Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 17 2528 NP_001276915 16 7355 NP_060328 16 7355 NP_694539 16 7355 NP_001180404 16 7355 NP_001129101 16 7355 XP_006720657 16 7355 XP_005254579 16 7355 XP_005254578 16 7355 XP_006720656 16 7355 NP_054767 15 9605 NP_057411 15 9605 XP_005261690 15 9605 XP_005255514 15 9605 XP_006720977 15 9605 XP_006720976 15 9605 XP_006720975 15 9605 XP_005255512 15 9605 XP_006720974 15 9605 XP_005255510 15 9605 XP_006720973 15 9605 XP_006720972 15 9605 XP_006720971 15 9605 XP_005255508 15 9605 XP_005255509 15 9605>NP_004351 Length = 882 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 NAAIA TIL Sbjct: 297 NAAIAYTIL 305>NP_001276915 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NAAIANTI 8 N AIANT+ Sbjct: 164 NDAIANTL 171>NP_060328 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NAAIANTI 8 N AIANT+ Sbjct: 265 NDAIANTL 272>NP_694539 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NAAIANT 7 NAA++NT Sbjct: 619 NAAVSNT 625>NP_001180404 Length = 738 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NAAIANT 7 NAA++NT Sbjct: 588 NAAVSNT 594>NP_001129101 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NAAIANT 7 NAA++NT Sbjct: 619 NAAVSNT 625>XP_006720657 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NAAIANTI 8 N AIANT+ Sbjct: 265 NDAIANTL 272>XP_005254579 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NAAIANTI 8 N AIANT+ Sbjct: 265 NDAIANTL 272>XP_005254578 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NAAIANTI 8 N AIANT+ Sbjct: 265 NDAIANTL 272>XP_006720656 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NAAIANTI 8 N AIANT+ Sbjct: 265 NDAIANTL 272>NP_054767 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 N+A +NT+L Sbjct: 755 NSASSNTVL 763>NP_057411 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NAAIAN 6 NAAIAN Sbjct: 274 NAAIAN 279>XP_005261690 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NAAIAN 6 NAAIAN Sbjct: 206 NAAIAN 211>XP_005255514 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 N+A +NT+L Sbjct: 734 NSASSNTVL 742>XP_006720977 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 N+A +NT+L Sbjct: 755 NSASSNTVL 763>XP_006720976 Length = 1053 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 N+A +NT+L Sbjct: 805 NSASSNTVL 813>XP_006720975 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 N+A +NT+L Sbjct: 776 NSASSNTVL 784>XP_005255512 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 N+A +NT+L Sbjct: 794 NSASSNTVL 802>XP_006720974 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 N+A +NT+L Sbjct: 805 NSASSNTVL 813>XP_005255510 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 N+A +NT+L Sbjct: 805 NSASSNTVL 813>XP_006720973 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 N+A +NT+L Sbjct: 805 NSASSNTVL 813>XP_006720972 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 N+A +NT+L Sbjct: 805 NSASSNTVL 813>XP_006720971 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 N+A +NT+L Sbjct: 805 NSASSNTVL 813>XP_005255508 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 N+A +NT+L Sbjct: 805 NSASSNTVL 813>XP_005255509 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAAIANTIL 9 N+A +NT+L Sbjct: 805 NSASSNTVL 813Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.123 0.301 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 237,823 Number of extensions: 247 Number of successful extensions: 25 Number of sequences better than 10000.0: 25 Number of HSP's gapped: 25 Number of HSP's successfully gapped: 25 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |