Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 20 390 NP_858045 20 390 NP_006525 20 390 NP_001167559 20 390 NP_671766 18 1482 NP_671756 18 1482 NP_003734 18 1482 XP_006712189 18 1482 XP_005264685 18 1482 XP_005264684 18 1482 XP_005264683 18 1482 XP_005264682 18 1482 NP_115495 17 2528 NP_006531 17 2528 XP_005251190 17 2528 XP_005251188 17 2528 XP_005251189 17 2528 XP_005251187 17 2528 XP_005251186 17 2528 XP_005251185 17 2528 NP_001122107 17 3301 NP_001122105 17 3301 NP_056487 17 3301 NP_001155088 17 4312 NP_001030300 17 4312 NP_757386 16 7355 NP_114108 16 7355 NP_000414 16 7355 NP_001257711 16 7355 NP_003192 16 7355 NP_787028 16 7355 NP_219485 16 7355 NP_001011699 16 7355 NP_001258436 16 7355 XP_005260211 16 7355 NP_778253 15 9605 NP_055336 15 9605 XP_005268910 15 9605>NP_001167558 Length = 1423 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MIAQRSREL 9 M+AQRSREL Sbjct: 1224 MVAQRSREL 1232>NP_858045 Length = 1424 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MIAQRSREL 9 M+AQRSREL Sbjct: 1225 MVAQRSREL 1233>NP_006525 Length = 1420 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MIAQRSREL 9 M+AQRSREL Sbjct: 1221 MVAQRSREL 1229>NP_001167559 Length = 1415 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MIAQRSREL 9 M+AQRSREL Sbjct: 1216 MVAQRSREL 1224>NP_671766 Length = 1440 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR REL Sbjct: 1108 MLAQRQREL 1116>NP_671756 Length = 1399 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR REL Sbjct: 1108 MLAQRQREL 1116>NP_003734 Length = 1441 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR REL Sbjct: 1108 MLAQRQREL 1116>XP_006712189 Length = 1394 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR REL Sbjct: 1061 MLAQRQREL 1069>XP_005264685 Length = 1399 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR REL Sbjct: 1108 MLAQRQREL 1116>XP_005264684 Length = 1399 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR REL Sbjct: 1108 MLAQRQREL 1116>XP_005264683 Length = 1440 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR REL Sbjct: 1108 MLAQRQREL 1116>XP_005264682 Length = 1441 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR REL Sbjct: 1108 MLAQRQREL 1116>NP_115495 Length = 6306 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 MIAQRSRE 8 ++AQRSRE Sbjct: 2980 LVAQRSRE 2987>NP_006531 Length = 1464 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR RE+ Sbjct: 1234 MLAQRQREI 1242>XP_005251190 Length = 1395 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR RE+ Sbjct: 1165 MLAQRQREI 1173>XP_005251188 Length = 1464 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR RE+ Sbjct: 1234 MLAQRQREI 1242>XP_005251189 Length = 1464 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR RE+ Sbjct: 1234 MLAQRQREI 1242>XP_005251187 Length = 1464 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR RE+ Sbjct: 1234 MLAQRQREI 1242>XP_005251186 Length = 1464 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR RE+ Sbjct: 1234 MLAQRQREI 1242>XP_005251185 Length = 1464 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 M+AQR RE+ Sbjct: 1234 MLAQRQREI 1242>NP_001122107 Length = 1639 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AQRSREL 9 AQRSREL Sbjct: 82 AQRSREL 88>NP_001122105 Length = 1639 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AQRSREL 9 AQRSREL Sbjct: 82 AQRSREL 88>NP_056487 Length = 1639 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 AQRSREL 9 AQRSREL Sbjct: 82 AQRSREL 88>NP_001155088 Length = 716 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IAQRSREL 9 IAQR REL Sbjct: 330 IAQRCREL 337>NP_001030300 Length = 710 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IAQRSREL 9 IAQR REL Sbjct: 330 IAQRCREL 337>NP_757386 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 +IAQ+ RE+ Sbjct: 38 LIAQKKREI 46>NP_114108 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IAQRSRE 8 IAQRS+E Sbjct: 157 IAQRSKE 163>NP_000414 Length = 639 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IAQRSRE 8 IAQRS+E Sbjct: 359 IAQRSKE 365>NP_001257711 Length = 214 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IAQRSREL 9 IAQR REL Sbjct: 84 IAQRWREL 91>NP_003192 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IAQRSREL 9 IAQR REL Sbjct: 84 IAQRWREL 91>NP_787028 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MIAQRSR 7 +IAQRSR Sbjct: 324 LIAQRSR 330>NP_219485 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 +++QR REL Sbjct: 200 LLSQRKREL 208>NP_001011699 Length = 409 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 +++QR REL Sbjct: 199 LLSQRKREL 207>NP_001258436 Length = 707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 ++ QR+REL Sbjct: 548 LVEQRTREL 556>XP_005260211 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MIAQRSREL 9 +++QR REL Sbjct: 55 LLSQRKREL 63>NP_778253 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MIAQRSRE 8 +IAQRS++ Sbjct: 344 LIAQRSKD 351>NP_055336 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IAQRSREL 9 +AQR REL Sbjct: 853 VAQRWREL 860>XP_005268910 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MIAQRSRE 8 +IAQRS++ Sbjct: 111 LIAQRSKD 118Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.130 0.306 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 386,938 Number of extensions: 612 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |