Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 18 1135 NP_653080 18 1135 XP_005267292 18 1135 XP_005267291 18 1135 XP_005267290 18 1135 NP_001229854 17 3301 NP_055673 17 3301 XP_005245747 17 3301 XP_005245746 17 3301 XP_005245743 17 3301 XP_005245742 17 3301 XP_006711757 17 3301 XP_005245741 17 3301 NP_060003 17 4312 XP_005256707 17 4312 NP_060004 16 5631 NP_002463 16 5631 NP_056083 16 5631 NP_001093582 16 5631 NP_037375 16 5631 XP_005247302 16 5631 NP_001020272 16 7355 NP_001020252 16 7355 NP_001020261 16 7355 NP_002376 16 7355 NP_001020263 16 7355 NP_001020271 16 7355 NP_060959 16 7355 XP_005266756 16 7355 XP_005245393 16 7355 XP_006711515 16 7355 XP_006711514 16 7355 XP_006711513 16 7355 NP_001165124 15 9605 NP_055610 15 9605 NP_116165 15 9605 NP_001269877 15 9605 NP_001106970 15 9605 NP_878250 15 9605 XP_006720131 15 9605 XP_005269685 15 9605 XP_005269684 15 9605 XP_005269683 15 9605 XP_005269681 15 9605 XP_006717770 15 9605 XP_005269679 15 9605 XP_006712945 15 9605 XP_006712944 15 9605>NP_005091 Length = 1782 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MATKSAVDH 9 MATKSAV H Sbjct: 124 MATKSAVVH 132>NP_653080 Length = 1684 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MATKSAVDH 9 MATKSAV H Sbjct: 26 MATKSAVVH 34>XP_005267292 Length = 1677 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MATKSAVDH 9 MATKSAV H Sbjct: 19 MATKSAVVH 27>XP_005267291 Length = 1684 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MATKSAVDH 9 MATKSAV H Sbjct: 26 MATKSAVVH 34>XP_005267290 Length = 1782 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MATKSAVDH 9 MATKSAV H Sbjct: 124 MATKSAVVH 132>NP_001229854 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKSAVDH 9 TK+A+DH Sbjct: 207 TKAAIDH 213>NP_055673 Length = 709 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKSAVDH 9 TK+A+DH Sbjct: 285 TKAAIDH 291>XP_005245747 Length = 469 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKSAVDH 9 TK+A+DH Sbjct: 45 TKAAIDH 51>XP_005245746 Length = 474 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKSAVDH 9 TK+A+DH Sbjct: 50 TKAAIDH 56>XP_005245743 Length = 618 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKSAVDH 9 TK+A+DH Sbjct: 285 TKAAIDH 291>XP_005245742 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKSAVDH 9 TK+A+DH Sbjct: 207 TKAAIDH 213>XP_006711757 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKSAVDH 9 TK+A+DH Sbjct: 207 TKAAIDH 213>XP_005245741 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKSAVDH 9 TK+A+DH Sbjct: 207 TKAAIDH 213>NP_060003 Length = 1939 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 MATKSAVD 8 MAT SAVD Sbjct: 333 MATDSAVD 340>XP_005256707 Length = 1940 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 MATKSAVD 8 MAT SAVD Sbjct: 333 MATDSAVD 340>NP_060004 Length = 1941 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MATKSAVD 8 MAT SA+D Sbjct: 333 MATDSAID 340>NP_002463 Length = 1937 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MATKSAVD 8 MAT SA+D Sbjct: 333 MATDSAID 340>NP_056083 Length = 2243 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KSAVDH 9 KSA+DH Sbjct: 192 KSAIDH 197>NP_001093582 Length = 1941 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MATKSAVD 8 MAT SA+D Sbjct: 333 MATDSAID 340>NP_037375 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ATKSAVDH 9 +TKS +DH Sbjct: 122 STKSGLDH 129>XP_005247302 Length = 2248 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KSAVDH 9 KSA+DH Sbjct: 192 KSAIDH 197>NP_001020272 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MATKSAVDH 9 +AT S +DH Sbjct: 149 LATASTMDH 157>NP_001020252 Length = 197 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MATKSAVDH 9 +AT S +DH Sbjct: 16 LATASTMDH 24>NP_001020261 Length = 171 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MATKSAVDH 9 +AT S +DH Sbjct: 16 LATASTMDH 24>NP_002376 Length = 186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MATKSAVDH 9 +AT S +DH Sbjct: 16 LATASTMDH 24>NP_001020263 Length = 160 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MATKSAVDH 9 +AT S +DH Sbjct: 16 LATASTMDH 24>NP_001020271 Length = 197 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MATKSAVDH 9 +AT S +DH Sbjct: 149 LATASTMDH 157>NP_060959 Length = 2964 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MATKSAVDH 9 +ATK +DH Sbjct: 1817 LATKKNLDH 1825>XP_005266756 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MATKSAVDH 9 +AT S +DH Sbjct: 149 LATASTMDH 157>XP_005245393 Length = 2663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MATKSAVDH 9 +ATK +DH Sbjct: 1817 LATKKNLDH 1825>XP_006711515 Length = 2904 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MATKSAVDH 9 +ATK +DH Sbjct: 1817 LATKKNLDH 1825>XP_006711514 Length = 2964 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MATKSAVDH 9 +ATK +DH Sbjct: 1817 LATKKNLDH 1825>XP_006711513 Length = 2964 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MATKSAVDH 9 +ATK +DH Sbjct: 1817 LATKKNLDH 1825>NP_001165124 Length = 1190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ATKSAVDH 9 ATKS +D+ Sbjct: 497 ATKSIIDY 504>NP_055610 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ATKSAVDH 9 ATKS +D+ Sbjct: 521 ATKSIIDY 528>NP_116165 Length = 2540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TKSAVDH 9 TK+ VDH Sbjct: 947 TKTLVDH 953>NP_001269877 Length = 2358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TKSAVDH 9 TK+ VDH Sbjct: 765 TKTLVDH 771>NP_001106970 Length = 956 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MATKSAVD 8 +ATK++VD Sbjct: 924 LATKNSVD 931>NP_878250 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MATKSAVD 8 +ATK++VD Sbjct: 695 LATKNSVD 702>XP_006720131 Length = 957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MATKSAVD 8 +ATK++VD Sbjct: 925 LATKNSVD 932>XP_005269685 Length = 1700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TKSAVDH 9 TK+ VDH Sbjct: 947 TKTLVDH 953>XP_005269684 Length = 2032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TKSAVDH 9 TK+ VDH Sbjct: 947 TKTLVDH 953>XP_005269683 Length = 2252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TKSAVDH 9 TK+ VDH Sbjct: 659 TKTLVDH 665>XP_005269681 Length = 2321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TKSAVDH 9 TK+ VDH Sbjct: 728 TKTLVDH 734>XP_006717770 Length = 2358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TKSAVDH 9 TK+ VDH Sbjct: 765 TKTLVDH 771>XP_005269679 Length = 2502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TKSAVDH 9 TK+ VDH Sbjct: 909 TKTLVDH 915>XP_006712945 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ATKSAVDH 9 ATKS +D+ Sbjct: 521 ATKSIIDY 528>XP_006712944 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ATKSAVDH 9 ATKS +D+ Sbjct: 521 ATKSIIDY 528Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.109 0.288 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 287,127 Number of extensions: 329 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |