Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 665 NP_671714 19 665 XP_006715890 19 665 XP_005250160 19 665 XP_005250159 19 665 NP_004963 17 4312 XP_005251512 17 4312 NP_878269 16 5631 NP_878272 16 5631 NP_067001 16 5631 XP_006721506 16 5631 XP_005256500 16 5631 XP_006721505 16 5631 XP_006721504 16 5631 NP_998762 16 5631 NP_001273913 16 7355 NP_001107867 16 7355 NP_060208 16 7355 XP_005251549 16 7355 NP_078963 15 9605 NP_004384 15 9605 NP_001171110 15 9605 NP_001171113 15 9605 NP_001171114 15 9605 NP_001159400 15 9605 NP_001171111 15 9605 NP_001171112 15 9605 NP_001171115 15 9605 NP_001171107 15 9605 NP_001171105 15 9605 NP_001171106 15 9605 NP_001171109 15 9605 NP_001171108 15 9605 NP_001186131 15 9605 NP_006218 15 9605 NP_872617 15 9605 NP_001186130 15 9605 NP_001229849 15 9605 NP_001229850 15 9605 XP_005260496 15 9605 XP_006713811 15 9605 XP_006713810 15 9605 XP_005247834 15 9605>NP_005742 Length = 3907 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MEVELSSMK 9 M+VELSSMK Sbjct: 3136 MQVELSSMK 3144>NP_671714 Length = 3899 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MEVELSSMK 9 M+VELSSMK Sbjct: 3128 MQVELSSMK 3136>XP_006715890 Length = 3860 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MEVELSSMK 9 M+VELSSMK Sbjct: 3089 MQVELSSMK 3097>XP_005250160 Length = 3939 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MEVELSSMK 9 M+VELSSMK Sbjct: 3168 MQVELSSMK 3176>XP_005250159 Length = 3952 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MEVELSSMK 9 M+VELSSMK Sbjct: 3181 MQVELSSMK 3189>NP_004963 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MEVELSSMK 9 +E+ELSS++ Sbjct: 352 LEIELSSLR 360>XP_005251512 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MEVELSSMK 9 +E+ELSS++ Sbjct: 352 LEIELSSLR 360>NP_878269 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EVELSSMK 9 +VEL+SMK Sbjct: 133 DVELTSMK 140>NP_878272 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EVELSSMK 9 +VEL+SMK Sbjct: 133 DVELTSMK 140>NP_067001 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EVELSSMK 9 +VEL+SMK Sbjct: 133 DVELTSMK 140>XP_006721506 Length = 410 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MEVELSSMK 9 ME+E+S+M+ Sbjct: 19 MEMEISNMR 27>XP_005256500 Length = 458 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MEVELSSMK 9 ME+E+S+M+ Sbjct: 67 MEMEISNMR 75>XP_006721505 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MEVELSSMK 9 ME+E+S+M+ Sbjct: 101 MEMEISNMR 109>XP_006721504 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MEVELSSMK 9 ME+E+S+M+ Sbjct: 101 MEMEISNMR 109>NP_998762 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MEVELSSMK 9 ME+E+S+M+ Sbjct: 101 MEMEISNMR 109>NP_001273913 Length = 203 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MEVELSSMK 9 +E ELSS+K Sbjct: 105 LEEELSSLK 113>NP_001107867 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MEVELSSMK 9 +E ELSS+K Sbjct: 105 LEEELSSLK 113>NP_060208 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MEVELSSMK 9 +E ELSS+K Sbjct: 105 LEEELSSLK 113>XP_005251549 Length = 1405 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MEVELSSMK 9 +E ELSS+K Sbjct: 105 LEEELSSLK 113>NP_078963 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EVELSSMK 9 EVE+++MK Sbjct: 229 EVEITTMK 236>NP_004384 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVELSSMK 9 EVEL +MK Sbjct: 219 EVELHNMK 226>NP_001171110 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVELSSMK 9 EVEL +MK Sbjct: 219 EVELHNMK 226>NP_001171113 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVELSSMK 9 EVEL +MK Sbjct: 219 EVELHNMK 226>NP_001171114 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVELSSMK 9 EVEL +MK Sbjct: 219 EVELHNMK 226>NP_001159400 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVELSSMK 9 EVEL +MK Sbjct: 219 EVELHNMK 226>NP_001171111 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVELSSMK 9 EVEL +MK Sbjct: 219 EVELHNMK 226>NP_001171112 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVELSSMK 9 EVEL +MK Sbjct: 219 EVELHNMK 226>NP_001171115 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVELSSMK 9 EVEL +MK Sbjct: 219 EVELHNMK 226>NP_001171107 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVELSSMK 9 EVEL +MK Sbjct: 219 EVELHNMK 226>NP_001171105 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVELSSMK 9 EVEL +MK Sbjct: 219 EVELHNMK 226>NP_001171106 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVELSSMK 9 EVEL +MK Sbjct: 219 EVELHNMK 226>NP_001171109 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVELSSMK 9 EVEL +MK Sbjct: 219 EVELHNMK 226>NP_001171108 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVELSSMK 9 EVEL +MK Sbjct: 219 EVELHNMK 226>NP_001186131 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EVELSSMK 9 EVE+++MK Sbjct: 200 EVEITTMK 207>NP_006218 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EVELSSM 8 EV+LSSM Sbjct: 361 EVQLSSM 367>NP_872617 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EVELSSM 8 EV+LSSM Sbjct: 309 EVQLSSM 315>NP_001186130 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EVELSSMK 9 EVE+++MK Sbjct: 229 EVEITTMK 236>NP_001229849 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EVELSSM 8 EV+LSSM Sbjct: 266 EVQLSSM 272>NP_001229850 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EVELSSM 8 EV+LSSM Sbjct: 273 EVQLSSM 279>XP_005260496 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EVELSSM 8 EV+LSSM Sbjct: 381 EVQLSSM 387>XP_006713811 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EVELSSMK 9 EVE+++MK Sbjct: 229 EVEITTMK 236>XP_006713810 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EVELSSMK 9 EVE+++MK Sbjct: 229 EVEITTMK 236>XP_005247834 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EVELSSMK 9 EVE+++MK Sbjct: 229 EVEITTMK 236Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.111 0.237 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 308,516 Number of extensions: 330 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |