Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_006024                                                              17    3301
XP_005258447                                                           17    3301
XP_005273420                                                           17    4312
NP_001099129                                                           16    7355
NP_001136197                                                           16    7355
XP_006710416                                                           16    7355
XP_006710415                                                           16    7355
XP_005270511                                                           16    7355
XP_005270510                                                           16    7355
XP_005270509                                                           16    7355
XP_005270508                                                           16    7355
NP_001010860                                                           16    7355
NP_000120                                                              15    9605
NP_001258949                                                           15    9605
XP_006726459                                                           15    9605
XP_006726458                                                           15    9605
XP_005276270                                                           15    9605
XP_005276269                                                           15    9605
XP_005276268                                                           15    9605
XP_006726457                                                           15    9605
XP_003960344                                                           15    9605
XP_006720386                                                           15    9605
XP_006720385                                                           15    9605
XP_005268275                                                           15    9605
XP_006715073                                                           15    9605
XP_006712956                                                           15    9605
XP_006712955                                                           15    9605
XP_006712954                                                           15    9605
XP_006712953                                                           15    9605
XP_006712952                                                           15    9605
XP_006712951                                                           15    9605
XP_006710200                                                           15    9605
XP_006710199                                                           15    9605
XP_006710198                                                           15    9605
XP_006710197                                                           15    9605
>NP_006024
          Length = 500

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   MKSETSRTV 9
           MK+ETS TV
Sbjct: 489 MKNETSPTV 497
>XP_005258447
          Length = 536

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   MKSETSRTV 9
           MK+ETS TV
Sbjct: 525 MKNETSPTV 533
>XP_005273420
          Length = 396

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1 MKSETSRT 8
         M+S+TSRT
Sbjct: 1 MESQTSRT 8
>NP_001099129
          Length = 624

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   MKSETSR 7
           MKS+TSR
Sbjct: 321 MKSKTSR 327
>NP_001136197
          Length = 691

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   KSETSRTV 9
           KSETS+++
Sbjct: 467 KSETSKSI 474
>XP_006710416
          Length = 304

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1 MKSETSR 7
         MKS+TSR
Sbjct: 1 MKSKTSR 7
>XP_006710415
          Length = 304

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1 MKSETSR 7
         MKS+TSR
Sbjct: 1 MKSKTSR 7
>XP_005270511
          Length = 304

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1 MKSETSR 7
         MKS+TSR
Sbjct: 1 MKSKTSR 7
>XP_005270510
          Length = 335

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   MKSETSR 7
           MKS+TSR
Sbjct: 321 MKSKTSR 327
>XP_005270509
          Length = 349

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   MKSETSR 7
           MKS+TSR
Sbjct: 321 MKSKTSR 327
>XP_005270508
          Length = 430

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   MKSETSR 7
           MKS+TSR
Sbjct: 321 MKSKTSR 327
>NP_001010860
          Length = 674

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   MKSETSR 7
           +KSETSR
Sbjct: 107 VKSETSR 113
>NP_000120
          Length = 732

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3 SETSRT 8
         SETSRT
Sbjct: 2 SETSRT 7
>NP_001258949
          Length = 637

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   SETSRT 8
           SETSRT
Sbjct: 461 SETSRT 466
>XP_006726459
          Length = 1140

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 880 ETSRTV 885

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 982 ETSRTV 987

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1084 ETSRTV 1089
>XP_006726458
          Length = 1206

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 880 ETSRTV 885

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 982 ETSRTV 987

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1084 ETSRTV 1089
>XP_005276270
          Length = 1206

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 880 ETSRTV 885

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 982 ETSRTV 987

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1084 ETSRTV 1089
>XP_005276269
          Length = 1206

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 880 ETSRTV 885

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 982 ETSRTV 987

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1084 ETSRTV 1089
>XP_005276268
          Length = 1368

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 880 ETSRTV 885

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 982 ETSRTV 987

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1084 ETSRTV 1089

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1186 ETSRTV 1191
>XP_006726457
          Length = 1490

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 880 ETSRTV 885

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 982 ETSRTV 987

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1084 ETSRTV 1089

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1186 ETSRTV 1191
>XP_003960344
          Length = 2085

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 880 ETSRTV 885

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 982 ETSRTV 987

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1084 ETSRTV 1089

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1186 ETSRTV 1191
>XP_006720386
          Length = 1571

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    SETSRT 8
            SETSRT
Sbjct: 1395 SETSRT 1400
>XP_006720385
          Length = 1683

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    SETSRT 8
            SETSRT
Sbjct: 1507 SETSRT 1512
>XP_005268275
          Length = 1684

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    SETSRT 8
            SETSRT
Sbjct: 1508 SETSRT 1513
>XP_006715073
          Length = 732

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3 SETSRT 8
         SETSRT
Sbjct: 2 SETSRT 7
>XP_006712956
          Length = 1240

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 914 ETSRTV 919

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1016 ETSRTV 1021

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1118 ETSRTV 1123
>XP_006712955
          Length = 1240

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 914 ETSRTV 919

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1016 ETSRTV 1021

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1118 ETSRTV 1123
>XP_006712954
          Length = 1240

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 914 ETSRTV 919

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1016 ETSRTV 1021

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1118 ETSRTV 1123
>XP_006712953
          Length = 1402

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 914 ETSRTV 919

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1016 ETSRTV 1021

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1118 ETSRTV 1123

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1220 ETSRTV 1225
>XP_006712952
          Length = 1524

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 914 ETSRTV 919

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1016 ETSRTV 1021

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1118 ETSRTV 1123

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1220 ETSRTV 1225
>XP_006712951
          Length = 2119

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 914 ETSRTV 919

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1016 ETSRTV 1021

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1118 ETSRTV 1123

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    ETSRTV 9
            ETSRTV
Sbjct: 1220 ETSRTV 1225
>XP_006710200
          Length = 1119

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 835 ETSRTV 840

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 937 ETSRTV 942
>XP_006710199
          Length = 1241

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 835 ETSRTV 840

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 937 ETSRTV 942
>XP_006710198
          Length = 1314

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 835 ETSRTV 840

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 937 ETSRTV 942
>XP_006710197
          Length = 1836

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 835 ETSRTV 840

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   ETSRTV 9
           ETSRTV
Sbjct: 937 ETSRTV 942
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.295    0.100    0.222 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 349,556
Number of extensions: 483
Number of successful extensions: 71
Number of sequences better than 10000.0: 35
Number of HSP's gapped: 71
Number of HSP's successfully gapped: 71
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.2 bits)
S2: 28 (15.4 bits)

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