106>XP_005255667 Length = 473 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLFRTFL 7 +LFRTFL Sbjct: 149 SLFRTFL 155>XP_005255666 Length = 862 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLFRTFL 7 +LFRTFL Sbjct: 100 SLFRTFL 106>XP_005255665 Length = 875 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLFRTFL 7 +LFRTFL Sbjct: 149 SLFRTFL 155>XP_005255664 Length = 911 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NLFRTFL 7 +LFRTFL Sbjct: 149 SLFRTFL 155>NP_005273 Length = 362 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLFRTFLG 8 NL+R F+G Sbjct: 182 NLYRVFVG 189>NP_078782 Length = 654 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LFRTFLGE 9 LFR LGE Sbjct: 204 LFRALLGE 211>NP_001273352 Length = 654 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LFRTFLGE 9 LFR LGE Sbjct: 204 LFRALLGE 211>NP_004646 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFRTFL 7 LFRTFL Sbjct: 94 LFRTFL 99>NP_001363 Length = 4486 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFRTFLGE 9 L RT+LGE Sbjct: 4126 LCRTYLGE 4133>XP_005257776 Length = 778 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFRTFL 7 LFRTFL Sbjct: 94 LFRTFL 99>XP_005246907 Length = 654 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LFRTFLGE 9 LFR LGE Sbjct: 204 LFRALLGE 211>NP_004653 Length = 798 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LFRTFLGE 9 L RT+LGE Sbjct: 438 LCRTYLGE 445>YP_003024036 Length = 603 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NLFRTFLG 8 NLF+ F+G Sbjct: 136 NLFQLFIG 143>NP_002038 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LFRTFLG 8 +F+TF+G Sbjct: 281 MFKTFIG 287>NP_064425 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRTFLGE 9 F+TFLG+ Sbjct: 273 FQTFLGK 279>NP_001001290 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRTFLGE 9 F+TFLG+ Sbjct: 244 FQTFLGK 250>NP_899243 Length = 1977 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLFRTFLGE 9 NLF T +GE Sbjct: 693 NLFYTQIGE 701>NP_056121 Length = 2620 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLFRTF 6 NLF+TF Sbjct: 790 NLFKTF 795>XP_006720135 Length = 1454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLFRTFLGE 9 NLF T +GE Sbjct: 693 NLFYTQIGE 701>XP_006720134 Length = 1579 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLFRTFLGE 9 NLF T +GE Sbjct: 693 NLFYTQIGE 701>XP_006720133 Length = 1969 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NLFRTFLGE 9 NLF T +GE Sbjct: 693 NLFYTQIGE 701>XP_006715749 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LFRTFLG 8 +F+TF+G Sbjct: 158 MFKTFIG 164>XP_006714032 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRTFLGE 9 F+TFLG+ Sbjct: 244 FQTFLGK 250>XP_006714031 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FRTFLGE 9 F+TFLG+ Sbjct: 273 FQTFLGK 279>XP_005270747 Length = 2025 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLFRTF 6 NLF+TF Sbjct: 195 NLFKTF 200>XP_006710574 Length = 2445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLFRTF 6 NLF+TF Sbjct: 615 NLFKTF 620>XP_005270746 Length = 2443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLFRTF 6 NLF+TF Sbjct: 615 NLFKTF 620>NP_005623 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FRTFLGE 9 FR FLG+ Sbjct: 55 FRNFLGK 61>NP_001132914 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NLFRTFLG 8 NLF FLG Sbjct: 644 NLFIRFLG 651>NP_001138238 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 NLFRTFLG 8 N+F+ F G Sbjct: 411 NIFKAFFG 418>NP_003306 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 NLFRTFLG 8 N+F+ F G Sbjct: 467 NIFKAFFG 474>NP_115524 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FRTFLG 8 FRTF G Sbjct: 456 FRTFFG 461>XP_006722117 Length = 401 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 NLFRTFLG 8 N+F+ F G Sbjct: 355 NIFKAFFG 362>XP_006722116 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 NLFRTFLG 8 N+F+ F G Sbjct: 411 NIFKAFFG 418>XP_006722115 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 NLFRTFLG 8 N+F+ F G Sbjct: 411 NIFKAFFG 418>XP_006722114 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 NLFRTFLG 8 N+F+ F G Sbjct: 411 NIFKAFFG 418>XP_006722113 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 NLFRTFLG 8 N+F+ F G Sbjct: 467 NIFKAFFG 474>XP_005255575 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FRTFLGE 9 FR FLG+ Sbjct: 55 FRNFLGK 61>XP_005255574 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FRTFLGE 9 FR FLG+ Sbjct: 55 FRNFLGK 61>XP_005255573 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FRTFLGE 9 FR FLG+ Sbjct: 55 FRNFLGK 61>XP_006720998 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FRTFLGE 9 FR FLG+ Sbjct: 123 FRNFLGK 129>XP_005255571 Length = 1112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FRTFLGE 9 FR FLG+ Sbjct: 81 FRNFLGK 87>XP_006720997 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FRTFLGE 9 FR FLG+ Sbjct: 93 FRNFLGK 99>XP_006720996 Length = 1153 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FRTFLGE 9 FR FLG+ Sbjct: 122 FRNFLGK 128>XP_006720995 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FRTFLGE 9 FR FLG+ Sbjct: 123 FRNFLGK 129>XP_006720994 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FRTFLGE 9 FR FLG+ Sbjct: 123 FRNFLGK 129>XP_005269237 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FRTFLG 8 FRTF G Sbjct: 456 FRTFFG 461>XP_005269236 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FRTFLG 8 FRTF G Sbjct: 456 FRTFFG 461>XP_005269235 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FRTFLG 8 FRTF G Sbjct: 456 FRTFFG 461>XP_006719693 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FRTFLG 8 FRTF G Sbjct: 456 FRTFFG 461>XP_005269233 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FRTFLG 8 FRTF G Sbjct: 456 FRTFFG 461>XP_005251785 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NLFRTFLG 8 NLF FLG Sbjct: 321 NLFIRFLG 328>XP_005251786 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NLFRTFLG 8 NLF FLG Sbjct: 367 NLFIRFLG 374>XP_006717030 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NLFRTFLG 8 NLF FLG Sbjct: 554 NLFIRFLG 561>XP_006717029 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NLFRTFLG 8 NLF FLG Sbjct: 554 NLFIRFLG 561>NP_003792 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NLFRTF 6 NLF+TF Sbjct: 253 NLFQTF 258Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.155 0.468 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 395,708 Number of extensions: 682 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |