Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 20 509 NP_005550 16 5631 NP_001420 16 7355 XP_006724228 16 7355 NP_037498 15 9605 NP_061841 15 9605 NP_444271 15 9605 NP_005422 15 9605 XP_005249592 15 9605 XP_005249591 15 9605 XP_005249590 15 9605 XP_005249589 15 9605 XP_005249588 15 9605 XP_006711953 15 9605 XP_006711951 15 9605>NP_443179 Length = 2170 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NANLREST 8 NANLREST Sbjct: 550 NANLREST 557>NP_005550 Length = 3075 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NANLRE 6 NANLRE Sbjct: 1786 NANLRE 1791>NP_001420 Length = 2414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NANLRESTI 9 N+NL +ST+ Sbjct: 2403 NSNLSQSTL 2411>XP_006724228 Length = 2388 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NANLRESTI 9 N+NL +ST+ Sbjct: 2377 NSNLSQSTL 2385>NP_037498 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NANLRE 6 NAN+RE Sbjct: 571 NANIRE 576>NP_061841 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NANLRESTI 9 +AN+RE T+ Sbjct: 273 SANIRELTL 281>NP_444271 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NANLRESTI 9 N+NLRE I Sbjct: 705 NSNLRELPI 713>NP_005422 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NANLRESTI 9 + NL+EST+ Sbjct: 165 SVNLQESTL 173>XP_005249592 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NANLRESTI 9 N+NLRE I Sbjct: 705 NSNLRELPI 713>XP_005249591 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NANLRESTI 9 N+NLRE I Sbjct: 715 NSNLRELPI 723>XP_005249590 Length = 1211 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NANLRESTI 9 N+NLRE I Sbjct: 745 NSNLRELPI 753>XP_005249589 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NANLRESTI 9 N+NLRE I Sbjct: 755 NSNLRELPI 763>XP_005249588 Length = 1221 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NANLRESTI 9 N+NLRE I Sbjct: 755 NSNLRELPI 763>XP_006711953 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NANLRESTI 9 +AN+RE T+ Sbjct: 48 SANIRELTL 56>XP_006711951 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NANLRESTI 9 +AN+RE T+ Sbjct: 214 SANIRELTL 222Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.116 0.280 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 441,619 Number of extensions: 754 Number of successful extensions: 15 Number of sequences better than 10000.0: 15 Number of HSP's gapped: 15 Number of HSP's successfully gapped: 15 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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