Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002824 17 2528 NP_001008392 17 4312 NP_065390 16 7355 NP_056505 16 7355 NP_056127 16 7355 NP_001230242 16 7355 XP_006714407 16 7355 XP_006714405 16 7355 XP_005263349 16 7355 XP_005263348 16 7355 XP_005263346 16 7355 XP_005263345 16 7355 XP_005263344 16 7355 XP_005263343 16 7355 XP_005263342 16 7355 XP_005263341 16 7355 XP_005263340 16 7355 XP_005263339 16 7355 XP_006712484 16 7355 XP_006712483 16 7355 XP_005246521 16 7355 NP_079285 15 9605 NP_006493 15 9605 NP_001167560 15 9605 NP_001275920 15 9605 NP_443120 15 9605 NP_114423 15 9605 NP_001167561 15 9605 NP_065879 15 9605 NP_898898 15 9605 NP_060900 15 9605 NP_001275919 15 9605 XP_005260914 15 9605 XP_005260913 15 9605 XP_005258580 15 9605 XP_005256111 15 9605 XP_005256110 15 9605 XP_005256109 15 9605 XP_005256108 15 9605 XP_005256106 15 9605 XP_006715181 15 9605 XP_005249243 15 9605 XP_005262777 15 9605 XP_005262774 15 9605 XP_005265845 15 9605 XP_006714118 15 9605>NP_002824 Length = 593 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LVSLLLKEK 9 ++SLLLK+K Sbjct: 201 IISLLLKDK 209>NP_001008392 Length = 1079 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLLLKEK 9 +SLLLKE+ Sbjct: 928 ISLLLKER 935>NP_065390 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LVSLLLK 7 LVSLLLK Sbjct: 232 LVSLLLK 238>NP_056505 Length = 1315 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVSLLLKE 8 LVSL+LK+ Sbjct: 208 LVSLILKD 215>NP_056127 Length = 5005 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLLKEK 9 LVS LKEK Sbjct: 4868 LVSAYLKEK 4876>NP_001230242 Length = 1294 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVSLLLKE 8 LVSL+LK+ Sbjct: 208 LVSLILKD 215>XP_006714407 Length = 5004 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLLKEK 9 LVS LKEK Sbjct: 4867 LVSAYLKEK 4875>XP_006714405 Length = 4103 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLLKEK 9 LVS LKEK Sbjct: 3966 LVSAYLKEK 3974>XP_005263349 Length = 4410 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLLKEK 9 LVS LKEK Sbjct: 4273 LVSAYLKEK 4281>XP_005263348 Length = 4443 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLLKEK 9 LVS LKEK Sbjct: 4306 LVSAYLKEK 4314>XP_005263346 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLLKEK 9 LVS LKEK Sbjct: 4846 LVSAYLKEK 4854>XP_005263345 Length = 4991 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLLKEK 9 LVS LKEK Sbjct: 4854 LVSAYLKEK 4862>XP_005263344 Length = 5005 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLLKEK 9 LVS LKEK Sbjct: 4868 LVSAYLKEK 4876>XP_005263343 Length = 5009 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLLKEK 9 LVS LKEK Sbjct: 4872 LVSAYLKEK 4880>XP_005263342 Length = 5025 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLLKEK 9 LVS LKEK Sbjct: 4888 LVSAYLKEK 4896>XP_005263341 Length = 5026 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLLKEK 9 LVS LKEK Sbjct: 4889 LVSAYLKEK 4897>XP_005263340 Length = 5026 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLLKEK 9 LVS LKEK Sbjct: 4889 LVSAYLKEK 4897>XP_005263339 Length = 5026 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLLKEK 9 LVS LKEK Sbjct: 4889 LVSAYLKEK 4897>XP_006712484 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVSLLLKE 8 LVSL+LK+ Sbjct: 208 LVSLILKD 215>XP_006712483 Length = 1306 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVSLLLKE 8 LVSL+LK+ Sbjct: 208 LVSLILKD 215>XP_005246521 Length = 1315 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVSLLLKE 8 LVSL+LK+ Sbjct: 208 LVSLILKD 215>NP_079285 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVSLLLKEK 9 +VSL+ KEK Sbjct: 563 IVSLMEKEK 571>NP_006493 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SLLLKEK 9 SLLLK+K Sbjct: 536 SLLLKQK 542>NP_001167560 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLLLKEK 9 V+LLLKE+ Sbjct: 789 VALLLKEQ 796>NP_001275920 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSLLLKEK 9 +SLL KEK Sbjct: 130 ISLLKKEK 137>NP_443120 Length = 947 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVSLLLKE 8 L+SLL+KE Sbjct: 17 LLSLLVKE 24>NP_114423 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLLLKEK 9 V+LLLKE+ Sbjct: 805 VALLLKEQ 812>NP_001167561 Length = 918 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLLLKEK 9 V+LLLKE+ Sbjct: 832 VALLLKEQ 839>NP_065879 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LVSLLLKEK 9 LVSLL +EK Sbjct: 276 LVSLLEQEK 284>NP_898898 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVSLLLKEK 9 L+S++ KEK Sbjct: 155 LISIVTKEK 163>NP_060900 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSLLLKEK 9 +SLL KEK Sbjct: 145 ISLLKKEK 152>NP_001275919 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSLLLKEK 9 +SLL KEK Sbjct: 199 ISLLKKEK 206>XP_005260914 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLLLKEK 9 V+LLLKE+ Sbjct: 770 VALLLKEQ 777>XP_005260913 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLLLKEK 9 V+LLLKE+ Sbjct: 912 VALLLKEQ 919>XP_005258580 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LVSLLLKEK 9 LVSLL +EK Sbjct: 276 LVSLLEQEK 284>XP_005256111 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSLLLKEK 9 +SLL KEK Sbjct: 9 ISLLKKEK 16>XP_005256110 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSLLLKEK 9 +SLL KEK Sbjct: 9 ISLLKKEK 16>XP_005256109 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSLLLKEK 9 +SLL KEK Sbjct: 41 ISLLKKEK 48>XP_005256108 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSLLLKEK 9 +SLL KEK Sbjct: 111 ISLLKKEK 118>XP_005256106 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSLLLKEK 9 +SLL KEK Sbjct: 199 ISLLKKEK 206>XP_006715181 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SLLLKEK 9 SLLLK+K Sbjct: 384 SLLLKQK 390>XP_005249243 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SLLLKEK 9 SLLLK+K Sbjct: 474 SLLLKQK 480>XP_005262777 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVSLLLKEK 9 L+S++ KEK Sbjct: 155 LISIVTKEK 163>XP_005262774 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVSLLLKEK 9 L+S++ KEK Sbjct: 155 LISIVTKEK 163>XP_005265845 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVSLLLKEK 9 +VSL+ KEK Sbjct: 206 IVSLMEKEK 214>XP_006714118 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVSLLLKEK 9 +VSL+ KEK Sbjct: 552 IVSLMEKEK 560Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.140 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 526,782 Number of extensions: 806 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |