Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001035351 18 1935 NP_001035350 18 1935 NP_006715 18 1935 NP_005913 18 1935 XP_005267046 18 1935 XP_005267045 18 1935 XP_005262843 18 1935 XP_005262842 18 1935 NP_001181966 17 2528 NP_001071174 17 2528 XP_006715535 17 2528 NP_001240317 17 4312 NP_001240316 17 4312 NP_006605 17 4312 XP_006713004 17 4312 XP_006713003 17 4312 XP_006713002 17 4312 XP_006713001 17 4312 NP_001274511 16 5631 NP_001274512 16 5631 NP_001781 16 5631 NP_002937 16 5631 XP_006714803 16 5631 XP_006714802 16 5631 XP_005272203 16 5631 XP_005272202 16 5631 XP_005246719 16 5631 XP_005246718 16 5631 XP_005246022 16 5631 NP_060556 16 5631 NP_004516 16 7355 NP_006763 16 7355 NP_892121 16 7355 NP_056311 16 7355 XP_006712591 16 7355 XP_006712590 16 7355 XP_006712589 16 7355 NP_002323 15 9605 NP_000607 15 9605 NP_001257545 15 9605 NP_002754 15 9605 NP_061834 15 9605 NP_001001895 15 9605 XP_006724076 15 9605 XP_006711518 15 9605 XP_005273252 15 9605 XP_005273253 15 9605 XP_005273251 15 9605>NP_001035351 Length = 783 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RCTASQLL 9 RCTA Q+L Sbjct: 656 RCTAGQIL 663>NP_001035350 Length = 766 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RCTASQLL 9 RCTA Q+L Sbjct: 639 RCTAGQIL 646>NP_006715 Length = 1558 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MRCTASQLL 9 MR TASQLL Sbjct: 1538 MRWTASQLL 1546>NP_005913 Length = 1608 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MRCTASQLL 9 MR TASQLL Sbjct: 1588 MRWTASQLL 1596>XP_005267046 Length = 1554 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MRCTASQLL 9 MR TASQLL Sbjct: 1534 MRWTASQLL 1542>XP_005267045 Length = 1604 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MRCTASQLL 9 MR TASQLL Sbjct: 1584 MRWTASQLL 1592>XP_005262843 Length = 765 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RCTASQLL 9 RCTA Q+L Sbjct: 638 RCTAGQIL 645>XP_005262842 Length = 782 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RCTASQLL 9 RCTA Q+L Sbjct: 655 RCTAGQIL 662>NP_001181966 Length = 904 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MRCTASQL 8 +RCT SQL Sbjct: 52 LRCTKSQL 59>NP_001071174 Length = 904 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MRCTASQL 8 +RCT SQL Sbjct: 52 LRCTKSQL 59>XP_006715535 Length = 946 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MRCTASQL 8 +RCT SQL Sbjct: 52 LRCTKSQL 59>NP_001240317 Length = 1171 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RCTASQLL 9 RCTAS L Sbjct: 325 RCTASNFL 332>NP_001240316 Length = 1208 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RCTASQLL 9 RCTAS L Sbjct: 309 RCTASNFL 316>NP_006605 Length = 1224 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RCTASQLL 9 RCTAS L Sbjct: 325 RCTASNFL 332>XP_006713004 Length = 1171 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RCTASQLL 9 RCTAS L Sbjct: 325 RCTASNFL 332>XP_006713003 Length = 1224 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RCTASQLL 9 RCTAS L Sbjct: 325 RCTASNFL 332>XP_006713002 Length = 1224 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RCTASQLL 9 RCTAS L Sbjct: 325 RCTASNFL 332>XP_006713001 Length = 1224 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RCTASQLL 9 RCTAS L Sbjct: 325 RCTASNFL 332>NP_001274511 Length = 473 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRCTASQLL 9 M+C+ +QLL Sbjct: 119 MKCSPAQLL 127>NP_001274512 Length = 551 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRCTASQLL 9 M+C+ +QLL Sbjct: 197 MKCSPAQLL 205>NP_001781 Length = 473 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRCTASQLL 9 M+C+ +QLL Sbjct: 119 MKCSPAQLL 127>NP_002937 Length = 270 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CTASQLL 9 CT SQLL Sbjct: 49 CTISQLL 55>XP_006714803 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRCTASQLL 9 M+C+ +QLL Sbjct: 8 MKCSPAQLL 16>XP_006714802 Length = 475 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRCTASQLL 9 M+C+ +QLL Sbjct: 121 MKCSPAQLL 129>XP_005272203 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRCTASQLL 9 M+C+ +QLL Sbjct: 136 MKCSPAQLL 144>XP_005272202 Length = 517 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRCTASQLL 9 M+C+ +QLL Sbjct: 197 MKCSPAQLL 205>XP_005246719 Length = 748 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RCTASQL 8 RC ASQL Sbjct: 526 RCIASQL 532>XP_005246718 Length = 785 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RCTASQL 8 RC ASQL Sbjct: 563 RCIASQL 569>XP_005246022 Length = 278 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CTASQLL 9 CT SQLL Sbjct: 57 CTISQLL 63>NP_060556 Length = 759 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RCTASQL 8 RC ASQL Sbjct: 537 RCIASQL 543>NP_004516 Length = 4655 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MRCTASQ 7 + CTASQ Sbjct: 1185 LNCTASQ 1191>NP_006763 Length = 1343 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MRCTASQL 8 ++CTAS L Sbjct: 529 IKCTASSL 536>NP_892121 Length = 1147 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RCTASQ 7 RCTAS+ Sbjct: 780 RCTASE 785>NP_056311 Length = 1812 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RCTASQ 7 RCTAS+ Sbjct: 780 RCTASE 785>XP_006712591 Length = 3308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MRCTASQ 7 + CTASQ Sbjct: 1185 LNCTASQ 1191>XP_006712590 Length = 3897 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MRCTASQ 7 + CTASQ Sbjct: 422 LNCTASQ 428>XP_006712589 Length = 4660 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MRCTASQ 7 + CTASQ Sbjct: 1185 LNCTASQ 1191>NP_002323 Length = 4544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CTASQLL 9 CTASQ + Sbjct: 3334 CTASQFV 3340>NP_000607 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MRCTASQ 7 + CTASQ Sbjct: 39 LTCTASQ 45>NP_001257545 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RCTASQLL 9 RC SQL+ Sbjct: 614 RCITSQLI 621>NP_002754 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RCTASQLL 9 RC SQL+ Sbjct: 614 RCITSQLI 621>NP_061834 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RCTASQL 8 RCTAS + Sbjct: 564 RCTASMV 570>NP_001001895 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RCTASQL 8 RCTAS + Sbjct: 526 RCTASMV 532>XP_006724076 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RCTASQL 8 RCTAS + Sbjct: 545 RCTASMV 551>XP_006711518 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RCTASQLL 9 RC SQL+ Sbjct: 614 RCITSQLI 621>XP_005273252 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RCTASQLL 9 RC SQL+ Sbjct: 614 RCITSQLI 621>XP_005273253 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RCTASQLL 9 RC SQL+ Sbjct: 614 RCITSQLI 621>XP_005273251 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RCTASQLL 9 RC SQL+ Sbjct: 614 RCITSQLI 621Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.127 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 462,589 Number of extensions: 316 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |