Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 665 NP_001035957 19 665 XP_006721990 19 665 XP_006721989 19 665 XP_005258041 19 665 XP_006721988 19 665 XP_006721987 19 665 XP_006721986 19 665 XP_005258040 19 665 XP_006721985 19 665 NP_001091952 16 5631 NP_056136 16 5631 NP_775832 16 5631 NP_001253981 16 5631 XP_006722773 16 5631 XP_005259893 16 5631 XP_005259892 16 5631 XP_005259891 16 5631 XP_005259890 16 5631 XP_005257983 16 5631 NP_775259 16 5631 NP_001028748 16 5631 NP_005195 16 7355 NP_001231063 16 7355 NP_055289 16 7355 NP_060240 16 7355 NP_078836 16 7355 XP_005269208 16 7355 XP_006719664 16 7355 XP_005269207 16 7355 XP_006717440 16 7355 XP_005252421 16 7355 XP_005252423 16 7355 XP_005249257 16 7355 NP_000531 15 9605 NP_001036188 15 9605 NP_612146 15 9605 NP_001258975 15 9605 NP_848613 15 9605 NP_001239081 15 9605 NP_001239080 15 9605 NP_387467 15 9605 NP_001239077 15 9605 NP_060845 15 9605 XP_006726609 15 9605 XP_006723382 15 9605 XP_006723381 15 9605 XP_006723380 15 9605 XP_005256671 15 9605 XP_005267891 15 9605 XP_006719787 15 9605 XP_005269291 15 9605 XP_006712960 15 9605 XP_006710027 15 9605>NP_000258 Length = 2818 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LYSAGTTLL 9 LYSAGT LL Sbjct: 2309 LYSAGTALL 2317>NP_001035957 Length = 2839 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LYSAGTTLL 9 LYSAGT LL Sbjct: 2330 LYSAGTALL 2338>XP_006721990 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LYSAGTTLL 9 LYSAGT LL Sbjct: 2340 LYSAGTALL 2348>XP_006721989 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LYSAGTTLL 9 LYSAGT LL Sbjct: 2340 LYSAGTALL 2348>XP_005258041 Length = 2836 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LYSAGTTLL 9 LYSAGT LL Sbjct: 2309 LYSAGTALL 2317>XP_006721988 Length = 2846 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LYSAGTTLL 9 LYSAGT LL Sbjct: 2319 LYSAGTALL 2327>XP_006721987 Length = 2849 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LYSAGTTLL 9 LYSAGT LL Sbjct: 2340 LYSAGTALL 2348>XP_006721986 Length = 2854 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LYSAGTTLL 9 LYSAGT LL Sbjct: 2327 LYSAGTALL 2335>XP_005258040 Length = 2857 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LYSAGTTLL 9 LYSAGT LL Sbjct: 2330 LYSAGTALL 2338>XP_006721985 Length = 2867 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LYSAGTTLL 9 LYSAGT LL Sbjct: 2340 LYSAGTALL 2348>NP_001091952 Length = 650 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 LYS G+TL Sbjct: 536 LYSPGSTL 543>NP_056136 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 LYS G+TL Sbjct: 520 LYSPGSTL 527>NP_775832 Length = 518 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YSAGTTLL 9 YS+ TTLL Sbjct: 194 YSSNTTLL 201>NP_001253981 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LYSAGTTLL 9 LYS TTL+ Sbjct: 570 LYSVATTLV 578>XP_006722773 Length = 512 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 LYS G+TL Sbjct: 398 LYSPGSTL 405>XP_005259893 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 LYS G+TL Sbjct: 415 LYSPGSTL 422>XP_005259892 Length = 564 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 LYS G+TL Sbjct: 450 LYSPGSTL 457>XP_005259891 Length = 605 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 LYS G+TL Sbjct: 491 LYSPGSTL 498>XP_005259890 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 LYS G+TL Sbjct: 507 LYSPGSTL 514>XP_005257983 Length = 850 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LYSAGTTLL 9 LYS TTL+ Sbjct: 491 LYSVATTLV 499>NP_775259 Length = 931 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LYSAGTTLL 9 LYS TTL+ Sbjct: 572 LYSVATTLV 580>NP_001028748 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LYSAGTTLL 9 LYS TTL+ Sbjct: 570 LYSVATTLV 578>NP_005195 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LYSAGTTLL 9 +YS G TL+ Sbjct: 310 IYSLGATLI 318>NP_001231063 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LYSAGTTLL 9 +YS G TL+ Sbjct: 310 IYSLGATLI 318>NP_055289 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LYSAGTT 7 LY++GTT Sbjct: 429 LYASGTT 435>NP_060240 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LYSAGTTLL 9 LY+ G TLL Sbjct: 70 LYNLGITLL 78>NP_078836 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LYSAGTT 7 LY++GTT Sbjct: 297 LYTSGTT 303>XP_005269208 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LYSAGTT 7 LY++GTT Sbjct: 297 LYTSGTT 303>XP_006719664 Length = 578 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LYSAGTT 7 LY++GTT Sbjct: 189 LYTSGTT 195>XP_005269207 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LYSAGTT 7 LY++GTT Sbjct: 296 LYTSGTT 302>XP_006717440 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LYSAGTTLL 9 +YS G TL+ Sbjct: 310 IYSLGATLI 318>XP_005252421 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LYSAGTTLL 9 +YS G TL+ Sbjct: 310 IYSLGATLI 318>XP_005252423 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LYSAGTTLL 9 +YS G TL+ Sbjct: 310 IYSLGATLI 318>XP_005249257 Length = 152 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LYSAGTTLL 9 LY+ G TLL Sbjct: 70 LYNLGITLL 78>NP_000531 Length = 5038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LYSAGTT 7 +YS GTT Sbjct: 3172 IYSLGTT 3178>NP_001036188 Length = 5033 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LYSAGTT 7 +YS GTT Sbjct: 3172 IYSLGTT 3178>NP_612146 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SAGTTLL 9 S GTTLL Sbjct: 301 SGGTTLL 307>NP_001258975 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SAGTTL 8 SAGTTL Sbjct: 351 SAGTTL 356>NP_848613 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YSAGTTLL 9 Y AG TLL Sbjct: 115 YDAGFTLL 122>NP_001239081 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 L+SAGT L Sbjct: 130 LFSAGTFL 137>NP_001239080 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 L+SAGT L Sbjct: 130 LFSAGTFL 137>NP_387467 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LYSAGTTLL 9 LYSA TLL Sbjct: 720 LYSAVKTLL 728>NP_001239077 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 L+SAGT L Sbjct: 225 LFSAGTFL 232>NP_060845 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 L+SAGT L Sbjct: 248 LFSAGTFL 255>XP_006726609 Length = 2838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 LY++GT L Sbjct: 1528 LYNSGTVL 1535>XP_006723382 Length = 5027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LYSAGTT 7 +YS GTT Sbjct: 3172 IYSLGTT 3178>XP_006723381 Length = 5031 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LYSAGTT 7 +YS GTT Sbjct: 3171 IYSLGTT 3177>XP_006723380 Length = 5032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LYSAGTT 7 +YS GTT Sbjct: 3172 IYSLGTT 3178>XP_005256671 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YSAGTTLL 9 Y AG TLL Sbjct: 115 YDAGFTLL 122>XP_005267891 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 L+SAGT L Sbjct: 182 LFSAGTFL 189>XP_006719787 Length = 2838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 LY++GT L Sbjct: 1528 LYNSGTVL 1535>XP_005269291 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LYSAGTTLL 9 LYSA TLL Sbjct: 720 LYSAVKTLL 728>XP_006712960 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 LY+A TTL Sbjct: 19 LYNAHTTL 26>XP_006710027 Length = 2837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LYSAGTTL 8 LY++GT L Sbjct: 1527 LYNSGTVL 1534Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.132 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 519,534 Number of extensions: 849 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |