Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006024 17 3301 XP_005258447 17 3301 XP_005273420 17 4312 NP_001099129 16 7355 NP_001136197 16 7355 XP_006710416 16 7355 XP_006710415 16 7355 XP_005270511 16 7355 XP_005270510 16 7355 XP_005270509 16 7355 XP_005270508 16 7355 NP_001010860 16 7355 NP_000120 15 9605 NP_001258949 15 9605 XP_006726459 15 9605 XP_006726458 15 9605 XP_005276270 15 9605 XP_005276269 15 9605 XP_005276268 15 9605 XP_006726457 15 9605 XP_003960344 15 9605 XP_006720386 15 9605 XP_006720385 15 9605 XP_005268275 15 9605 XP_006715073 15 9605 XP_006712956 15 9605 XP_006712955 15 9605 XP_006712954 15 9605 XP_006712953 15 9605 XP_006712952 15 9605 XP_006712951 15 9605 XP_006710200 15 9605 XP_006710199 15 9605 XP_006710198 15 9605 XP_006710197 15 9605>NP_006024 Length = 500 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MKSETSRTV 9 MK+ETS TV Sbjct: 489 MKNETSPTV 497>XP_005258447 Length = 536 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MKSETSRTV 9 MK+ETS TV Sbjct: 525 MKNETSPTV 533>XP_005273420 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 MKSETSRT 8 M+S+TSRT Sbjct: 1 MESQTSRT 8>NP_001099129 Length = 624 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MKSETSR 7 MKS+TSR Sbjct: 321 MKSKTSR 327>NP_001136197 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KSETSRTV 9 KSETS+++ Sbjct: 467 KSETSKSI 474>XP_006710416 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MKSETSR 7 MKS+TSR Sbjct: 1 MKSKTSR 7>XP_006710415 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MKSETSR 7 MKS+TSR Sbjct: 1 MKSKTSR 7>XP_005270511 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MKSETSR 7 MKS+TSR Sbjct: 1 MKSKTSR 7>XP_005270510 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MKSETSR 7 MKS+TSR Sbjct: 321 MKSKTSR 327>XP_005270509 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MKSETSR 7 MKS+TSR Sbjct: 321 MKSKTSR 327>XP_005270508 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MKSETSR 7 MKS+TSR Sbjct: 321 MKSKTSR 327>NP_001010860 Length = 674 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MKSETSR 7 +KSETSR Sbjct: 107 VKSETSR 113>NP_000120 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SETSRT 8 SETSRT Sbjct: 2 SETSRT 7>NP_001258949 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SETSRT 8 SETSRT Sbjct: 461 SETSRT 466>XP_006726459 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 880 ETSRTV 885Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 982 ETSRTV 987Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1084 ETSRTV 1089>XP_006726458 Length = 1206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 880 ETSRTV 885Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 982 ETSRTV 987Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1084 ETSRTV 1089>XP_005276270 Length = 1206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 880 ETSRTV 885Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 982 ETSRTV 987Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1084 ETSRTV 1089>XP_005276269 Length = 1206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 880 ETSRTV 885Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 982 ETSRTV 987Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1084 ETSRTV 1089>XP_005276268 Length = 1368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 880 ETSRTV 885Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 982 ETSRTV 987Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1084 ETSRTV 1089Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1186 ETSRTV 1191>XP_006726457 Length = 1490 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 880 ETSRTV 885Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 982 ETSRTV 987Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1084 ETSRTV 1089Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1186 ETSRTV 1191>XP_003960344 Length = 2085 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 880 ETSRTV 885Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 982 ETSRTV 987Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1084 ETSRTV 1089Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1186 ETSRTV 1191>XP_006720386 Length = 1571 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SETSRT 8 SETSRT Sbjct: 1395 SETSRT 1400>XP_006720385 Length = 1683 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SETSRT 8 SETSRT Sbjct: 1507 SETSRT 1512>XP_005268275 Length = 1684 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SETSRT 8 SETSRT Sbjct: 1508 SETSRT 1513>XP_006715073 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SETSRT 8 SETSRT Sbjct: 2 SETSRT 7>XP_006712956 Length = 1240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 914 ETSRTV 919Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1016 ETSRTV 1021Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1118 ETSRTV 1123>XP_006712955 Length = 1240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 914 ETSRTV 919Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1016 ETSRTV 1021Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1118 ETSRTV 1123>XP_006712954 Length = 1240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 914 ETSRTV 919Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1016 ETSRTV 1021Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1118 ETSRTV 1123>XP_006712953 Length = 1402 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 914 ETSRTV 919Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1016 ETSRTV 1021Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1118 ETSRTV 1123Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1220 ETSRTV 1225>XP_006712952 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 914 ETSRTV 919Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1016 ETSRTV 1021Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1118 ETSRTV 1123Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1220 ETSRTV 1225>XP_006712951 Length = 2119 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 914 ETSRTV 919Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1016 ETSRTV 1021Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1118 ETSRTV 1123Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 1220 ETSRTV 1225>XP_006710200 Length = 1119 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 835 ETSRTV 840Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 937 ETSRTV 942>XP_006710199 Length = 1241 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 835 ETSRTV 840Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 937 ETSRTV 942>XP_006710198 Length = 1314 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 835 ETSRTV 840Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 937 ETSRTV 942>XP_006710197 Length = 1836 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 835 ETSRTV 840Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSRTV 9 ETSRTV Sbjct: 937 ETSRTV 942Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.100 0.222 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 349,556 Number of extensions: 483 Number of successful extensions: 71 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |