Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 299 XP_006718908 20 299 XP_005271621 20 299 XP_006718907 20 299 XP_006718906 20 299 XP_005271619 20 299 XP_005271618 20 299 NP_001175 20 509 NP_055907 18 1135 XP_005255242 18 1135 XP_005255241 18 1135 XP_005255240 18 1135 XP_005255239 18 1135 NP_808881 17 2528 NP_060224 17 4312 XP_005249256 17 4312 XP_006715189 17 4312 XP_006715188 17 4312 NP_000060 16 5631 NP_620165 16 5631 NP_001265662 16 5631 NP_473455 16 5631 NP_004299 16 5631 XP_005245535 16 5631 NP_055031 16 7355 NP_004247 16 7355 NP_001136065 16 7355 NP_001136066 16 7355 NP_000284 15 9605 NP_001027005 15 9605 NP_150285 15 9605 NP_001139114 15 9605 NP_055502 15 9605 NP_060898 15 9605 NP_001004127 15 9605 NP_001265546 15 9605 NP_001265545 15 9605 NP_060516 15 9605 NP_004327 15 9605 NP_006728 15 9605 NP_001229796 15 9605 NP_056028 15 9605 NP_065770 15 9605 NP_001230183 15 9605 NP_057321 15 9605 NP_851851 15 9605 NP_001185655 15 9605 XP_005256041 15 9605 XP_005256040 15 9605 XP_006719512 15 9605 XP_005253957 15 9605 XP_006718232 15 9605 XP_005252889 15 9605 XP_006713894 15 9605 XP_006713893 15 9605 XP_006713892 15 9605 XP_005269431 15 9605 XP_006713891 15 9605 XP_006713890 15 9605 NP_060906 15 9605 NP_851852 15 9605 NP_001017526 15 9605 NP_001131031 15 9605 NP_004505 15 9605>NP_000042 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GVEGVFRR 9 GVEGVFRR Sbjct: 2922 GVEGVFRR 2929>XP_006718908 Length = 1708 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GVEGVFRR 9 GVEGVFRR Sbjct: 1574 GVEGVFRR 1581>XP_005271621 Length = 2708 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GVEGVFRR 9 GVEGVFRR Sbjct: 2574 GVEGVFRR 2581>XP_006718907 Length = 3050 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GVEGVFRR 9 GVEGVFRR Sbjct: 2916 GVEGVFRR 2923>XP_006718906 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GVEGVFRR 9 GVEGVFRR Sbjct: 2922 GVEGVFRR 2929>XP_005271619 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GVEGVFRR 9 GVEGVFRR Sbjct: 2922 GVEGVFRR 2929>XP_005271618 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GVEGVFRR 9 GVEGVFRR Sbjct: 2922 GVEGVFRR 2929>NP_001175 Length = 2644 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MGVEGVFRR 9 MG EG+FRR Sbjct: 2526 MGTEGLFRR 2534>NP_055907 Length = 3661 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GVEGVFR 8 GVEGVFR Sbjct: 2387 GVEGVFR 2393>XP_005255242 Length = 3609 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GVEGVFR 8 GVEGVFR Sbjct: 2335 GVEGVFR 2341>XP_005255241 Length = 3637 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GVEGVFR 8 GVEGVFR Sbjct: 2363 GVEGVFR 2369>XP_005255240 Length = 3663 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GVEGVFR 8 GVEGVFR Sbjct: 2389 GVEGVFR 2395>XP_005255239 Length = 3689 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GVEGVFR 8 GVEGVFR Sbjct: 2415 GVEGVFR 2421>NP_808881 Length = 609 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GVEGVFR 8 G+EGVFR Sbjct: 369 GLEGVFR 375>NP_060224 Length = 1440 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MGVEGVFRR 9 +GV+ +FRR Sbjct: 420 LGVDSLFRR 428>XP_005249256 Length = 1054 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MGVEGVFRR 9 +GV+ +FRR Sbjct: 34 LGVDSLFRR 42>XP_006715189 Length = 1240 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MGVEGVFRR 9 +GV+ +FRR Sbjct: 420 LGVDSLFRR 428>XP_006715188 Length = 1400 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MGVEGVFRR 9 +GV+ +FRR Sbjct: 420 LGVDSLFRR 428>NP_000060 Length = 1873 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 1595 EGIFRR 1600>NP_620165 Length = 266 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 119 EGIFRR 124>NP_001265662 Length = 668 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 56 EGIFRR 61>NP_473455 Length = 731 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 119 EGIFRR 124>NP_004299 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 278 EGIFRR 283>XP_005245535 Length = 1854 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 1576 EGIFRR 1581>NP_055031 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VEGVFRR 9 +EGVF R Sbjct: 250 IEGVFER 256>NP_004247 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MGVEGVFRR 9 MG+ G+F R Sbjct: 453 MGLVGIFSR 461>NP_001136065 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VEGVFRR 9 +EGVF R Sbjct: 250 IEGVFER 256>NP_001136066 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VEGVFRR 9 +EGVF R Sbjct: 250 IEGVFER 256>NP_000284 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGVEGVFR 8 M ++GVFR Sbjct: 372 MMIDGVFR 379>NP_001027005 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGVEGVFR 8 M ++GVFR Sbjct: 365 MMIDGVFR 372>NP_150285 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 +GVFRR Sbjct: 206 DGVFRR 211>NP_001139114 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 417 EGMFRR 422>NP_055502 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 462 EGMFRR 467>NP_060898 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VEGVFRR 9 V+GVF+R Sbjct: 92 VQGVFQR 98>NP_001004127 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VEGVFRR 9 +EG FRR Sbjct: 113 LEGAFRR 119>NP_001265546 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 959 EGLFRR 964>NP_001265545 Length = 1065 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 996 EGLFRR 1001>NP_060516 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MGVEGVFRR 9 +G EG F+R Sbjct: 598 VGSEGTFQR 606>NP_004327 Length = 1085 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 1016 EGLFRR 1021>NP_006728 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVEGVF 7 G+EGVF Sbjct: 450 GLEGVF 455>NP_001229796 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVEGVF 7 G+EGVF Sbjct: 433 GLEGVF 438>NP_056028 Length = 1287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGVEGVFR 8 +GVE VF+ Sbjct: 293 LGVENVFQ 300>NP_065770 Length = 2036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GVEGVFR 8 G EG+FR Sbjct: 1569 GGEGIFR 1575>NP_001230183 Length = 1241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGVEGVFR 8 +GVE VF+ Sbjct: 293 LGVENVFQ 300>NP_057321 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VEGVFRR 9 +EGV+R+ Sbjct: 541 IEGVYRK 547>NP_851851 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 350 EGLFRR 355>NP_001185655 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 228 EGLFRR 233>XP_005256041 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGVEGVFR 8 M ++GVFR Sbjct: 365 MMIDGVFR 372>XP_005256040 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGVEGVFR 8 M ++GVFR Sbjct: 372 MMIDGVFR 379>XP_006719512 Length = 357 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VEGVFRR 9 +EGV+R+ Sbjct: 143 IEGVYRK 149>XP_005253957 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VEGVFRR 9 +EGV+R+ Sbjct: 528 IEGVYRK 534>XP_006718232 Length = 1263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGVEGVFR 8 +GVE VF+ Sbjct: 269 LGVENVFQ 276>XP_005252889 Length = 1307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGVEGVFR 8 +GVE VF+ Sbjct: 293 LGVENVFQ 300>XP_006713894 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 310 EGMFRR 315>XP_006713893 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 310 EGMFRR 315>XP_006713892 Length = 952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 417 EGMFRR 422>XP_005269431 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 477 EGMFRR 482>XP_006713891 Length = 997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 462 EGMFRR 467>XP_006713890 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 477 EGMFRR 482>NP_060906 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MGVEGVFR 8 +G++GV R Sbjct: 66 LGIQGVIR 73>NP_851852 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 228 EGLFRR 233>NP_001017526 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EGVFRR 9 EG+FRR Sbjct: 259 EGLFRR 264>NP_001131031 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VEGVFRR 9 +EGV+R+ Sbjct: 429 IEGVYRK 435>NP_004505 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VEGVFRR 9 V+GVF+R Sbjct: 123 VDGVFQR 129Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.155 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 513,374 Number of extensions: 1050 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |