Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1482 NP_671714 18 1482 XP_006715890 18 1482 XP_005250160 18 1482 XP_005250159 18 1482 NP_001039 17 2528 NP_443139 17 4312 NP_001254656 17 4312 NP_001139187 17 4312 NP_490595 17 4312 NP_055775 17 4312 XP_006721843 17 4312 XP_006721841 17 4312 XP_006721840 17 4312 XP_005257227 17 4312 XP_006721839 17 4312 XP_006719283 17 4312 XP_006719282 17 4312 XP_006716050 17 4312 XP_005263887 17 4312 NP_001232 17 4312 NP_075556 16 5631 XP_006723676 16 5631 XP_006723675 16 5631 XP_006723674 16 5631 XP_006723673 16 5631 NP_001892 16 7355 NP_060391 16 7355 NP_054799 16 7355 NP_005217 16 7355 XP_005254478 16 7355 NP_002448 15 9605 NP_001181926 15 9605 NP_001014437 15 9605 NP_919226 15 9605 NP_001136105 15 9605 NP_001245330 15 9605 NP_001035049 15 9605 NP_055123 15 9605 NP_258416 15 9605 NP_203134 15 9605 NP_203133 15 9605 NP_150284 15 9605 NP_005705 15 9605 NP_064710 15 9605 NP_001192200 15 9605 XP_006725192 15 9605 XP_006723736 15 9605 XP_005256637 15 9605 XP_005256636 15 9605 XP_005255493 15 9605 XP_006721128 15 9605 XP_005255492 15 9605 XP_006718403 15 9605 XP_006716315 15 9605>NP_005742 Length = 3907 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NISCRLQAA 9 NIS RLQAA Sbjct: 1845 NISSRLQAA 1853>NP_671714 Length = 3899 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NISCRLQAA 9 NIS RLQAA Sbjct: 1845 NISSRLQAA 1853>XP_006715890 Length = 3860 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NISCRLQAA 9 NIS RLQAA Sbjct: 1798 NISSRLQAA 1806>XP_005250160 Length = 3939 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NISCRLQAA 9 NIS RLQAA Sbjct: 1877 NISSRLQAA 1885>XP_005250159 Length = 3952 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NISCRLQAA 9 NIS RLQAA Sbjct: 1877 NISSRLQAA 1885>NP_001039 Length = 116 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISCRLQAA 9 +SCRLQ A Sbjct: 2 LSCRLQCA 9>NP_443139 Length = 1078 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SCRLQAA 9 SCRLQ A Sbjct: 173 SCRLQGA 179>NP_001254656 Length = 525 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISCRLQAA 9 I+CR QAA Sbjct: 518 IACRCQAA 525>NP_001139187 Length = 516 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ISCRLQAA 9 ISC LQAA Sbjct: 434 ISCILQAA 441>NP_490595 Length = 730 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISCRLQAA 9 +SCR QAA Sbjct: 34 LSCRQQAA 41>NP_055775 Length = 525 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISCRLQAA 9 I+CR QAA Sbjct: 518 IACRCQAA 525>XP_006721843 Length = 276 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISCRLQAA 9 I+CR QAA Sbjct: 269 IACRCQAA 276>XP_006721841 Length = 524 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISCRLQAA 9 I+CR QAA Sbjct: 517 IACRCQAA 524>XP_006721840 Length = 525 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISCRLQAA 9 I+CR QAA Sbjct: 518 IACRCQAA 525>XP_005257227 Length = 525 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISCRLQAA 9 I+CR QAA Sbjct: 518 IACRCQAA 525>XP_006721839 Length = 525 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISCRLQAA 9 I+CR QAA Sbjct: 518 IACRCQAA 525>XP_006719283 Length = 968 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SCRLQAA 9 SCRLQ A Sbjct: 63 SCRLQGA 69>XP_006719282 Length = 968 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SCRLQAA 9 SCRLQ A Sbjct: 63 SCRLQGA 69>XP_006716050 Length = 516 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ISCRLQAA 9 ISC LQAA Sbjct: 434 ISCILQAA 441>XP_005263887 Length = 709 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISCRLQAA 9 +SCR QAA Sbjct: 34 LSCRQQAA 41>NP_001232 Length = 663 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISCRLQAA 9 +SCR QAA Sbjct: 34 LSCRQQAA 41>NP_075556 Length = 1709 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NISCRL 6 N+SCRL Sbjct: 1462 NLSCRL 1467>XP_006723676 Length = 1385 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NISCRL 6 N+SCRL Sbjct: 1138 NLSCRL 1143>XP_006723675 Length = 1623 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NISCRL 6 N+SCRL Sbjct: 1376 NLSCRL 1381>XP_006723674 Length = 1701 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NISCRL 6 N+SCRL Sbjct: 1462 NLSCRL 1467>XP_006723673 Length = 1709 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NISCRL 6 N+SCRL Sbjct: 1462 NLSCRL 1467>NP_001892 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NISCRLQ 7 N SCRL+ Sbjct: 225 NASCRLE 231>NP_060391 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NISCRLQA 8 NISC++++ Sbjct: 185 NISCKIKS 192>NP_054799 Length = 1548 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NISCRL 6 NISCR+ Sbjct: 959 NISCRV 964>NP_005217 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NISCRLQA 8 +++CR+QA Sbjct: 266 DVACRVQA 273>XP_005254478 Length = 1548 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NISCRL 6 NISCR+ Sbjct: 959 NISCRV 964>NP_002448 Length = 5179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 NISCR 5 NISCR Sbjct: 1820 NISCR 1824>NP_001181926 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CRLQAA 9 CRLQA+ Sbjct: 87 CRLQAS 92>NP_001014437 Length = 831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CRLQAA 9 CRLQA+ Sbjct: 87 CRLQAS 92>NP_919226 Length = 1209 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NISCRLQ 7 NISC+++ Sbjct: 550 NISCKIR 556>NP_001136105 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ISCRLQA 8 + CRLQA Sbjct: 214 LHCRLQA 220>NP_001245330 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 NISCR 5 NISCR Sbjct: 1001 NISCR 1005>NP_001035049 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 NISCR 5 NISCR Sbjct: 1054 NISCR 1058>NP_055123 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ISCRLQA 8 + CRLQA Sbjct: 214 LHCRLQA 220>NP_258416 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SCRLQA 8 +CRLQA Sbjct: 36 ACRLQA 41>NP_203134 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SCRLQA 8 +CRLQA Sbjct: 36 ACRLQA 41>NP_203133 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SCRLQA 8 +CRLQA Sbjct: 36 ACRLQA 41>NP_150284 Length = 79 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NISCRLQ 7 + SCRLQ Sbjct: 25 SFSCRLQ 31>NP_005705 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SCRLQA 8 +CRLQA Sbjct: 36 ACRLQA 41>NP_064710 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SCRLQA 8 SCRL+A Sbjct: 108 SCRLEA 113>NP_001192200 Length = 174 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 NISCRL 6 N+SCR+ Sbjct: 38 NVSCRV 43>XP_006725192 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CRLQAA 9 CRLQA+ Sbjct: 87 CRLQAS 92>XP_006723736 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CRLQAA 9 CRLQA+ Sbjct: 189 CRLQAS 194>XP_005256637 Length = 879 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ISCRLQA 8 + CRLQA Sbjct: 214 LHCRLQA 220>XP_005256636 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ISCRLQA 8 + CRLQA Sbjct: 214 LHCRLQA 220>XP_005255493 Length = 959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SCRLQA 8 SCRL+A Sbjct: 108 SCRLEA 113>XP_006721128 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SCRLQA 8 SCRL+A Sbjct: 108 SCRLEA 113>XP_005255492 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SCRLQA 8 SCRL+A Sbjct: 108 SCRLEA 113>XP_006718403 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CRLQAA 9 CRLQA+ Sbjct: 87 CRLQAS 92>XP_006716315 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 NISCR 5 NISCR Sbjct: 348 NISCR 352Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.126 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 618,610 Number of extensions: 603 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |