Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_001091982 17 4312 NP_006249 17 4312 NP_631906 17 4312 XP_005270028 17 4312 XP_005270027 17 4312 XP_006716350 17 4312 NP_733751 16 5631 XP_006716142 16 5631 XP_005250088 16 5631 XP_006716141 16 5631 XP_005250085 16 5631 XP_006716140 16 5631 XP_005250084 16 5631 XP_005250083 16 5631 XP_005250082 16 5631 NP_031374 16 7355 NP_001248385 16 7355 NP_002339 16 7355 NP_001028839 16 7355 NP_001248386 16 7355 XP_006711388 16 7355 XP_006711387 16 7355 XP_006711386 16 7355 XP_006711385 16 7355 XP_006711384 16 7355 XP_006711383 16 7355 XP_005245221 16 7355 XP_006711288 16 7355 XP_006711287 16 7355 NP_001036064 15 9605 NP_005226 15 9605 NP_001157666 15 9605 NP_000120 15 9605 NP_001157661 15 9605 NP_005808 15 9605 NP_001243839 15 9605 NP_001171761 15 9605 NP_001798 15 9605 NP_000329 15 9605 NP_006626 15 9605 NP_938408 15 9605 NP_057050 15 9605 NP_004719 15 9605 XP_006723868 15 9605 XP_006723867 15 9605 XP_005259360 15 9605 XP_006723039 15 9605 XP_006720719 15 9605 XP_005254663 15 9605 XP_005254662 15 9605 XP_006715073 15 9605 XP_005246434 15 9605 XP_005246433 15 9605 XP_005246432 15 9605 XP_006712427 15 9605 NP_001123483 15 9605 NP_113639 15 9605 NP_001032239 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MGKLEVTKR 9 M KLEVTKR Sbjct: 942 MEKLEVTKR 950>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MGKLEVTKR 9 M KLEVTKR Sbjct: 942 MEKLEVTKR 950>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MGKLEVTKR 9 M KLEVTKR Sbjct: 942 MEKLEVTKR 950>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MGKLEVTKR 9 M KLEVTKR Sbjct: 942 MEKLEVTKR 950>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MGKLEVTKR 9 M KLEVTKR Sbjct: 942 MEKLEVTKR 950>NP_001091982 Length = 671 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GKLEVTK 8 GK+EVTK Sbjct: 146 GKVEVTK 152>NP_006249 Length = 686 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GKLEVTK 8 GK+EVTK Sbjct: 161 GKVEVTK 167>NP_631906 Length = 312 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 MG L VTK+ Sbjct: 81 MGNLRVTKK 89>XP_005270028 Length = 591 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GKLEVTK 8 GK+EVTK Sbjct: 66 GKVEVTK 72>XP_005270027 Length = 665 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GKLEVTK 8 GK+EVTK Sbjct: 161 GKVEVTK 167>XP_006716350 Length = 191 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 MG L VTK+ Sbjct: 1 MGNLRVTKK 9>NP_733751 Length = 4911 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 MGK +TKR Sbjct: 825 MGKPAITKR 833>XP_006716142 Length = 4927 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 MGK +TKR Sbjct: 826 MGKPAITKR 834>XP_005250088 Length = 4928 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 MGK +TKR Sbjct: 826 MGKPAITKR 834>XP_006716141 Length = 4959 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 MGK +TKR Sbjct: 826 MGKPAITKR 834>XP_005250085 Length = 4979 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 MGK +TKR Sbjct: 826 MGKPAITKR 834>XP_006716140 Length = 4982 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 MGK +TKR Sbjct: 826 MGKPAITKR 834>XP_005250084 Length = 4982 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 MGK +TKR Sbjct: 826 MGKPAITKR 834>XP_005250083 Length = 4982 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 MGK +TKR Sbjct: 825 MGKPAITKR 833>XP_005250082 Length = 4983 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 MGK +TKR Sbjct: 826 MGKPAITKR 834>NP_031374 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GKLEVTK 8 GKL VTK Sbjct: 284 GKLSVTK 290>NP_001248385 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MGKLEVTK 8 +G+L++TK Sbjct: 104 LGRLDITK 111>NP_002339 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MGKLEVTK 8 +G+L++TK Sbjct: 104 LGRLDITK 111>NP_001028839 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MGKLEVTK 8 +G+L++TK Sbjct: 104 LGRLDITK 111>NP_001248386 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MGKLEVTK 8 +G+L++TK Sbjct: 104 LGRLDITK 111>XP_006711388 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MGKLEVTK 8 +G+L++TK Sbjct: 104 LGRLDITK 111>XP_006711387 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MGKLEVTK 8 +G+L++TK Sbjct: 104 LGRLDITK 111>XP_006711386 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MGKLEVTK 8 +G+L++TK Sbjct: 104 LGRLDITK 111>XP_006711385 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MGKLEVTK 8 +G+L++TK Sbjct: 104 LGRLDITK 111>XP_006711384 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MGKLEVTK 8 +G+L++TK Sbjct: 104 LGRLDITK 111>XP_006711383 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MGKLEVTK 8 +G+L++TK Sbjct: 104 LGRLDITK 111>XP_005245221 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MGKLEVTK 8 +G+L++TK Sbjct: 104 LGRLDITK 111>XP_006711288 Length = 604 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GKLEVTK 8 GKL VTK Sbjct: 218 GKLSVTK 224>XP_006711287 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GKLEVTK 8 GKL VTK Sbjct: 284 GKLSVTK 290>NP_001036064 Length = 1292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MGKLEVT 7 MG LE+T Sbjct: 60 MGNLEIT 66>NP_005226 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MGKLEVT 7 MG LE+T Sbjct: 60 MGNLEIT 66>NP_001157666 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 +GKL TK+ Sbjct: 243 LGKLRATKQ 251>NP_000120 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MGKLEVTKR 9 +GKL VTK+ Sbjct: 461 IGKLIVTKQ 469>NP_001157661 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 +GKL TK+ Sbjct: 255 LGKLRATKQ 263>NP_005808 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MGKLEVTKR 9 +GKL TK+ Sbjct: 255 LGKLRATKQ 263>NP_001243839 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GKLEVTK 8 GKL++TK Sbjct: 258 GKLDLTK 264>NP_001171761 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GKLEVTK 8 GKL +TK Sbjct: 865 GKLNITK 871>NP_001798 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GKLEVTKR 9 G LE+TK+ Sbjct: 520 GYLEITKK 527>NP_000329 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GKLEVTK 8 GKL +TK Sbjct: 865 GKLNITK 871>NP_006626 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GKLEVTKR 9 G+L+VT+R Sbjct: 28 GQLDVTQR 35>NP_938408 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MGKLEVT 7 +GK+EVT Sbjct: 124 LGKVEVT 130>NP_057050 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MGKLEVT 7 +GK+EVT Sbjct: 124 LGKVEVT 130>NP_004719 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GKLEVTK 8 GKL++TK Sbjct: 326 GKLDLTK 332>XP_006723868 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MGKLEVT 7 +GK+EVT Sbjct: 124 LGKVEVT 130>XP_006723867 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MGKLEVT 7 +GK+EVT Sbjct: 124 LGKVEVT 130>XP_005259360 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GKLEVT 7 GKLE+T Sbjct: 199 GKLEIT 204>XP_006723039 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GKLEVTKR 9 G+L+VT+R Sbjct: 28 GQLDVTQR 35>XP_006720719 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GKLEVTK 8 GKL +TK Sbjct: 897 GKLNITK 903>XP_005254663 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GKLEVTK 8 GKL +TK Sbjct: 865 GKLNITK 871>XP_005254662 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GKLEVTK 8 GKL +TK Sbjct: 897 GKLNITK 903>XP_006715073 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MGKLEVTKR 9 +GKL VTK+ Sbjct: 461 IGKLIVTKQ 469>XP_005246434 Length = 1282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MGKLEVT 7 MG LE+T Sbjct: 60 MGNLEIT 66>XP_005246433 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MGKLEVT 7 MG LE+T Sbjct: 60 MGNLEIT 66>XP_005246432 Length = 1307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MGKLEVT 7 MG LE+T Sbjct: 60 MGNLEIT 66>XP_006712427 Length = 1323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MGKLEVT 7 MG LE+T Sbjct: 60 MGNLEIT 66>NP_001123483 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GKLEVT 7 GKLE+T Sbjct: 167 GKLEIT 172>NP_113639 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GKLEVT 7 GKLE+T Sbjct: 185 GKLEIT 190>NP_001032239 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MGKLEVTK 8 +GK+++TK Sbjct: 65 LGKVKITK 72Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.132 0.336 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 420,642 Number of extensions: 635 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |