Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245202 20 509 NP_001245200 20 509 NP_001161091 20 509 NP_000240 20 509 NP_001161090 20 509 NP_001161089 20 509 NP_001245203 20 509 XP_005265223 20 509 XP_005265221 20 509 XP_005265220 20 509 XP_005265218 20 509 NP_115896 17 3301 NP_001171672 17 3301 XP_006715291 17 3301 NP_006148 17 4312 NP_963845 17 4312 NP_001275643 17 4312 NP_001275642 17 4312 NP_149160 16 5631 NP_149159 16 5631 NP_068707 16 5631 NP_001243233 16 5631 NP_001243232 16 5631 NP_899205 16 5631 NP_899204 16 5631 XP_005264243 16 5631 XP_006712025 16 5631 XP_006712024 16 5631 XP_005264241 16 5631 XP_005264240 16 5631 XP_005264239 16 5631 XP_006712023 16 5631 NP_071331 16 7355 NP_937983 16 7355 NP_001180305 16 7355 NP_001038188 16 7355 NP_004375 16 7355 NP_001257501 16 7355 NP_001277141 16 7355 NP_114151 16 7355 NP_001026982 16 7355 NP_001310 16 7355 XP_005259557 16 7355 XP_005259556 16 7355 XP_005259555 16 7355 XP_005271953 16 7355 XP_005271952 16 7355 XP_005271951 16 7355 XP_005271950 16 7355 XP_005271949 16 7355 XP_005271948 16 7355 NP_872387 15 9605 NP_001138762 15 9605 NP_001265432 15 9605 NP_938018 15 9605 NP_689926 15 9605 NP_001094092 15 9605 NP_060411 15 9605 NP_003804 15 9605 NP_003610 15 9605 XP_005257544 15 9605 XP_005263375 15 9605 XP_005245160 15 9605>NP_001245202 Length = 515 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NFGVLRLS 8 NFGVLRLS Sbjct: 329 NFGVLRLS 336>NP_001245200 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NFGVLRLS 8 NFGVLRLS Sbjct: 570 NFGVLRLS 577>NP_001161091 Length = 515 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NFGVLRLS 8 NFGVLRLS Sbjct: 329 NFGVLRLS 336>NP_000240 Length = 756 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NFGVLRLS 8 NFGVLRLS Sbjct: 570 NFGVLRLS 577>NP_001161090 Length = 515 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NFGVLRLS 8 NFGVLRLS Sbjct: 329 NFGVLRLS 336>NP_001161089 Length = 658 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NFGVLRLS 8 NFGVLRLS Sbjct: 472 NFGVLRLS 479>NP_001245203 Length = 515 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NFGVLRLS 8 NFGVLRLS Sbjct: 329 NFGVLRLS 336>XP_005265223 Length = 415 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NFGVLRLS 8 NFGVLRLS Sbjct: 229 NFGVLRLS 236>XP_005265221 Length = 515 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NFGVLRLS 8 NFGVLRLS Sbjct: 329 NFGVLRLS 336>XP_005265220 Length = 515 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NFGVLRLS 8 NFGVLRLS Sbjct: 329 NFGVLRLS 336>XP_005265218 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NFGVLRLS 8 NFGVLRLS Sbjct: 501 NFGVLRLS 508>NP_115896 Length = 809 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 FGVLRLSG 9 FGVL LSG Sbjct: 461 FGVLLLSG 468>NP_001171672 Length = 809 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 FGVLRLSG 9 FGVL LSG Sbjct: 461 FGVLLLSG 468>XP_006715291 Length = 558 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 FGVLRLSG 9 FGVL LSG Sbjct: 210 FGVLLLSG 217>NP_006148 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NFGVLRLSG 9 ++GV RLSG Sbjct: 770 SYGVSRLSG 778>NP_963845 Length = 763 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NFGVLRLSG 9 ++GV RLSG Sbjct: 723 SYGVSRLSG 731>NP_001275643 Length = 753 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NFGVLRLSG 9 ++GV RLSG Sbjct: 713 SYGVSRLSG 721>NP_001275642 Length = 838 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NFGVLRLSG 9 ++GV RLSG Sbjct: 798 SYGVSRLSG 806>NP_149160 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>NP_149159 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>NP_068707 Length = 627 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>NP_001243233 Length = 602 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>NP_001243232 Length = 620 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>NP_899205 Length = 560 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>NP_899204 Length = 609 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>XP_005264243 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>XP_006712025 Length = 526 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>XP_006712024 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>XP_005264241 Length = 590 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>XP_005264240 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>XP_005264239 Length = 602 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>XP_006712023 Length = 624 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFGVLRLS 8 NF V+RLS Sbjct: 26 NFDVIRLS 33>NP_071331 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 54 NFGELRL 60>NP_937983 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FGVLRL 7 FGVLRL Sbjct: 975 FGVLRL 980>NP_001180305 Length = 1069 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FGVLRL 7 FGVLRL Sbjct: 912 FGVLRL 917>NP_001038188 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 53 NFGELRL 59>NP_004375 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 53 NFGELRL 59>NP_001257501 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 53 NFGELRL 59>NP_001277141 Length = 393 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FGVLRL 7 FGVLRL Sbjct: 298 FGVLRL 303>NP_114151 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FGVLRL 7 FGVLRL Sbjct: 260 FGVLRL 265>NP_001026982 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 53 NFGELRL 59>NP_001310 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 56 NFGELRL 62>XP_005259557 Length = 440 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 56 NFGELRL 62>XP_005259556 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 56 NFGELRL 62>XP_005259555 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 56 NFGELRL 62>XP_005271953 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 53 NFGELRL 59>XP_005271952 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 53 NFGELRL 59>XP_005271951 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 53 NFGELRL 59>XP_005271950 Length = 448 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 53 NFGELRL 59>XP_005271949 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 53 NFGELRL 59>XP_005271948 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFGVLRL 7 NFG LRL Sbjct: 53 NFGELRL 59>NP_872387 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NFGVLRLSG 9 NF +L +SG Sbjct: 3 NFSLLSISG 11>NP_001138762 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FGVLRLSG 9 FG LR+ G Sbjct: 289 FGALRIPG 296>NP_001265432 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGVLRLS 8 FG LRLS Sbjct: 4 FGFLRLS 10>NP_938018 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FGVLRLSG 9 FG LR+ G Sbjct: 289 FGALRIPG 296>NP_689926 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGVLRLS 8 FG LRLS Sbjct: 4 FGFLRLS 10>NP_001094092 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NFGVLRLSG 9 NF ++RL G Sbjct: 528 NFSLMRLLG 536>NP_060411 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NFGVLRLSG 9 NF ++RL G Sbjct: 528 NFSLMRLLG 536>NP_003804 Length = 722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GVLRLSG 9 GVL++SG Sbjct: 134 GVLKISG 140>NP_003610 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GVLRLSG 9 GV+RL+G Sbjct: 385 GVIRLAG 391>XP_005257544 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NFGVLRLSG 9 NF ++RL G Sbjct: 528 NFSLMRLLG 536>XP_005263375 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GVLRLSG 9 GV+RL+G Sbjct: 385 GVIRLAG 391>XP_005245160 Length = 223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NFGVLRLSG 9 NF +L +SG Sbjct: 3 NFSLLSISG 11Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.153 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 444,370 Number of extensions: 741 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |