Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001244163 17 4312 NP_001244166 17 4312 NP_001244159 17 4312 NP_001244160 17 4312 NP_001093392 17 4312 NP_057323 17 4312 XP_006724767 17 4312 XP_006724766 17 4312 XP_006724765 17 4312 XP_006724764 17 4312 XP_006724763 17 4312 XP_006724762 17 4312 XP_006724761 17 4312 XP_006724760 17 4312 XP_006724759 17 4312 XP_006724758 17 4312 XP_006724757 17 4312 XP_006724756 17 4312 XP_005256732 17 4312 XP_006718366 16 5631 XP_005253166 16 5631 NP_004445 16 7355 NP_733751 16 7355 NP_001161437 16 7355 NP_113621 16 7355 NP_689711 16 7355 NP_001182760 16 7355 NP_775934 16 7355 NP_079466 16 7355 NP_001252544 16 7355 XP_006716142 16 7355 XP_005250088 16 7355 XP_006716141 16 7355 XP_005250085 16 7355 XP_006716140 16 7355 XP_005250084 16 7355 XP_005250083 16 7355 XP_005250082 16 7355 XP_006714917 16 7355 XP_006714916 16 7355 XP_006714915 16 7355 XP_006714914 16 7355 XP_006714913 16 7355 XP_006714912 16 7355 XP_006714911 16 7355 XP_006714910 16 7355 XP_006714909 16 7355 XP_006714908 16 7355 XP_006714907 16 7355 XP_006714906 16 7355 XP_006714905 16 7355 XP_006714904 16 7355 XP_005265946 16 7355 XP_006712733 16 7355 XP_006712732 16 7355 XP_006712731 16 7355 XP_006712730 16 7355 XP_006712729 16 7355 XP_006712728 16 7355 XP_006712727 16 7355 XP_006712726 16 7355 XP_006712725 16 7355 XP_006712724 16 7355 XP_005264052 16 7355 XP_006710447 16 7355 XP_006710446 16 7355 XP_006710445 16 7355 XP_005270577 16 7355 NP_003382 15 9605 NP_055616 15 9605 XP_006716172 15 9605 XP_006711879 15 9605 XP_005273329 15 9605>NP_001244163 Length = 954 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 598 SHRQMS 603>NP_001244166 Length = 954 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 598 SHRQMS 603>NP_001244159 Length = 954 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 598 SHRQMS 603>NP_001244160 Length = 1059 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 624 SHRQMS 629>NP_001093392 Length = 1137 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 702 SHRQMS 707>NP_057323 Length = 3530 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 LVS HRQ + Sbjct: 3384 LVSQHRQQT 3392>XP_006724767 Length = 641 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 206 SHRQMS 211>XP_006724766 Length = 645 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 210 SHRQMS 215>XP_006724765 Length = 652 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 217 SHRQMS 222>XP_006724764 Length = 861 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 702 SHRQMS 707>XP_006724763 Length = 901 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 702 SHRQMS 707>XP_006724762 Length = 903 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 702 SHRQMS 707>XP_006724761 Length = 1033 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 598 SHRQMS 603>XP_006724760 Length = 1033 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 598 SHRQMS 603>XP_006724759 Length = 1033 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 598 SHRQMS 603>XP_006724758 Length = 1058 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 702 SHRQMS 707>XP_006724757 Length = 1080 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 645 SHRQMS 650>XP_006724756 Length = 1124 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SHRQMS 9 SHRQMS Sbjct: 702 SHRQMS 707>XP_005256732 Length = 3531 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 LVS HRQ + Sbjct: 3385 LVSQHRQQT 3393>XP_006718366 Length = 451 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSHR +S Sbjct: 40 VSSHRTLS 47>XP_005253166 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSHR +S Sbjct: 40 VSSHRTLS 47>NP_004445 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSHRQMS 9 S HRQMS Sbjct: 242 SYHRQMS 248>NP_733751 Length = 4911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVSSHR 6 LVSSHR Sbjct: 4126 LVSSHR 4131>NP_001161437 Length = 698 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSHRQMS 9 SSH QMS Sbjct: 275 SSHSQMS 281>NP_113621 Length = 579 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVSSHRQMS 9 LVSSH +++ Sbjct: 385 LVSSHHELA 393>NP_689711 Length = 698 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSHRQMS 9 SSH QMS Sbjct: 275 SSHSQMS 281>NP_001182760 Length = 1283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSHRQMS 9 SSH QMS Sbjct: 275 SSHSQMS 281>NP_775934 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 251 ITGSHQQMS 259>NP_079466 Length = 1353 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSH+Q S Sbjct: 527 VSSHKQPS 534>NP_001252544 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 251 ITGSHQQMS 259>XP_006716142 Length = 4927 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVSSHR 6 LVSSHR Sbjct: 4142 LVSSHR 4147>XP_005250088 Length = 4928 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVSSHR 6 LVSSHR Sbjct: 4143 LVSSHR 4148>XP_006716141 Length = 4959 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVSSHR 6 LVSSHR Sbjct: 4174 LVSSHR 4179>XP_005250085 Length = 4979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVSSHR 6 LVSSHR Sbjct: 4198 LVSSHR 4203>XP_006716140 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVSSHR 6 LVSSHR Sbjct: 4197 LVSSHR 4202>XP_005250084 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVSSHR 6 LVSSHR Sbjct: 4197 LVSSHR 4202>XP_005250083 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVSSHR 6 LVSSHR Sbjct: 4197 LVSSHR 4202>XP_005250082 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVSSHR 6 LVSSHR Sbjct: 4198 LVSSHR 4203>XP_006714917 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 251 ITGSHQQMS 259>XP_006714916 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 251 ITGSHQQMS 259>XP_006714915 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 148 ITGSHQQMS 156>XP_006714914 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 275 ITGSHQQMS 283>XP_006714913 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 240 ITGSHQQMS 248>XP_006714912 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 251 ITGSHQQMS 259>XP_006714911 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 251 ITGSHQQMS 259>XP_006714910 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 252 ITGSHQQMS 260>XP_006714909 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 252 ITGSHQQMS 260>XP_006714908 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 252 ITGSHQQMS 260>XP_006714907 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 252 ITGSHQQMS 260>XP_006714906 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 252 ITGSHQQMS 260>XP_006714905 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 280 ITGSHQQMS 288>XP_006714904 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 294 ITGSHQQMS 302>XP_005265946 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVSSHRQMS 9 + SH+QMS Sbjct: 328 ITGSHQQMS 336>XP_006712733 Length = 759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSH+Q S Sbjct: 527 VSSHKQPS 534>XP_006712732 Length = 938 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSH+Q S Sbjct: 527 VSSHKQPS 534>XP_006712731 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSH+Q S Sbjct: 276 VSSHKQPS 283>XP_006712730 Length = 1106 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSH+Q S Sbjct: 280 VSSHKQPS 287>XP_006712729 Length = 1121 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSH+Q S Sbjct: 295 VSSHKQPS 302>XP_006712728 Length = 1307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSH+Q S Sbjct: 481 VSSHKQPS 488>XP_006712727 Length = 1319 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSH+Q S Sbjct: 493 VSSHKQPS 500>XP_006712726 Length = 1319 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSH+Q S Sbjct: 527 VSSHKQPS 534>XP_006712725 Length = 1352 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSH+Q S Sbjct: 527 VSSHKQPS 534>XP_006712724 Length = 1353 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSH+Q S Sbjct: 527 VSSHKQPS 534>XP_005264052 Length = 1353 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSSHRQMS 9 VSSH+Q S Sbjct: 527 VSSHKQPS 534>XP_006710447 Length = 1192 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSHRQMS 9 SSH QMS Sbjct: 275 SSHSQMS 281>XP_006710446 Length = 1239 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSHRQMS 9 SSH QMS Sbjct: 264 SSHSQMS 270>XP_006710445 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSHRQMS 9 SSH QMS Sbjct: 275 SSHSQMS 281>XP_005270577 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSHRQMS 9 SSH QMS Sbjct: 275 SSHSQMS 281>NP_003382 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVSSHRQM 8 LVSS RQ+ Sbjct: 47 LVSSQRQL 54>NP_055616 Length = 2137 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LVSSHRQM 8 L+S+HR++ Sbjct: 1210 LISNHRRL 1217>XP_006716172 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVSSHRQM 8 LVSS RQ+ Sbjct: 18 LVSSQRQL 25>XP_006711879 Length = 1364 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LVSSHRQM 8 L+S+HR++ Sbjct: 1210 LISNHRRL 1217>XP_005273329 Length = 1934 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LVSSHRQM 8 L+S+HR++ Sbjct: 1007 LISNHRRL 1014Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.113 0.283 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 571,712 Number of extensions: 660 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |