Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1482 XP_006718908 18 1482 XP_005271621 18 1482 XP_006718907 18 1482 XP_006718906 18 1482 XP_005271619 18 1482 XP_005271618 18 1482 XP_005261914 17 4312 NP_004277 17 4312 NP_004777 16 5631 XP_006722644 16 5631 XP_006722643 16 5631 XP_006712658 16 5631 NP_001185871 16 7355 NP_001185873 16 7355 NP_065944 16 7355 NP_036450 16 7355 NP_076994 16 7355 XP_006722475 16 7355 XP_005258281 16 7355 XP_006722474 16 7355 XP_005258278 16 7355 XP_005258275 16 7355 XP_005258274 16 7355 XP_006722468 16 7355 XP_005258273 16 7355 XP_006722467 16 7355 XP_006722466 16 7355 XP_006722465 16 7355 XP_006722464 16 7355 XP_006722462 16 7355 XP_005258264 16 7355 XP_006722461 16 7355 XP_006722460 16 7355 XP_006722459 16 7355 XP_006722458 16 7355 XP_005254133 16 7355 XP_005254132 16 7355 XP_005254131 16 7355 XP_006713947 16 7355 NP_002887 15 9605 NP_001185773 15 9605 NP_001185772 15 9605 NP_005899 15 9605 NP_001273145 15 9605 NP_005688 15 9605 NP_113680 15 9605 NP_061969 15 9605 NP_001273064 15 9605 XP_006720432 15 9605 XP_006715187 15 9605 NP_803875 15 9605>NP_000042 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 MVKL VNLL Sbjct: 1644 MVKLVVNLL 1652>XP_006718908 Length = 1708 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 MVKL VNLL Sbjct: 296 MVKLVVNLL 304>XP_005271621 Length = 2708 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 MVKL VNLL Sbjct: 1296 MVKLVVNLL 1304>XP_006718907 Length = 3050 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 MVKL VNLL Sbjct: 1638 MVKLVVNLL 1646>XP_006718906 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 MVKL VNLL Sbjct: 1644 MVKLVVNLL 1652>XP_005271619 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 MVKL VNLL Sbjct: 1644 MVKLVVNLL 1652>XP_005271618 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 MVKL VNLL Sbjct: 1644 MVKLVVNLL 1652>XP_005261914 Length = 557 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MVKLFVNLL 9 ++K+F+NLL Sbjct: 263 LLKMFLNLL 271>NP_004277 Length = 669 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MVKLFVNLL 9 ++K+F+NLL Sbjct: 375 LLKMFLNLL 383>NP_004777 Length = 289 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VKLFVNL 8 VK+F+NL Sbjct: 194 VKIFINL 200>XP_006722644 Length = 255 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VKLFVNL 8 VK+F+NL Sbjct: 194 VKIFINL 200>XP_006722643 Length = 292 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VKLFVNL 8 VK+F+NL Sbjct: 194 VKIFINL 200>XP_006712658 Length = 244 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 M+KLF+ LL Sbjct: 1 MLKLFMTLL 9>NP_001185871 Length = 452 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 61 LIKLYVNQL 69>NP_001185873 Length = 395 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 61 LIKLYVNQL 69>NP_065944 Length = 1701 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 + +LFVNL+ Sbjct: 322 LAQLFVNLM 330>NP_036450 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKLFVNLL 9 VKLF N+L Sbjct: 229 VKLFPNML 236>NP_076994 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKLFVNL 8 V+LFVNL Sbjct: 230 VELFVNL 236>XP_006722475 Length = 443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 61 LIKLYVNQL 69>XP_005258281 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 61 LIKLYVNQL 69>XP_006722474 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 64 LIKLYVNQL 72>XP_005258278 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 379 LIKLYVNQL 387>XP_005258275 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 379 LIKLYVNQL 387>XP_005258274 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 379 LIKLYVNQL 387>XP_006722468 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 382 LIKLYVNQL 390>XP_005258273 Length = 770 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 379 LIKLYVNQL 387>XP_006722467 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 382 LIKLYVNQL 390>XP_006722466 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 382 LIKLYVNQL 390>XP_006722465 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 382 LIKLYVNQL 390>XP_006722464 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 382 LIKLYVNQL 390>XP_006722462 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 382 LIKLYVNQL 390>XP_005258264 Length = 818 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 379 LIKLYVNQL 387>XP_006722461 Length = 821 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 382 LIKLYVNQL 390>XP_006722460 Length = 821 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 382 LIKLYVNQL 390>XP_006722459 Length = 821 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 382 LIKLYVNQL 390>XP_006722458 Length = 821 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVKLFVNLL 9 ++KL+VN L Sbjct: 382 LIKLYVNQL 390>XP_005254133 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKLFVNL 8 V+LFVNL Sbjct: 11 VELFVNL 17>XP_005254132 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKLFVNL 8 V+LFVNL Sbjct: 230 VELFVNL 236>XP_005254131 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKLFVNL 8 V+LFVNL Sbjct: 204 VELFVNL 210>XP_006713947 Length = 738 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKLFVNLL 9 VKLF N+L Sbjct: 229 VKLFPNML 236>NP_002887 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MVKLFVNLL 9 MVKLF+ L Sbjct: 1 MVKLFIGNL 9>NP_001185773 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MVKLFVNLL 9 MVKLF+ L Sbjct: 1 MVKLFIGNL 9>NP_001185772 Length = 143 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MVKLFVNLL 9 MVKLF+ L Sbjct: 1 MVKLFIGNL 9>NP_005899 Length = 879 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MVKLFVNL 8 +V+LFVN+ Sbjct: 274 IVELFVNI 281>NP_001273145 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 MVKLFVNLL 9 ++K+F+N+L Sbjct: 296 LLKVFLNIL 304>NP_005688 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKLFVNLL 9 V LF+NLL Sbjct: 161 VTLFLNLL 168>NP_113680 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MVKLFVNLL 9 MVKLF+ L Sbjct: 1 MVKLFIGNL 9>NP_061969 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 MVKLFVNLL 9 ++K+F+N+L Sbjct: 384 LLKVFLNIL 392>NP_001273064 Length = 143 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MVKLFVNLL 9 MVKLF+ L Sbjct: 1 MVKLFIGNL 9>XP_006720432 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKLFVNLL 9 V LF+NLL Sbjct: 204 VTLFLNLL 211>XP_006715187 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 MVKLFVNLL 9 ++K+F+N+L Sbjct: 336 LLKVFLNIL 344>NP_803875 Length = 4243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VKLFVNLL 9 VK+FVN + Sbjct: 1894 VKIFVNTI 1901Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.348 0.158 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 342,387 Number of extensions: 503 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |