Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000360 18 1135 XP_005268094 18 1135 NP_001263629 17 2528 NP_612202 17 2528 NP_000224 17 2528 XP_005264366 17 2528 XP_006712078 17 2528 NP_852111 17 3301 NP_000136 17 3301 NP_775922 17 4312 NP_001005213 16 5631 NP_001013376 16 5631 NP_065394 16 7355 NP_076411 16 7355 NP_001004479 16 7355 NP_000733 15 9605 NP_060606 15 9605 NP_001243502 15 9605 NP_000735 15 9605 NP_005497 15 9605 NP_001269384 15 9605 NP_001191184 15 9605 NP_002502 15 9605 NP_001245213 15 9605 XP_005260248 15 9605 XP_006720535 15 9605 XP_005254948 15 9605 XP_005254946 15 9605 XP_005273454 15 9605 XP_006716346 15 9605 XP_006716345 15 9605 NP_001138516 15 9605 NP_037404 15 9605>NP_000360 Length = 764 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 MYLLLI SV Sbjct: 465 MYLLLIASV 473>XP_005268094 Length = 764 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 MYLLLI SV Sbjct: 465 MYLLLIASV 473>NP_001263629 Length = 891 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 +YLL ITSV Sbjct: 418 VYLLFITSV 426>NP_612202 Length = 892 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 +YLL ITSV Sbjct: 418 VYLLFITSV 426>NP_000224 Length = 699 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 +YLLLI SV Sbjct: 410 LYLLLIASV 418>XP_005264366 Length = 380 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 +YLLLI SV Sbjct: 91 LYLLLIASV 99>XP_006712078 Length = 389 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 +YLLLI SV Sbjct: 100 LYLLLIASV 108>NP_852111 Length = 669 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 +YLLLI SV Sbjct: 387 IYLLLIASV 395>NP_000136 Length = 695 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 +YLLLI SV Sbjct: 413 IYLLLIASV 421>NP_775922 Length = 6996 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MYLLLITSV 9 MYL+++TS+ Sbjct: 2639 MYLVVVTSL 2647>NP_001005213 Length = 305 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YLLLITSV 9 YL +ITSV Sbjct: 217 YLFIITSV 224>NP_001013376 Length = 305 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YLLLITSV 9 YL +ITSV Sbjct: 217 YLFIITSV 224>NP_065394 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YLLLITS 8 Y+LL+TS Sbjct: 355 YILLVTS 361>NP_076411 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 + LLL+TSV Sbjct: 131 LVLLLVTSV 139>NP_001004479 Length = 324 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YLLLITSV 9 Y+LL+T+V Sbjct: 228 YILLLTAV 235>NP_000733 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 ++LLLIT + Sbjct: 309 VFLLLITEI 317>NP_060606 Length = 3477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 MY+ ++TSV Sbjct: 1651 MYIHILTSV 1659>NP_001243502 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 ++LLLIT + Sbjct: 111 VFLLLITEI 119>NP_000735 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 ++LLLIT + Sbjct: 287 VFLLLITEI 295>NP_005497 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLLITSV 9 LLL+TSV Sbjct: 15 LLLVTSV 21>NP_001269384 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 ++LLLIT + Sbjct: 294 VFLLLITEI 302>NP_001191184 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLLITSV 9 LLL+TSV Sbjct: 15 LLLVTSV 21>NP_002502 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MYLLLIT 7 +YLL+IT Sbjct: 49 LYLLIIT 55>NP_001245213 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MYLLLIT 7 MY+L+IT Sbjct: 139 MYVLMIT 145>XP_005260248 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 ++LLLIT + Sbjct: 111 VFLLLITEI 119>XP_006720535 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 MYLLLI 6 MYLLLI Sbjct: 176 MYLLLI 181>XP_005254948 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 MYLLLI 6 MYLLLI Sbjct: 61 MYLLLI 66>XP_005254946 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 MYLLLI 6 MYLLLI Sbjct: 176 MYLLLI 181>XP_005273454 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 ++LLLIT + Sbjct: 150 VFLLLITEI 158>XP_006716346 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 ++LLLIT + Sbjct: 206 VFLLLITEI 214>XP_006716345 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MYLLLITSV 9 ++LLLIT + Sbjct: 309 VFLLLITEI 317>NP_001138516 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 MYLLLI 6 MYLLLI Sbjct: 176 MYLLLI 181>NP_037404 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 MYLLLI 6 MYLLLI Sbjct: 176 MYLLLI 181Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.150 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 343,431 Number of extensions: 520 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |