Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000224                                                              20     299
NP_852111                                                              20     299
NP_000136                                                              20     299
NP_000360                                                              20     299
XP_005268094                                                           20     299
XP_005264366                                                           20     299
XP_006712078                                                           20     299
NP_001001524                                                           18    1135
XP_005245269                                                           18    1935
XP_006711403                                                           18    1935
NP_653300                                                              18    1935
NP_001001734                                                           18    1935
NP_001171761                                                           17    2528
NP_000329                                                              17    2528
XP_006720719                                                           17    2528
XP_005254663                                                           17    2528
XP_005254662                                                           17    2528
NP_001124468                                                           17    3301
NP_000850                                                              17    3301
NP_001028252                                                           17    3301
NP_055441                                                              17    3301
NP_001186438                                                           17    4312
NP_054768                                                              17    4312
NP_005688                                                              17    4312
NP_001186439                                                           17    4312
XP_006720432                                                           17    4312
NP_004819                                                              17    4312
NP_001029031                                                           16    5631
NP_001257377                                                           16    5631
NP_000009                                                              16    5631
NP_001005283                                                           16    5631
NP_001257376                                                           16    5631
NP_001171313                                                           16    5631
NP_003130                                                              16    5631
NP_001171516                                                           16    5631
NP_001171515                                                           16    5631
NP_079533                                                              16    5631
XP_006721579                                                           16    5631
XP_006710508                                                           16    5631
XP_006710507                                                           16    5631
NP_689910                                                              16    5631
NP_001123530                                                           16    5631
NP_473445                                                              16    7355
NP_066000                                                              16    7355
NP_060542                                                              16    7355
NP_821138                                                              16    7355
NP_112184                                                              16    7355
NP_001171817                                                           16    7355
NP_001008892                                                           16    7355
NP_001008894                                                           16    7355
NP_001008860                                                           16    7355
NP_001171818                                                           16    7355
NP_997213                                                              16    7355
XP_006720431                                                           16    7355
XP_006720430                                                           16    7355
XP_006720429                                                           16    7355
XP_005272610                                                           16    7355
XP_005272609                                                           16    7355
XP_006720428                                                           16    7355
XP_005272606                                                           16    7355
XP_005272605                                                           16    7355
XP_005272607                                                           16    7355
XP_006720427                                                           16    7355
XP_005272604                                                           16    7355
XP_005272603                                                           16    7355
XP_006713781                                                           16    7355
NP_005496                                                              15    9605
NP_005996                                                              15    9605
NP_036566                                                              15    9605
NP_001139325                                                           15    9605
NP_060960                                                              15    9605
NP_001073932                                                           15    9605
NP_001368                                                              15    9605
NP_689742                                                              15    9605
NP_001028217                                                           15    9605
NP_001253979                                                           15    9605
NP_001253980                                                           15    9605
NP_001076428                                                           15    9605
NP_002198                                                              15    9605
NP_057635                                                              15    9605
NP_116223                                                              15    9605
NP_001248757                                                           15    9605
NP_001248756                                                           15    9605
NP_001264277                                                           15    9605
NP_001073160                                                           15    9605
NP_115986                                                              15    9605
NP_079199                                                              15    9605
NP_006866                                                              15    9605
XP_006719306                                                           15    9605
XP_005268722                                                           15    9605
XP_006719221                                                           15    9605
XP_006719220                                                           15    9605
XP_005253448                                                           15    9605
XP_006718966                                                           15    9605
XP_005248768                                                           15    9605
XP_006715522                                                           15    9605
XP_005248767                                                           15    9605
XP_006712406                                                           15    9605
NP_001013642                                                           15    9605
NP_001001965                                                           15    9605
>NP_000224
          Length = 699

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   AGFFTVFA 9
           AGFFTVFA
Sbjct: 442 AGFFTVFA 449
>NP_852111
          Length = 669

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   AGFFTVFA 9
           AGFFTVFA
Sbjct: 419 AGFFTVFA 426
>NP_000136
          Length = 695

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   AGFFTVFA 9
           AGFFTVFA
Sbjct: 445 AGFFTVFA 452
>NP_000360
          Length = 764

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   AGFFTVFA 9
           AGFFTVFA
Sbjct: 497 AGFFTVFA 504
>XP_005268094
          Length = 764

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   AGFFTVFA 9
           AGFFTVFA
Sbjct: 497 AGFFTVFA 504
>XP_005264366
          Length = 380

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   AGFFTVFA 9
           AGFFTVFA
Sbjct: 123 AGFFTVFA 130
>XP_006712078
          Length = 389

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   AGFFTVFA 9
           AGFFTVFA
Sbjct: 132 AGFFTVFA 139
>NP_001001524
          Length = 377

 Score = 18.5 bits (36), Expect =  1135
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MAGFFTVF 8
           +AGFFT+F
Sbjct: 227 LAGFFTLF 234
>XP_005245269
          Length = 532

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   MAGFFTVF 8
           +AGFFT F
Sbjct: 372 LAGFFTYF 379
>XP_006711403
          Length = 961

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   MAGFFTVF 8
           +AGFFT F
Sbjct: 801 LAGFFTYF 808
>NP_653300
          Length = 1029

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   MAGFFTVF 8
           +AGFFT F
Sbjct: 869 LAGFFTYF 876
>NP_001001734
          Length = 165

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  MAGFFTVF 8
          +AGFFT F
Sbjct: 5  LAGFFTYF 12
>NP_001171761
          Length = 1099

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   GFFTVFA 9
           GFF+VFA
Sbjct: 379 GFFSVFA 385
>NP_000329
          Length = 1099

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   GFFTVFA 9
           GFF+VFA
Sbjct: 379 GFFSVFA 385
>XP_006720719
          Length = 1097

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   GFFTVFA 9
           GFF+VFA
Sbjct: 411 GFFSVFA 417
>XP_005254663
          Length = 1099

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   GFFTVFA 9
           GFF+VFA
Sbjct: 379 GFFSVFA 385
>XP_005254662
          Length = 1131

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   GFFTVFA 9
           GFF+VFA
Sbjct: 411 GFFSVFA 417
>NP_001124468
          Length = 835

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   MAGFFTVFA 9
           +AG FT+F+
Sbjct: 94  IAGLFTIFS 102
>NP_000850
          Length = 888

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   MAGFFTVFA 9
           +AG FT+F+
Sbjct: 94  IAGLFTIFS 102
>NP_001028252
          Length = 351

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   MAGFFT 6
           MAGFFT
Sbjct: 215 MAGFFT 220
>NP_055441
          Length = 306

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   MAGFFT 6
           MAGFFT
Sbjct: 170 MAGFFT 175
>NP_001186438
          Length = 270

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2  AGFFTV 7
          AGFFTV
Sbjct: 89 AGFFTV 94
>NP_054768
          Length = 621

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   MAGFFTVFA 9
           +A  FTVFA
Sbjct: 219 LANIFTVFA 227
>NP_005688
          Length = 329

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   MAGFFTVFA 9
           +AGFFT+ A
Sbjct: 268 VAGFFTLCA 276
>NP_001186439
          Length = 258

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2  AGFFTV 7
          AGFFTV
Sbjct: 89 AGFFTV 94
>XP_006720432
          Length = 372

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   MAGFFTVFA 9
           +AGFFT+ A
Sbjct: 311 VAGFFTLCA 319
>NP_004819
          Length = 276

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2  AGFFTV 7
          AGFFTV
Sbjct: 89 AGFFTV 94
>NP_001029031
          Length = 633

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   MAGFFTVFA 9
           +A  FTVFA
Sbjct: 233 LADIFTVFA 241
>NP_001257377
          Length = 579

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   MAGFFTVFA 9
           +A  FTVFA
Sbjct: 179 LADIFTVFA 187
>NP_000009
          Length = 655

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   MAGFFTVFA 9
           +A  FTVFA
Sbjct: 255 LADIFTVFA 263
>NP_001005283
          Length = 314

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   MAGFFTVF 8
           +AGFF+ F
Sbjct: 150 VAGFFSAF 157
>NP_001257376
          Length = 678

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   MAGFFTVFA 9
           +A  FTVFA
Sbjct: 278 LADIFTVFA 286
>NP_001171313
          Length = 610

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1 MAGFFTVFA 9
         M  FFT+F+
Sbjct: 1 MLDFFTIFS 9
>NP_003130
          Length = 638

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1 MAGFFTVFA 9
         M  FFT+F+
Sbjct: 1 MLDFFTIFS 9
>NP_001171516
          Length = 634

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   AGFFTVF 8
           +GFF+VF
Sbjct: 577 SGFFSVF 583
>NP_001171515
          Length = 668

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   AGFFTVF 8
           +GFF+VF
Sbjct: 611 SGFFSVF 617
>NP_079533
          Length = 710

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   AGFFTVF 8
           +GFF+VF
Sbjct: 653 SGFFSVF 659
>XP_006721579
          Length = 708

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   MAGFFTVFA 9
           +A  FTVFA
Sbjct: 301 LADIFTVFA 309
>XP_006710508
          Length = 677

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GFFTVFA 9
           GFF+V+A
Sbjct: 624 GFFSVYA 630
>XP_006710507
          Length = 719

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GFFTVFA 9
           GFF+V+A
Sbjct: 666 GFFSVYA 672
>NP_689910
          Length = 719

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GFFTVFA 9
           GFF+V+A
Sbjct: 666 GFFSVYA 672
>NP_001123530
          Length = 717

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   GFFTVFA 9
           GFF+V+A
Sbjct: 666 GFFSVYA 672
>NP_473445
          Length = 311

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   MAGFFTVF 8
           ++GF T+F
Sbjct: 147 LSGFLTIF 154
>NP_066000
          Length = 771

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1 MAGFFT 6
         M+GFFT
Sbjct: 1 MSGFFT 6
>NP_060542
          Length = 2144

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    MAGFFTVFA 9
            + G FT+FA
Sbjct: 1947 LKGLFTLFA 1955
>NP_821138
          Length = 398

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   AGFFTVFA 9
           A FFT+F+
Sbjct: 215 AAFFTLFS 222
>NP_112184
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>NP_001171817
          Length = 341

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 264 LSGFFTI 270
>NP_001008892
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>NP_001008894
          Length = 341

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 264 LSGFFTI 270
>NP_001008860
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>NP_001171818
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>NP_997213
          Length = 410

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 341 LSGFFTI 347
>XP_006720431
          Length = 274

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 197 LSGFFTI 203
>XP_006720430
          Length = 341

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 264 LSGFFTI 270
>XP_006720429
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>XP_005272610
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>XP_005272609
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>XP_006720428
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>XP_005272606
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>XP_005272605
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>XP_005272607
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>XP_006720427
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>XP_005272604
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>XP_005272603
          Length = 360

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   MAGFFTV 7
           ++GFFT+
Sbjct: 283 LSGFFTI 289
>XP_006713781
          Length = 771

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1 MAGFFT 6
         M+GFFT
Sbjct: 1 MSGFFT 6
>NP_005496
          Length = 509

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   AGFFTVF 8
           +G FTVF
Sbjct: 216 SGLFTVF 222
>NP_005996
          Length = 890

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   MAGFFTV 7
           + GFFTV
Sbjct: 435 ITGFFTV 441
>NP_036566
          Length = 495

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  GFFTVFA 9
          GFF V+A
Sbjct: 49 GFFIVYA 55

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   FFTVFA 9
           FFT+FA
Sbjct: 473 FFTLFA 478
>NP_001139325
          Length = 890

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   MAGFFTV 7
           + GFFTV
Sbjct: 435 ITGFFTV 441
>NP_060960
          Length = 951

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   MAGFFTVFA 9
           +AGF  VF+
Sbjct: 620 VAGFLAVFS 628
>NP_001073932
          Length = 4314

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   AGFFTVFA 9
           +GF T+F+
Sbjct: 834 SGFLTIFS 841
>NP_001368
          Length = 4307

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   AGFFTVFA 9
           +GF T+F+
Sbjct: 834 SGFLTIFS 841
>NP_689742
          Length = 870

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   AGFFTVFA 9
           AG F +FA
Sbjct: 134 AGLFPIFA 141
>NP_001028217
          Length = 870

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   AGFFTVFA 9
           AG F +FA
Sbjct: 134 AGLFPIFA 141
>NP_001253979
          Length = 870

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   AGFFTVFA 9
           AG F +FA
Sbjct: 134 AGLFPIFA 141
>NP_001253980
          Length = 842

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   AGFFTVFA 9
           AG F +FA
Sbjct: 134 AGLFPIFA 141
>NP_001076428
          Length = 506

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   AGFFTVF 8
           +G FTVF
Sbjct: 216 SGLFTVF 222
>NP_002198
          Length = 1035

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   MAGFFT 6
           +AGFFT
Sbjct: 198 IAGFFT 203
>NP_057635
          Length = 570

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   FFTVFA 9
           FFT+FA
Sbjct: 297 FFTLFA 302
>NP_116223
          Length = 473

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   FFTVFA 9
           FFT+FA
Sbjct: 158 FFTLFA 163
>NP_001248757
          Length = 712

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  MAGFFTVFA 9
          + GF T+FA
Sbjct: 56 IVGFGTIFA 64
>NP_001248756
          Length = 695

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  MAGFFTVFA 9
          + GF T+FA
Sbjct: 56 IVGFGTIFA 64
>NP_001264277
          Length = 145

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   FFTVFA 9
           FFTVF+
Sbjct: 100 FFTVFS 105
>NP_001073160
          Length = 662

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  MAGFFTVFA 9
          + GF T+FA
Sbjct: 56 IVGFGTIFA 64
>NP_115986
          Length = 679

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  MAGFFTVFA 9
          + GF T+FA
Sbjct: 56 IVGFGTIFA 64
>NP_079199
          Length = 1887

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    FFTVFA 9
            FFT+FA
Sbjct: 1811 FFTLFA 1816
>NP_006866
          Length = 311

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  GFFTVFA 9
          GF TVFA
Sbjct: 42 GFGTVFA 48
>XP_006719306
          Length = 413

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   FFTVFA 9
           FFT+FA
Sbjct: 98  FFTLFA 103
>XP_005268722
          Length = 413

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   FFTVFA 9
           FFT+FA
Sbjct: 98  FFTLFA 103
>XP_006719221
          Length = 413

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   FFTVFA 9
           FFT+FA
Sbjct: 98  FFTLFA 103
>XP_006719220
          Length = 413

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   FFTVFA 9
           FFT+FA
Sbjct: 98  FFTLFA 103
>XP_005253448
          Length = 519

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   FFTVFA 9
           FFT+FA
Sbjct: 297 FFTLFA 302
>XP_006718966
          Length = 4300

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   AGFFTVFA 9
           +GF T+F+
Sbjct: 834 SGFLTIFS 841
>XP_005248768
          Length = 429

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   FFTVFA 9
           FFT+FA
Sbjct: 407 FFTLFA 412
>XP_006715522
          Length = 442

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  GFFTVFA 9
          GFF V+A
Sbjct: 49 GFFIVYA 55

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   FFTVFA 9
           FFT+FA
Sbjct: 420 FFTLFA 425
>XP_005248767
          Length = 478

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  GFFTVFA 9
          GFF V+A
Sbjct: 32 GFFIVYA 38

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   FFTVFA 9
           FFT+FA
Sbjct: 456 FFTLFA 461
>XP_006712406
          Length = 785

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   AGFFTVFA 9
           AG F +FA
Sbjct: 134 AGLFPIFA 141
>NP_001013642
          Length = 473

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   FFTVFA 9
           FFT+FA
Sbjct: 158 FFTLFA 163
>NP_001001965
          Length = 318

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  FFTVFA 9
          FFTVF+
Sbjct: 27 FFTVFS 32
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.355    0.152    0.483 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 450,655
Number of extensions: 783
Number of successful extensions: 103
Number of sequences better than 10000.0: 100
Number of HSP's gapped: 103
Number of HSP's successfully gapped: 103
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (17.0 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package