Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_000480 16 5631 NP_612114 16 5631 NP_937801 16 5631 NP_001026850 16 5631 NP_004341 16 5631 NP_078966 16 5631 NP_001013725 16 5631 NP_060726 16 5631 NP_001138624 16 5631 NP_937821 16 5631 NP_689628 16 5631 NP_937802 16 5631 NP_000239 16 5631 NP_006713 16 5631 NP_056386 16 5631 NP_001010854 16 5631 XP_006724730 16 5631 XP_005262214 16 5631 XP_005262213 16 5631 XP_006724729 16 5631 XP_005262212 16 5631 XP_005262211 16 5631 XP_005262210 16 5631 XP_005254450 16 5631 XP_005254449 16 5631 XP_005267424 16 5631 XP_006720122 16 5631 XP_006720121 16 5631 XP_005273458 16 5631 XP_005273457 16 5631 XP_006716349 16 5631 XP_006716177 16 5631 XP_006715520 16 5631 XP_006713227 16 5631 XP_005264812 16 5631 XP_005264811 16 5631 XP_005246081 16 5631 NP_001093879 16 5631 NP_001171896 16 5631 NP_937820 16 5631 NP_620063 16 7355 NP_079079 16 7355 NP_001165335 16 7355 NP_000183 15 9605 NP_001136233 15 9605 NP_852259 15 9605 NP_542448 15 9605 NP_001092805 15 9605 NP_055574 15 9605 NP_150628 15 9605 XP_005254813 15 9605 XP_006716479 15 9605 NP_543146 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MSLSTTDHT 9 MS STTDHT Sbjct: 2131 MSPSTTDHT 2139>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MSLSTTDHT 9 MS STTDHT Sbjct: 1926 MSPSTTDHT 1934>NP_000480 Length = 2492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSLSTTDHT 9 MSLS+ D+T Sbjct: 1920 MSLSSDDYT 1928>NP_612114 Length = 2454 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSLSTTDHT 9 MSLS+ D+T Sbjct: 1882 MSLSSDDYT 1890>NP_937801 Length = 413 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 MS+ T+HT Sbjct: 404 MSMEETEHT 412>NP_001026850 Length = 429 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLSTTDH 8 SLSTT H Sbjct: 232 SLSTTSH 238>NP_004341 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLSTTDH 8 SLSTT H Sbjct: 218 SLSTTSH 224>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLSTTDH 8 SLSTT H Sbjct: 7745 SLSTTSH 7751>NP_001013725 Length = 1649 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SLSTTDHT 9 SLS DHT Sbjct: 205 SLSNQDHT 212>NP_060726 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 +SLS T HT Sbjct: 334 VSLSLTSHT 342>NP_001138624 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 +S STT HT Sbjct: 154 VSSSTTSHT 162>NP_937821 Length = 357 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 MS+ T+HT Sbjct: 348 MSMEETEHT 356>NP_689628 Length = 397 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 +S STT HT Sbjct: 179 VSSSTTSHT 187>NP_937802 Length = 520 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 MS+ T+HT Sbjct: 511 MSMEETEHT 519>NP_000239 Length = 419 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 MS+ T+HT Sbjct: 410 MSMEETEHT 418>NP_006713 Length = 519 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 MS+ T+HT Sbjct: 510 MSMEETEHT 518>NP_056386 Length = 1112 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLSTTDHT 9 SLS+T HT Sbjct: 898 SLSSTHHT 905>NP_001010854 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLSTTDH 8 SLS TDH Sbjct: 509 SLSPTDH 515>XP_006724730 Length = 2399 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSLSTTDHT 9 MSLS+ D+T Sbjct: 1827 MSLSSDDYT 1835>XP_005262214 Length = 2424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSLSTTDHT 9 MSLS+ D+T Sbjct: 1852 MSLSSDDYT 1860>XP_005262213 Length = 2437 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSLSTTDHT 9 MSLS+ D+T Sbjct: 1865 MSLSSDDYT 1873>XP_006724729 Length = 2453 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSLSTTDHT 9 MSLS+ D+T Sbjct: 1881 MSLSSDDYT 1889>XP_005262212 Length = 2453 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSLSTTDHT 9 MSLS+ D+T Sbjct: 1881 MSLSSDDYT 1889>XP_005262211 Length = 2463 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSLSTTDHT 9 MSLS+ D+T Sbjct: 1891 MSLSSDDYT 1899>XP_005262210 Length = 2491 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSLSTTDHT 9 MSLS+ D+T Sbjct: 1919 MSLSSDDYT 1927>XP_005254450 Length = 1505 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SLSTTDHT 9 SLS DHT Sbjct: 205 SLSNQDHT 212>XP_005254449 Length = 1626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SLSTTDHT 9 SLS DHT Sbjct: 205 SLSNQDHT 212>XP_005267424 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLSTTDH 8 SLS TDH Sbjct: 251 SLSPTDH 257>XP_006720122 Length = 820 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLSTTDH 8 SLS TDH Sbjct: 415 SLSPTDH 421>XP_006720121 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLSTTDH 8 SLS TDH Sbjct: 517 SLSPTDH 523>XP_005273458 Length = 307 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 +S STT HT Sbjct: 89 VSSSTTSHT 97>XP_005273457 Length = 307 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 +S STT HT Sbjct: 89 VSSSTTSHT 97>XP_006716349 Length = 391 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 +S STT HT Sbjct: 179 VSSSTTSHT 187>XP_006716177 Length = 386 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLSTTDHT 9 S STT+HT Sbjct: 222 SPSTTEHT 229>XP_006715520 Length = 1056 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLSTTDHT 9 SLS+T HT Sbjct: 842 SLSSTHHT 849>XP_006713227 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 MS+ T+HT Sbjct: 465 MSMEETEHT 473>XP_005264812 Length = 510 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 MS+ T+HT Sbjct: 501 MSMEETEHT 509>XP_005264811 Length = 526 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 MS+ T+HT Sbjct: 517 MSMEETEHT 525>XP_005246081 Length = 429 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLSTTDH 8 SLSTT H Sbjct: 232 SLSTTSH 238>NP_001093879 Length = 1105 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLSTTDHT 9 SLS+T HT Sbjct: 891 SLSSTHHT 898>NP_001171896 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 MS+ T+HT Sbjct: 459 MSMEETEHT 467>NP_937820 Length = 504 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSLSTTDHT 9 MS+ T+HT Sbjct: 495 MSMEETEHT 503>NP_620063 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SLSTTDH 8 SLSTT H Sbjct: 56 SLSTTHH 62>NP_079079 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STTDHT 9 STT+HT Sbjct: 200 STTEHT 205>NP_001165335 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STTDHT 9 STT+HT Sbjct: 160 STTEHT 165>NP_000183 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 STTDH 8 STTDH Sbjct: 332 STTDH 336>NP_001136233 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 STTDH 8 STTDH Sbjct: 241 STTDH 245>NP_852259 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 STTDH 8 STTDH Sbjct: 332 STTDH 336>NP_542448 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 STTDH 8 STTDH Sbjct: 282 STTDH 286>NP_001092805 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 MSLSTTD 7 MSLST D Sbjct: 308 MSLSTAD 314>NP_055574 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 MSLSTTD 7 MSLST D Sbjct: 308 MSLSTAD 314>NP_150628 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 STTDH 8 STTDH Sbjct: 241 STTDH 245>XP_005254813 Length = 169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 STTDH 8 STTDH Sbjct: 94 STTDH 98>XP_006716479 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 MSLSTTD 7 MSLST D Sbjct: 308 MSLSTAD 314>NP_543146 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LSTTDH 8 LST+DH Sbjct: 41 LSTSDH 46Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.105 0.277 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 439,782 Number of extensions: 447 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |