Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 390 XP_005271621 20 390 XP_006718907 20 390 XP_006718906 20 390 XP_005271619 20 390 XP_005271618 20 390 NP_001166953 17 4312 NP_001257903 17 4312 NP_057386 17 4312 NP_001243301 17 4312 NP_001243300 17 4312 NP_078956 17 4312 XP_006721269 17 4312 NP_001009612 16 5631 NP_002262 16 7355 XP_005254110 16 7355 XP_005254109 16 7355 XP_005254106 16 7355 NP_001177951 15 9605 NP_006556 15 9605 NP_001035203 15 9605 NP_074035 15 9605 NP_001035202 15 9605 NP_002465 15 9605 NP_001092880 15 9605 NP_001092881 15 9605 NP_055525 15 9605 NP_001139150 15 9605 NP_001171656 15 9605 NP_775936 15 9605 NP_001091995 15 9605 NP_060674 15 9605 XP_005255832 15 9605 XP_005266401 15 9605 XP_005266400 15 9605 XP_006714651 15 9605 XP_005270453 15 9605 XP_005270452 15 9605 XP_005270451 15 9605 NP_006836 15 9605 NP_001273616 15 9605 NP_001273615 15 9605>NP_000042 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MQVEDQSSM 9 M+VEDQSSM Sbjct: 847 MEVEDQSSM 855>XP_005271621 Length = 2708 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MQVEDQSSM 9 M+VEDQSSM Sbjct: 499 MEVEDQSSM 507>XP_006718907 Length = 3050 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MQVEDQSSM 9 M+VEDQSSM Sbjct: 847 MEVEDQSSM 855>XP_006718906 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MQVEDQSSM 9 M+VEDQSSM Sbjct: 847 MEVEDQSSM 855>XP_005271619 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MQVEDQSSM 9 M+VEDQSSM Sbjct: 847 MEVEDQSSM 855>XP_005271618 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MQVEDQSSM 9 M+VEDQSSM Sbjct: 847 MEVEDQSSM 855>NP_001166953 Length = 441 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MQVEDQSS 8 M+VEDQ S Sbjct: 30 MEVEDQDS 37>NP_001257903 Length = 5121 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QVEDQSSM 9 QVEDQ S+ Sbjct: 1306 QVEDQESL 1313>NP_057386 Length = 442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MQVEDQSS 8 M+VEDQ S Sbjct: 31 MEVEDQDS 38>NP_001243301 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 MQ+E+QSS Sbjct: 446 MQLEEQSS 453>NP_001243300 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 MQ+E+QSS Sbjct: 446 MQLEEQSS 453>NP_078956 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 MQ+E+QSS Sbjct: 446 MQLEEQSS 453>XP_006721269 Length = 5138 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QVEDQSSM 9 QVEDQ S+ Sbjct: 1323 QVEDQESL 1330>NP_001009612 Length = 122 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MQVEDQS 7 MQ++DQS Sbjct: 48 MQIQDQS 54>NP_002262 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MQVEDQSSM 9 +Q+E QSSM Sbjct: 115 IQMETQSSM 123>XP_005254110 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MQVEDQSSM 9 +Q+E QSSM Sbjct: 115 IQMETQSSM 123>XP_005254109 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MQVEDQSSM 9 +Q+E QSSM Sbjct: 115 IQMETQSSM 123>XP_005254106 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MQVEDQSSM 9 +Q+E QSSM Sbjct: 115 IQMETQSSM 123>NP_001177951 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 +QVEDQ++ Sbjct: 343 IQVEDQNT 350>NP_006556 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 +QVEDQ++ Sbjct: 671 IQVEDQNT 678>NP_001035203 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQVEDQSSM 9 +QVED+ M Sbjct: 1863 LQVEDERKM 1871>NP_074035 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQVEDQSSM 9 +QVED+ M Sbjct: 1856 LQVEDERKM 1864>NP_001035202 Length = 1945 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQVEDQSSM 9 +QVED+ M Sbjct: 1863 LQVEDERKM 1871>NP_002465 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQVEDQSSM 9 +QVED+ M Sbjct: 1856 LQVEDERKM 1864>NP_001092880 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MQVEDQS 7 +QVED+S Sbjct: 427 LQVEDES 433>NP_001092881 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MQVEDQS 7 +QVED+S Sbjct: 427 LQVEDES 433>NP_055525 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MQVEDQS 7 +QVED+S Sbjct: 427 LQVEDES 433>NP_001139150 Length = 1275 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VEDQSSM 9 VED SSM Sbjct: 149 VEDNSSM 155>NP_001171656 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MQVEDQS 7 +QVED+S Sbjct: 427 LQVEDES 433>NP_775936 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VEDQSSM 9 VED SSM Sbjct: 149 VEDNSSM 155>NP_001091995 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 +QV+D+SS Sbjct: 195 LQVKDESS 202>NP_060674 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 +QV+D+SS Sbjct: 194 LQVKDESS 201>XP_005255832 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 +QVEDQ++ Sbjct: 669 IQVEDQNT 676>XP_005266401 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 +QV+D+SS Sbjct: 147 LQVKDESS 154>XP_005266400 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 +QV+D+SS Sbjct: 189 LQVKDESS 196>XP_006714651 Length = 1280 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VEDQSSM 9 VED SSM Sbjct: 149 VEDNSSM 155>XP_005270453 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 MQ+E+Q+S Sbjct: 654 MQLEEQAS 661>XP_005270452 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 MQ+E+Q+S Sbjct: 667 MQLEEQAS 674>XP_005270451 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 MQ+E+Q+S Sbjct: 699 MQLEEQAS 706>NP_006836 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 MQ+E+Q+S Sbjct: 708 MQLEEQAS 715>NP_001273616 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 +QV+D+SS Sbjct: 194 LQVKDESS 201>NP_001273615 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQVEDQSS 8 +QV+D+SS Sbjct: 146 LQVKDESS 153Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.105 0.235 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 480,056 Number of extensions: 282 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |