Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 18 1935 NP_055903 18 1935 NP_665698 17 3301 NP_001098983 17 3301 XP_006713075 17 3301 XP_005264984 17 3301 XP_005264982 17 3301 XP_005264980 17 3301 XP_006713074 17 3301 XP_005264979 17 3301 XP_005264978 17 3301 NP_000366 16 5631 NP_689737 16 5631 NP_001153518 16 5631 NP_001153505 16 5631 XP_005270198 16 5631 XP_005270197 16 5631 XP_005270196 16 5631 XP_005270195 16 5631 XP_006718023 16 5631 XP_005270194 16 5631 XP_005246402 16 5631 XP_006712393 16 5631 XP_005246401 16 5631>NP_001155973 Length = 1833 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NASLASKVG 9 NASLASK G Sbjct: 788 NASLASKGG 796>NP_055903 Length = 1723 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NASLASKVG 9 NASLASK G Sbjct: 788 NASLASKGG 796>NP_665698 Length = 1320 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NASLASKVG 9 +ASLAS++G Sbjct: 761 DASLASRIG 769>NP_001098983 Length = 1272 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NASLASKVG 9 +ASLAS++G Sbjct: 713 DASLASRIG 721>XP_006713075 Length = 1019 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NASLASKVG 9 +ASLAS++G Sbjct: 754 DASLASRIG 762>XP_005264984 Length = 1140 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NASLASKVG 9 +ASLAS++G Sbjct: 567 DASLASRIG 575>XP_005264982 Length = 1286 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NASLASKVG 9 +ASLAS++G Sbjct: 713 DASLASRIG 721>XP_005264980 Length = 1313 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NASLASKVG 9 +ASLAS++G Sbjct: 754 DASLASRIG 762>XP_006713074 Length = 1318 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NASLASKVG 9 +ASLAS++G Sbjct: 754 DASLASRIG 762>XP_005264979 Length = 1322 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NASLASKVG 9 +ASLAS++G Sbjct: 754 DASLASRIG 762>XP_005264978 Length = 1327 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NASLASKVG 9 +ASLAS++G Sbjct: 754 DASLASRIG 762>NP_000366 Length = 265 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASLASKVG 9 ASL SK+G Sbjct: 104 ASLVSKIG 111>NP_689737 Length = 1265 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NASLASKV 8 N SLASK+ Sbjct: 32 NVSLASKI 39>NP_001153518 Length = 1261 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NASLASKV 8 N SLASK+ Sbjct: 32 NVSLASKI 39>NP_001153505 Length = 1260 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NASLASKV 8 N SLASK+ Sbjct: 32 NVSLASKI 39>XP_005270198 Length = 139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASLASKVG 9 ASL SK+G Sbjct: 104 ASLVSKIG 111>XP_005270197 Length = 223 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASLASKVG 9 ASL SK+G Sbjct: 104 ASLVSKIG 111>XP_005270196 Length = 262 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASLASKVG 9 ASL SK+G Sbjct: 104 ASLVSKIG 111>XP_005270195 Length = 265 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASLASKVG 9 ASL SK+G Sbjct: 104 ASLVSKIG 111>XP_006718023 Length = 292 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASLASKVG 9 ASL SK+G Sbjct: 104 ASLVSKIG 111>XP_005270194 Length = 292 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASLASKVG 9 ASL SK+G Sbjct: 104 ASLVSKIG 111>XP_005246402 Length = 1265 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NASLASKV 8 N SLASK+ Sbjct: 32 NVSLASKI 39>XP_006712393 Length = 1267 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NASLASKV 8 N SLASK+ Sbjct: 38 NVSLASKI 45>XP_005246401 Length = 1271 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NASLASKV 8 N SLASK+ Sbjct: 38 NVSLASKI 45Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.110 0.259 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 227,795 Number of extensions: 314 Number of successful extensions: 24 Number of sequences better than 10000.0: 24 Number of HSP's gapped: 24 Number of HSP's successfully gapped: 24 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |