Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000360 20 509 XP_005268094 20 509 NP_000224 18 1135 XP_005264366 18 1135 XP_006712078 18 1135 NP_001167569 17 3301 NP_060814 17 3301 XP_006717973 17 3301 NP_852111 17 4312 NP_000136 17 4312 NP_065394 16 5631 NP_001159450 16 5631 NP_653308 16 5631 NP_001159449 16 5631 NP_001007254 16 5631 XP_005263937 16 5631 XP_005263936 16 5631 NP_443099 16 7355 XP_006721172 16 7355 XP_006720008 16 7355 XP_006720007 16 7355 XP_006720006 16 7355 NP_055660 15 9605 NP_000912 15 9605 NP_001240658 15 9605 NP_001240657 15 9605 NP_001240656 15 9605 NP_001240659 15 9605 NP_001240662 15 9605 NP_001240661 15 9605 NP_067647 15 9605 NP_002502 15 9605 NP_001245213 15 9605 XP_006720535 15 9605 XP_005254948 15 9605 XP_005254946 15 9605 XP_006719149 15 9605 NP_001138516 15 9605 NP_037404 15 9605 NP_001004452 15 9605>NP_000360 Length = 764 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 MGMYLLLI 8 MGMYLLLI Sbjct: 463 MGMYLLLI 470>XP_005268094 Length = 764 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 MGMYLLLI 8 MGMYLLLI Sbjct: 463 MGMYLLLI 470>NP_000224 Length = 699 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 MGMYLLLI 8 MG+YLLLI Sbjct: 408 MGLYLLLI 415>XP_005264366 Length = 380 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 MGMYLLLI 8 MG+YLLLI Sbjct: 89 MGLYLLLI 96>XP_006712078 Length = 389 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 MGMYLLLI 8 MG+YLLLI Sbjct: 98 MGLYLLLI 105>NP_001167569 Length = 258 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MGMYLLL 7 MG+YLLL Sbjct: 245 MGLYLLL 251>NP_060814 Length = 475 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MGMYLLL 7 MG+YLLL Sbjct: 245 MGLYLLL 251>XP_006717973 Length = 397 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MGMYLLL 7 MG+YLLL Sbjct: 167 MGLYLLL 173>NP_852111 Length = 669 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 MGMYLLLI 8 +G+YLLLI Sbjct: 385 IGIYLLLI 392>NP_000136 Length = 695 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 MGMYLLLI 8 +G+YLLLI Sbjct: 411 IGIYLLLI 418>NP_065394 Length = 580 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMYLLLIT 9 G Y+LL+T Sbjct: 353 GWYILLVT 360>NP_001159450 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GMYLLLI 8 G+YLLL+ Sbjct: 114 GLYLLLV 120>NP_653308 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GMYLLLI 8 G+YLLL+ Sbjct: 114 GLYLLLV 120>NP_001159449 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GMYLLLI 8 G+YLLL+ Sbjct: 114 GLYLLLV 120>NP_001007254 Length = 604 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MGMYLLLIT 9 +GM +LLIT Sbjct: 2 LGMNMLLIT 10>XP_005263937 Length = 758 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GMYLLLI 8 G+YLLL+ Sbjct: 38 GLYLLLV 44>XP_005263936 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GMYLLLI 8 G+YLLL+ Sbjct: 114 GLYLLLV 120>NP_443099 Length = 1738 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MGMYLLLI 8 +GM+LLL+ Sbjct: 1340 VGMFLLLL 1347>XP_006721172 Length = 139 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MGMYLLLI 8 +G+YLLL+ Sbjct: 32 VGIYLLLL 39>XP_006720008 Length = 1645 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MGMYLLLI 8 +GM+LLL+ Sbjct: 1247 VGMFLLLL 1254>XP_006720007 Length = 1709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MGMYLLLI 8 +GM+LLL+ Sbjct: 1311 VGMFLLLL 1318>XP_006720006 Length = 1713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MGMYLLLI 8 +GM+LLL+ Sbjct: 1315 VGMFLLLL 1322>NP_055660 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMYLLLIT 9 G Y++LIT Sbjct: 104 GYYIVLIT 111>NP_000912 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MGMYLL 6 MG+YLL Sbjct: 146 MGLYLL 151>NP_001240658 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGMYLLLI 8 MG+YL +I Sbjct: 406 MGIYLFVI 413>NP_001240657 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGMYLLLI 8 MG+YL +I Sbjct: 421 MGIYLFVI 428>NP_001240656 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGMYLLLI 8 MG+YL +I Sbjct: 481 MGIYLFVI 488>NP_001240659 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGMYLLLI 8 MG+YL +I Sbjct: 323 MGIYLFVI 330>NP_001240662 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGMYLLLI 8 MG+YL +I Sbjct: 298 MGIYLFVI 305>NP_001240661 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGMYLLLI 8 MG+YL +I Sbjct: 322 MGIYLFVI 329>NP_067647 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MGMYLLLI 8 MG+YL +I Sbjct: 454 MGIYLFVI 461>NP_002502 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MYLLLIT 9 +YLL+IT Sbjct: 49 LYLLIIT 55>NP_001245213 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MYLLLIT 9 MY+L+IT Sbjct: 139 MYVLMIT 145>XP_006720535 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MYLLLI 8 MYLLLI Sbjct: 176 MYLLLI 181>XP_005254948 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MYLLLI 8 MYLLLI Sbjct: 61 MYLLLI 66>XP_005254946 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MYLLLI 8 MYLLLI Sbjct: 176 MYLLLI 181>XP_006719149 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MGMYLL 6 MG+YLL Sbjct: 146 MGLYLL 151>NP_001138516 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MYLLLI 8 MYLLLI Sbjct: 176 MYLLLI 181>NP_037404 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MYLLLI 8 MYLLLI Sbjct: 176 MYLLLI 181>NP_001004452 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MGMYLLLI 8 +GMYL+ + Sbjct: 32 LGMYLITV 39Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.158 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 394,860 Number of extensions: 707 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |