Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_005350                                                              22     134
NP_699177                                                              19     869
NP_055317                                                              18    1935
NP_005718                                                              17    3301
NP_001138944                                                           17    3301
NP_001138945                                                           17    3301
NP_653213                                                              17    3301
XP_006722454                                                           17    3301
XP_006722453                                                           17    3301
XP_006722452                                                           17    3301
XP_006722451                                                           17    3301
XP_006722450                                                           17    3301
XP_006722449                                                           17    3301
XP_006722448                                                           17    3301
XP_006722447                                                           17    3301
NP_001166600                                                           17    3301
NP_001120916                                                           16    5631
NP_001001547                                                           16    5631
NP_000063                                                              16    5631
NP_001001548                                                           16    5631
NP_001120915                                                           16    5631
NP_065853                                                              16    5631
NP_001276838                                                           16    5631
NP_001276840                                                           16    5631
NP_904358                                                              16    5631
NP_001230728                                                           16    5631
NP_055327                                                              16    5631
XP_006725856                                                           16    5631
XP_006725729                                                           16    5631
XP_006725727                                                           16    5631
XP_006725722                                                           16    5631
XP_006725721                                                           16    5631
XP_006725503                                                           16    5631
XP_006725496                                                           16    5631
XP_006725495                                                           16    5631
XP_006725486                                                           16    5631
XP_006725484                                                           16    5631
XP_006725706                                                           16    5631
XP_005266640                                                           16    5631
XP_005266639                                                           16    5631
XP_006719950                                                           16    5631
XP_005271684                                                           16    5631
XP_005271472                                                           16    5631
XP_005271471                                                           16    5631
XP_005271470                                                           16    5631
XP_005271469                                                           16    5631
XP_005250772                                                           16    5631
XP_005250771                                                           16    5631
XP_005250770                                                           16    5631
NP_703144                                                              16    5631
NP_689800                                                              16    5631
NP_001017969                                                           16    7355
NP_005378                                                              16    7355
XP_006723005                                                           16    7355
XP_006718305                                                           16    7355
XP_005253007                                                           16    7355
XP_006716793                                                           16    7355
XP_005251442                                                           16    7355
NP_005288                                                              15    9605
NP_003830                                                              15    9605
NP_001265197                                                           15    9605
NP_001275658                                                           15    9605
NP_004854                                                              15    9605
NP_001275660                                                           15    9605
NP_004929                                                              15    9605
NP_001275659                                                           15    9605
NP_005294                                                              15    9605
XP_005266834                                                           15    9605
XP_005251814                                                           15    9605
XP_006717051                                                           15    9605
XP_005263769                                                           15    9605
XP_005263768                                                           15    9605
NP_060797                                                              15    9605
>NP_005350
          Length = 552

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   NATNTANFP 9
           NAT+TANFP
Sbjct: 207 NATSTANFP 215
>NP_699177
          Length = 799

 Score = 18.9 bits (37), Expect =   869
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   NATNTANFP 9
           N+T TAN+P
Sbjct: 314 NSTETANYP 322
>NP_055317
          Length = 504

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TNTANFP 9
           TN ANFP
Sbjct: 383 TNVANFP 389
>NP_005718
          Length = 241

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   NATNTAN 7
           N TNTAN
Sbjct: 178 NVTNTAN 184
>NP_001138944
          Length = 1114

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+T NFP
Sbjct: 822 NNTDTFNFP 830
>NP_001138945
          Length = 512

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+T NFP
Sbjct: 172 NNTDTFNFP 180
>NP_653213
          Length = 2211

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    NATNTANFP 9
            N T+T NFP
Sbjct: 1871 NNTDTFNFP 1879
>XP_006722454
          Length = 1144

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+T NFP
Sbjct: 804 NNTDTFNFP 812
>XP_006722453
          Length = 1162

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+T NFP
Sbjct: 822 NNTDTFNFP 830
>XP_006722452
          Length = 1162

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+T NFP
Sbjct: 822 NNTDTFNFP 830
>XP_006722451
          Length = 1206

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+T NFP
Sbjct: 866 NNTDTFNFP 874
>XP_006722450
          Length = 1249

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+T NFP
Sbjct: 964 NNTDTFNFP 972
>XP_006722449
          Length = 1256

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+T NFP
Sbjct: 964 NNTDTFNFP 972
>XP_006722448
          Length = 1304

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+T NFP
Sbjct: 964 NNTDTFNFP 972
>XP_006722447
          Length = 1933

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    NATNTANFP 9
            N T+T NFP
Sbjct: 1593 NNTDTFNFP 1601
>NP_001166600
          Length = 457

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+T NFP
Sbjct: 172 NNTDTFNFP 180
>NP_001120916
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+ A+FP
Sbjct: 247 NGTDAASFP 255
>NP_001001547
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+ A+FP
Sbjct: 247 NGTDAASFP 255
>NP_000063
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+ A+FP
Sbjct: 247 NGTDAASFP 255
>NP_001001548
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+ A+FP
Sbjct: 247 NGTDAASFP 255
>NP_001120915
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+ A+FP
Sbjct: 247 NGTDAASFP 255
>NP_065853
          Length = 1117

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   ATNTAN 7
           ATNTAN
Sbjct: 360 ATNTAN 365
>NP_001276838
          Length = 412

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+ A+FP
Sbjct: 187 NGTDAASFP 195
>NP_001276840
          Length = 396

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+ A+FP
Sbjct: 171 NGTDAASFP 179
>NP_904358
          Length = 1073

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  NATNTANFP 9
          NAT++ +FP
Sbjct: 51 NATSSEDFP 59
>NP_001230728
          Length = 570

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  NATNTANFP 9
          NAT++ +FP
Sbjct: 51 NATSSEDFP 59
>NP_055327
          Length = 304

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N T  ANFP
Sbjct: 178 NGTFQANFP 186
>XP_006725856
          Length = 304

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N T  ANFP
Sbjct: 178 NGTFQANFP 186
>XP_006725729
          Length = 304

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N T  ANFP
Sbjct: 178 NGTFQANFP 186
>XP_006725727
          Length = 304

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N T  ANFP
Sbjct: 178 NGTFQANFP 186
>XP_006725722
          Length = 287

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N T  ANFP
Sbjct: 178 NGTFQANFP 186
>XP_006725721
          Length = 304

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N T  ANFP
Sbjct: 178 NGTFQANFP 186
>XP_006725503
          Length = 304

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N T  ANFP
Sbjct: 178 NGTFQANFP 186
>XP_006725496
          Length = 287

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N T  ANFP
Sbjct: 178 NGTFQANFP 186
>XP_006725495
          Length = 304

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N T  ANFP
Sbjct: 178 NGTFQANFP 186
>XP_006725486
          Length = 304

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N T  ANFP
Sbjct: 178 NGTFQANFP 186
>XP_006725484
          Length = 304

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N T  ANFP
Sbjct: 178 NGTFQANFP 186
>XP_006725706
          Length = 304

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N T  ANFP
Sbjct: 178 NGTFQANFP 186
>XP_005266640
          Length = 1028

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  NATNTANFP 9
          NAT++ +FP
Sbjct: 51 NATSSEDFP 59
>XP_005266639
          Length = 1048

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  NATNTANFP 9
          NAT++ +FP
Sbjct: 51 NATSSEDFP 59
>XP_006719950
          Length = 1073

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  NATNTANFP 9
          NAT++ +FP
Sbjct: 51 NATSSEDFP 59
>XP_005271684
          Length = 1081

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   ATNTAN 7
           ATNTAN
Sbjct: 360 ATNTAN 365
>XP_005271472
          Length = 273

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   NATNTANF 8
           N TNT NF
Sbjct: 235 NWTNTLNF 242
>XP_005271471
          Length = 273

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   NATNTANF 8
           N TNT NF
Sbjct: 235 NWTNTLNF 242
>XP_005271470
          Length = 282

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   NATNTANF 8
           N TNT NF
Sbjct: 204 NWTNTLNF 211
>XP_005271469
          Length = 295

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   NATNTANF 8
           N TNT NF
Sbjct: 217 NWTNTLNF 224
>XP_005250772
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+ A+FP
Sbjct: 247 NGTDAASFP 255
>XP_005250771
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+ A+FP
Sbjct: 247 NGTDAASFP 255
>XP_005250770
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   NATNTANFP 9
           N T+ A+FP
Sbjct: 247 NGTDAASFP 255
>NP_703144
          Length = 410

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N T  ANFP
Sbjct: 273 NGTFQANFP 281
>NP_689800
          Length = 313

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   NATNTANF 8
           N TNT NF
Sbjct: 235 NWTNTLNF 242
>NP_001017969
          Length = 2103

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    TNTANF 8
            TNT+NF
Sbjct: 1821 TNTSNF 1826
>NP_005378
          Length = 937

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TNTANF 8
           TNT+NF
Sbjct: 403 TNTSNF 408
>XP_006723005
          Length = 292

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   NATNTANFP 9
           N+TN  N P
Sbjct: 215 NSTNVKNVP 223
>XP_006718305
          Length = 1743

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TNTANF 8
           TNT+NF
Sbjct: 403 TNTSNF 408
>XP_005253007
          Length = 1817

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TNTANF 8
           TNT+NF
Sbjct: 403 TNTSNF 408
>XP_006716793
          Length = 1317

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    TNTANF 8
            TNT+NF
Sbjct: 1035 TNTSNF 1040
>XP_005251442
          Length = 2073

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    TNTANF 8
            TNT+NF
Sbjct: 1791 TNTSNF 1796
>NP_005288
          Length = 422

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  NATNTANFP 9
          NA+NT++ P
Sbjct: 82 NASNTSDGP 90
>NP_003830
          Length = 616

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   ATNTANF 8
           +T+TANF
Sbjct: 270 STHTANF 276
>NP_001265197
          Length = 602

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   ATNTANF 8
           +T+TANF
Sbjct: 256 STHTANF 262
>NP_001275658
          Length = 1430

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   NATNTANFP 9
           ++TN++ FP
Sbjct: 724 SSTNSSRFP 732
>NP_004854
          Length = 562

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   ATNTANFP 9
           ATN+ N P
Sbjct: 240 ATNSMNIP 247
>NP_001275660
          Length = 1430

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   NATNTANFP 9
           ++TN++ FP
Sbjct: 724 SSTNSSRFP 732
>NP_004929
          Length = 1430

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   NATNTANFP 9
           ++TN++ FP
Sbjct: 724 SSTNSSRFP 732
>NP_001275659
          Length = 1430

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   NATNTANFP 9
           ++TN++ FP
Sbjct: 724 SSTNSSRFP 732
>NP_005294
          Length = 300

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   NATNTANF 8
           NA+N A+F
Sbjct: 241 NASNVASF 248
>XP_005266834
          Length = 523

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   ATNTANF 8
           +T+TANF
Sbjct: 270 STHTANF 276
>XP_005251814
          Length = 839

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   NATNTANFP 9
           ++TN++ FP
Sbjct: 724 SSTNSSRFP 732
>XP_006717051
          Length = 1285

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   NATNTANFP 9
           ++TN++ FP
Sbjct: 579 SSTNSSRFP 587
>XP_005263769
          Length = 1727

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    ATNTANFP 9
            + NTAN P
Sbjct: 1098 SANTANHP 1105
>XP_005263768
          Length = 1727

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    ATNTANFP 9
            + NTAN P
Sbjct: 1098 SANTANHP 1105
>NP_060797
          Length = 552

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   ATNTANFP 9
           ATN+ N P
Sbjct: 232 ATNSMNIP 239
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.304    0.113    0.335 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 461,013
Number of extensions: 918
Number of successful extensions: 73
Number of sequences better than 10000.0: 73
Number of HSP's gapped: 73
Number of HSP's successfully gapped: 73
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.4 bits)
S2: 28 (15.4 bits)

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