Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001257436 22 134 NP_001257437 22 134 NP_006281 22 134 XP_006715618 22 134 XP_005267176 22 134 NP_036250 17 3301 NP_064621 17 3301 XP_005257785 16 5631 XP_005250515 16 5631 XP_005250514 16 5631 NP_002088 16 5631 NP_061877 16 5631 NP_001269952 16 7355 NP_059830 16 7355 XP_006714051 16 7355 NP_005103 16 7355 NP_000279 15 9605 NP_005384 15 9605 NP_061146 15 9605 NP_002883 15 9605 NP_075377 15 9605 NP_075376 15 9605 NP_001156729 15 9605 NP_954872 15 9605 XP_005268022 15 9605 XP_005268021 15 9605 XP_005267076 15 9605>NP_001257436 Length = 790 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NKHFASASG 9 NKHFA+ASG Sbjct: 634 NKHFAAASG 642>NP_001257437 Length = 790 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NKHFASASG 9 NKHFA+ASG Sbjct: 634 NKHFAAASG 642>NP_006281 Length = 790 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NKHFASASG 9 NKHFA+ASG Sbjct: 634 NKHFAAASG 642>XP_006715618 Length = 577 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NKHFASASG 9 NKHFA+ASG Sbjct: 421 NKHFAAASG 429>XP_005267176 Length = 790 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NKHFASASG 9 NKHFA+ASG Sbjct: 634 NKHFAAASG 642>NP_036250 Length = 431 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KHFASAS 8 KHFAS+S Sbjct: 335 KHFASSS 341>NP_064621 Length = 325 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NKHFASAS 8 N+HFA+A+ Sbjct: 40 NRHFAAAT 47>XP_005257785 Length = 1887 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KHFASASG 9 +HF+ ASG Sbjct: 132 QHFSQASG 139>XP_005250515 Length = 1083 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HFASASG 9 H+A+ASG Sbjct: 150 HYAAASG 156>XP_005250514 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HFASASG 9 H+A+ASG Sbjct: 150 HYAAASG 156>NP_002088 Length = 365 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KHFASAS 8 KHFAS S Sbjct: 171 KHFASPS 177>NP_061877 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HFASASG 9 H+A+ASG Sbjct: 150 HYAAASG 156>NP_001269952 Length = 320 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KHFASASG 9 KH A++SG Sbjct: 69 KHLAASSG 76>NP_059830 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NKHFAS 6 N+HFAS Sbjct: 544 NEHFAS 549>XP_006714051 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NKHFAS 6 N+HFAS Sbjct: 418 NEHFAS 423>NP_005103 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NKHFAS 6 N+HFAS Sbjct: 404 NEHFAS 409>NP_000279 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FASASG 9 FASASG Sbjct: 171 FASASG 176>NP_005384 Length = 1909 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FASASG 9 FASASG Sbjct: 1133 FASASG 1138>NP_061146 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KHFASASG 9 +HF ASG Sbjct: 710 EHFQEASG 717>NP_002883 Length = 1257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NKHFASAS 8 NK+F+SA+ Sbjct: 835 NKNFSSAT 842>NP_075377 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NKHFASAS 8 NK+F+SA+ Sbjct: 835 NKNFSSAT 842>NP_075376 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NKHFASAS 8 NK+F+SA+ Sbjct: 835 NKNFSSAT 842>NP_001156729 Length = 1932 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FASASG 9 FASASG Sbjct: 1156 FASASG 1161>NP_954872 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KHFASASG 9 +HF ASG Sbjct: 657 EHFQEASG 664>XP_005268022 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NKHFASAS 8 NK+F+SA+ Sbjct: 855 NKNFSSAT 862>XP_005268021 Length = 1277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NKHFASAS 8 NK+F+SA+ Sbjct: 855 NKNFSSAT 862>XP_005267076 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FASASG 9 FASASG Sbjct: 133 FASASG 138Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.114 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 513,421 Number of extensions: 679 Number of successful extensions: 27 Number of sequences better than 10000.0: 27 Number of HSP's gapped: 27 Number of HSP's successfully gapped: 27 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |