Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001276866 20 299 NP_004439 20 299 NP_001276865 20 299 NP_001005862 20 299 XP_005257197 20 299 XP_006721828 20 299 NP_005219 18 1935 NP_003641 18 1935 NP_000236 17 2528 NP_001120972 17 2528 NP_775869 17 2528 XP_006719420 17 2528 XP_006716054 17 2528 XP_006716053 17 2528 XP_006716052 17 2528 XP_006716051 17 2528 NP_001036064 17 3301 NP_005226 17 3301 XP_006722222 17 3301 XP_006722221 17 3301 XP_006722220 17 3301 XP_006722219 17 3301 XP_006722218 17 3301 XP_006722217 17 3301 XP_006722216 17 3301 XP_006722215 17 3301 XP_006722214 17 3301 XP_005246434 17 3301 XP_005246433 17 3301 XP_005246432 17 3301 XP_006712427 17 3301 NP_004308 17 3301 NP_055053 17 3301 NP_071920 17 4312 NP_004954 17 4312 NP_892121 17 4312 NP_056311 17 4312 XP_006714351 17 4312 XP_005263235 17 4312 NP_001513 16 5631 NP_001156506 16 7355 NP_065812 16 7355 NP_443148 16 7355 XP_005257066 16 7355 XP_006721725 16 7355 XP_005257064 16 7355 XP_006721724 16 7355 XP_006721723 16 7355 NP_775267 15 9605 NP_775268 15 9605 NP_775266 15 9605 NP_004094 15 9605 XP_005273505 15 9605 XP_005273504 15 9605>NP_001276866 Length = 1055 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MQIVKGMSY 9 MQI KGMSY Sbjct: 827 MQIAKGMSY 835>NP_004439 Length = 1255 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MQIVKGMSY 9 MQI KGMSY Sbjct: 827 MQIAKGMSY 835>NP_001276865 Length = 1240 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MQIVKGMSY 9 MQI KGMSY Sbjct: 812 MQIAKGMSY 820>NP_001005862 Length = 1225 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MQIVKGMSY 9 MQI KGMSY Sbjct: 797 MQIAKGMSY 805>XP_005257197 Length = 1225 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MQIVKGMSY 9 MQI KGMSY Sbjct: 797 MQIAKGMSY 805>XP_006721828 Length = 1336 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MQIVKGMSY 9 MQI KGMSY Sbjct: 908 MQIAKGMSY 916>NP_005219 Length = 1210 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MQIVKGMSY 9 +QI KGM+Y Sbjct: 819 VQIAKGMNY 827>NP_003641 Length = 145 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MQIVKGMSY 9 +QIVKG+ Y Sbjct: 80 VQIVKGLKY 88>NP_000236 Length = 1390 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +Q+ KGM Y Sbjct: 1186 LQVAKGMKY 1194>NP_001120972 Length = 1408 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +Q+ KGM Y Sbjct: 1204 LQVAKGMKY 1212>NP_775869 Length = 921 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 +IVKGM Y Sbjct: 740 EIVKGMGY 747>XP_006719420 Length = 949 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 +IVKGM Y Sbjct: 769 EIVKGMGY 776>XP_006716054 Length = 960 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +Q+ KGM Y Sbjct: 756 LQVAKGMKY 764>XP_006716053 Length = 960 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +Q+ KGM Y Sbjct: 756 LQVAKGMKY 764>XP_006716052 Length = 1409 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +Q+ KGM Y Sbjct: 1205 LQVAKGMKY 1213>XP_006716051 Length = 1427 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +Q+ KGM Y Sbjct: 1223 LQVAKGMKY 1231>NP_001036064 Length = 1292 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI KGM Y Sbjct: 825 VQIAKGMMY 833>NP_005226 Length = 1308 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI KGM Y Sbjct: 825 VQIAKGMMY 833>XP_006722222 Length = 592 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 +I+KGM Y Sbjct: 358 EIIKGMGY 365>XP_006722221 Length = 791 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 +I+KGM Y Sbjct: 557 EIIKGMGY 564>XP_006722220 Length = 809 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 +I+KGM Y Sbjct: 575 EIIKGMGY 582>XP_006722219 Length = 852 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 +I+KGM Y Sbjct: 694 EIIKGMGY 701>XP_006722218 Length = 877 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 +I+KGM Y Sbjct: 694 EIIKGMGY 701>XP_006722217 Length = 887 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 +I+KGM Y Sbjct: 680 EIIKGMGY 687>XP_006722216 Length = 901 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 +I+KGM Y Sbjct: 694 EIIKGMGY 701>XP_006722215 Length = 914 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 +I+KGM Y Sbjct: 680 EIIKGMGY 687>XP_006722214 Length = 928 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 +I+KGM Y Sbjct: 694 EIIKGMGY 701>XP_005246434 Length = 1282 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI KGM Y Sbjct: 815 VQIAKGMMY 823>XP_005246433 Length = 1298 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI KGM Y Sbjct: 815 VQIAKGMMY 823>XP_005246432 Length = 1307 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI KGM Y Sbjct: 840 VQIAKGMMY 848>XP_006712427 Length = 1323 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI KGM Y Sbjct: 840 VQIAKGMMY 848>NP_004308 Length = 348 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MQIVKGMSY 9 M++VKGM++ Sbjct: 152 MRLVKGMNF 160>NP_055053 Length = 762 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 +I+KGM Y Sbjct: 579 EIIKGMGY 586>NP_071920 Length = 700 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI+KG Y Sbjct: 466 LQIIKGKDY 474>NP_004954 Length = 1073 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IVKGMSY 9 I KGMSY Sbjct: 597 IAKGMSY 603>NP_892121 Length = 1147 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IVKGMSY 9 I+KG+SY Sbjct: 411 IIKGLSY 417>NP_056311 Length = 1812 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IVKGMSY 9 I+KG+SY Sbjct: 411 IIKGLSY 417>XP_006714351 Length = 682 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI+KG Y Sbjct: 466 LQIIKGKDY 474>XP_005263235 Length = 682 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI+KG Y Sbjct: 466 LQIIKGKDY 474>NP_001513 Length = 1108 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 + ++KGM Y Sbjct: 652 LDLIKGMKY 660>NP_001156506 Length = 1177 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQIVKGMS 8 +QIVKG++ Sbjct: 1092 LQIVKGLT 1099>NP_065812 Length = 1335 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MQIVKGMS 8 +QIVKG++ Sbjct: 1250 LQIVKGLT 1257>NP_443148 Length = 679 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 Q+V G+SY Sbjct: 239 QVVDGVSY 246>XP_005257066 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 Q+V G+SY Sbjct: 239 QVVDGVSY 246>XP_006721725 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 Q+V G+SY Sbjct: 172 QVVDGVSY 179>XP_005257064 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 Q+V G+SY Sbjct: 239 QVVDGVSY 246>XP_006721724 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 Q+V G+SY Sbjct: 239 QVVDGVSY 246>XP_006721723 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QIVKGMSY 9 Q+V G+SY Sbjct: 239 QVVDGVSY 246>NP_775267 Length = 967 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI K M+Y Sbjct: 531 LQICKAMAY 539>NP_775268 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI K M+Y Sbjct: 531 LQICKAMAY 539>NP_775266 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI K M+Y Sbjct: 531 LQICKAMAY 539>NP_004094 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI K M+Y Sbjct: 531 LQICKAMAY 539>XP_005273505 Length = 997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI K M+Y Sbjct: 531 LQICKAMAY 539>XP_005273504 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MQIVKGMSY 9 +QI K M+Y Sbjct: 531 LQICKAMAY 539Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.134 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 366,595 Number of extensions: 382 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |