Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 299 NP_671714 20 299 XP_006715890 20 299 XP_005250160 20 299 XP_005250159 20 299 NP_001171922 18 1935 XP_006719916 18 1935 XP_006719915 18 1935 XP_006719914 18 1935 XP_005266530 18 1935 XP_006719913 18 1935 XP_006719912 18 1935 XP_006719911 18 1935 XP_006719910 18 1935 XP_006719909 18 1935 NP_112567 18 1935 NP_001230175 17 4312 NP_071751 17 4312 NP_001139761 17 4312 NP_001274324 17 4312 XP_006712547 17 4312 NP_003099 16 5631 NP_653250 16 5631 XP_006716571 16 5631 XP_006716570 16 5631 XP_005250852 16 5631 XP_005250851 16 5631 NP_689755 16 7355 NP_001123361 16 7355 NP_001913 16 7355 XP_006714215 16 7355 XP_006714214 16 7355 XP_005262915 16 7355 XP_006714174 16 7355 NP_055806 16 7355 NP_055731 15 9605 NP_001128625 15 9605 NP_036553 15 9605 NP_001036037 15 9605 NP_001262 15 9605 XP_005273523 15 9605 XP_006716387 15 9605 XP_005273522 15 9605 XP_005273521 15 9605 XP_005273520 15 9605 XP_006716386 15 9605 NP_001121903 15 9605 NP_001128626 15 9605 NP_056174 15 9605>NP_005742 Length = 3907 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 NAHSLSE+A Sbjct: 2373 NAHSLSEEA 2381>NP_671714 Length = 3899 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 NAHSLSE+A Sbjct: 2365 NAHSLSEEA 2373>XP_006715890 Length = 3860 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 NAHSLSE+A Sbjct: 2326 NAHSLSEEA 2334>XP_005250160 Length = 3939 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 NAHSLSE+A Sbjct: 2405 NAHSLSEEA 2413>XP_005250159 Length = 3952 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 NAHSLSE+A Sbjct: 2418 NAHSLSEEA 2426>NP_001171922 Length = 1619 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 N+HSLSE++ Sbjct: 1109 NSHSLSEKS 1117>XP_006719916 Length = 1482 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 N+HSLSE++ Sbjct: 972 NSHSLSEKS 980>XP_006719915 Length = 1531 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 N+HSLSE++ Sbjct: 1021 NSHSLSEKS 1029>XP_006719914 Length = 1639 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 N+HSLSE++ Sbjct: 1129 NSHSLSEKS 1137>XP_005266530 Length = 1643 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 N+HSLSE++ Sbjct: 1133 NSHSLSEKS 1141>XP_006719913 Length = 1650 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 N+HSLSE++ Sbjct: 1182 NSHSLSEKS 1190>XP_006719912 Length = 1672 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 N+HSLSE++ Sbjct: 1162 NSHSLSEKS 1170>XP_006719911 Length = 1688 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 N+HSLSE++ Sbjct: 1178 NSHSLSEKS 1186>XP_006719910 Length = 1692 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 N+HSLSE++ Sbjct: 1182 NSHSLSEKS 1190>XP_006719909 Length = 1692 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 N+HSLSE++ Sbjct: 1182 NSHSLSEKS 1190>NP_112567 Length = 1623 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NAHSLSEQA 9 N+HSLSE++ Sbjct: 1113 NSHSLSEKS 1121>NP_001230175 Length = 804 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AHSLSEQ 8 AHSLSE+ Sbjct: 129 AHSLSEE 135>NP_071751 Length = 736 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AHSLSEQ 8 AHSLSE+ Sbjct: 129 AHSLSEE 135>NP_001139761 Length = 697 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AHSLSEQ 8 AHSLSE+ Sbjct: 129 AHSLSEE 135>NP_001274324 Length = 1688 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AHSLSEQA 9 AH+L EQA Sbjct: 1316 AHTLDEQA 1323>XP_006712547 Length = 1674 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AHSLSEQA 9 AH+L EQA Sbjct: 1308 AHTLDEQA 1315>NP_003099 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NAHSLSEQ 8 +AHS SEQ Sbjct: 372 SAHSASEQ 379>NP_653250 Length = 276 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NAHSLSEQA 9 N+HSLS Q+ Sbjct: 182 NSHSLSLQS 190>XP_006716571 Length = 116 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NAHSLSEQA 9 N+HSLS Q+ Sbjct: 22 NSHSLSLQS 30>XP_006716570 Length = 290 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NAHSLSEQA 9 N+HSLS Q+ Sbjct: 196 NSHSLSLQS 204>XP_005250852 Length = 294 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NAHSLSEQA 9 N+HSLS Q+ Sbjct: 200 NSHSLSLQS 208>XP_005250851 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NAHSLSEQA 9 N+HSLS Q+ Sbjct: 201 NSHSLSLQS 209>NP_689755 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AHSLSEQA 9 AH+++EQA Sbjct: 323 AHAVTEQA 330>NP_001123361 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NAHSLSEQ 8 N HSLS Q Sbjct: 129 NIHSLSPQ 136>NP_001913 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NAHSLSEQ 8 N HSLS Q Sbjct: 129 NIHSLSPQ 136>XP_006714215 Length = 3544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NAHSLSEQ 8 N HSLS Q Sbjct: 2316 NKHSLSTQ 2323>XP_006714214 Length = 3544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NAHSLSEQ 8 N HSLS Q Sbjct: 2316 NKHSLSTQ 2323>XP_005262915 Length = 3544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NAHSLSEQ 8 N HSLS Q Sbjct: 2316 NKHSLSTQ 2323>XP_006714174 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AHSLSEQA 9 AH+++EQA Sbjct: 323 AHAVTEQA 330>NP_055806 Length = 3526 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NAHSLSEQ 8 N HSLS Q Sbjct: 2298 NKHSLSTQ 2305>NP_055731 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NAHSLSEQA 9 N HSLS ++ Sbjct: 1302 NLHSLSSES 1310>NP_001128625 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AHSLSEQA 9 AH+ SEQ+ Sbjct: 100 AHNFSEQS 107>NP_036553 Length = 1914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HSLSEQA 9 HSL++QA Sbjct: 641 HSLNDQA 647>NP_001036037 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAHSLSEQA 9 ++HS SE+A Sbjct: 20 SSHSASEEA 28>NP_001262 Length = 1828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAHSLSEQA 9 ++HS SE+A Sbjct: 20 SSHSASEEA 28>XP_005273523 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AHSLSEQA 9 AH+ SEQ+ Sbjct: 100 AHNFSEQS 107>XP_006716387 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AHSLSEQA 9 AH+ SEQ+ Sbjct: 100 AHNFSEQS 107>XP_005273522 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AHSLSEQA 9 AH+ SEQ+ Sbjct: 100 AHNFSEQS 107>XP_005273521 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AHSLSEQA 9 AH+ SEQ+ Sbjct: 110 AHNFSEQS 117>XP_005273520 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AHSLSEQA 9 AH+ SEQ+ Sbjct: 110 AHNFSEQS 117>XP_006716386 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AHSLSEQA 9 AH+ SEQ+ Sbjct: 110 AHNFSEQS 117>NP_001121903 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AHSLSEQA 9 AH+ SEQ+ Sbjct: 100 AHNFSEQS 107>NP_001128626 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AHSLSEQA 9 AH+ SEQ+ Sbjct: 100 AHNFSEQS 107>NP_056174 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AHSLSEQA 9 AH+ SEQ+ Sbjct: 100 AHNFSEQS 107Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.290 0.0989 0.239 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 554,866 Number of extensions: 879 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |