Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000360 18 1935 XP_005268094 18 1935 NP_660333 17 3301 XP_005248194 17 3301 NP_065075 17 4312 XP_005246746 17 4312 NP_001120729 17 4312 NP_001176 16 5631 NP_795364 16 5631 NP_958434 16 7355 NP_004359 16 7355 NP_078875 16 7355 NP_001243770 16 7355 NP_009192 16 7355 NP_001005498 16 7355 XP_005257727 16 7355 XP_006722145 16 7355 XP_006722144 16 7355 XP_006722143 16 7355 XP_006722142 16 7355 XP_005257726 16 7355 XP_006721719 16 7355 XP_005257049 16 7355 XP_005257048 16 7355 XP_005257047 16 7355 NP_001702 15 9605 NP_852111 15 9605 NP_000136 15 9605 NP_001129686 15 9605 NP_872425 15 9605 NP_757385 15 9605 NP_001185863 15 9605 NP_258261 15 9605 NP_115807 15 9605 NP_001258126 15 9605 NP_065139 15 9605 XP_005256033 15 9605 XP_005256032 15 9605 XP_005255993 15 9605 XP_005255991 15 9605 XP_005255990 15 9605 XP_005255989 15 9605 XP_005255965 15 9605 XP_006721242 15 9605 XP_005255963 15 9605 XP_006718776 15 9605 XP_006718775 15 9605 XP_006715707 15 9605 XP_005249672 15 9605 XP_006715706 15 9605 XP_006715705 15 9605 XP_005249670 15 9605 XP_006715303 15 9605 NP_001011880 15 9605 NP_543011 15 9605 NP_775890 15 9605 NP_612454 15 9605>NP_000360 Length = 764 Score = 17.7 bits (34), Expect = 1935 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLLALLG 9 VSLLALLG Sbjct: 424 VSLLALLG 431>XP_005268094 Length = 764 Score = 17.7 bits (34), Expect = 1935 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLLALLG 9 VSLLALLG Sbjct: 424 VSLLALLG 431>NP_660333 Length = 1321 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LVSLLALLG 9 L++LLALLG Sbjct: 21 LLALLALLG 29>XP_005248194 Length = 833 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LVSLLALLG 9 L++LLALLG Sbjct: 21 LLALLALLG 29>NP_065075 Length = 831 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LVSLLALLG 9 ++SLL+LLG Sbjct: 416 VISLLSLLG 424>XP_005246746 Length = 898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LVSLLALLG 9 ++SLL+LLG Sbjct: 483 VISLLSLLG 491>NP_001120729 Length = 831 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LVSLLALLG 9 ++SLL+LLG Sbjct: 416 VISLLSLLG 424>NP_001176 Length = 298 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LVSLLALLG 9 L+SLL LLG Sbjct: 8 LLSLLLLLG 16>NP_795364 Length = 307 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LVSLLALLG 9 L SLL+LLG Sbjct: 12 LFSLLSLLG 20>NP_958434 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VSLLALLG 9 VSLLAL G Sbjct: 122 VSLLALAG 129>NP_004359 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VSLLALLG 9 VSLLAL G Sbjct: 122 VSLLALAG 129>NP_078875 Length = 856 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 LVSLLA G Sbjct: 806 LVSLLAFAG 814>NP_001243770 Length = 186 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LVSLLALL 8 L+SLLALL Sbjct: 69 LLSLLALL 76>NP_009192 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LVSLLALL 8 L+SLLALL Sbjct: 182 LLSLLALL 189>NP_001005498 Length = 827 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 LVSLLA G Sbjct: 777 LVSLLAFAG 785>XP_005257727 Length = 827 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 LVSLLA G Sbjct: 777 LVSLLAFAG 785>XP_006722145 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 LVSLLA G Sbjct: 801 LVSLLAFAG 809>XP_006722144 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 LVSLLA G Sbjct: 801 LVSLLAFAG 809>XP_006722143 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 LVSLLA G Sbjct: 801 LVSLLAFAG 809>XP_006722142 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 LVSLLA G Sbjct: 801 LVSLLAFAG 809>XP_005257726 Length = 856 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 LVSLLA G Sbjct: 806 LVSLLAFAG 814>XP_006721719 Length = 169 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LVSLLALL 8 L+SLLALL Sbjct: 52 LLSLLALL 59>XP_005257049 Length = 169 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LVSLLALL 8 L+SLLALL Sbjct: 52 LLSLLALL 59>XP_005257048 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LVSLLALL 8 L+SLLALL Sbjct: 182 LLSLLALL 189>XP_005257047 Length = 263 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LVSLLALL 8 L+SLLALL Sbjct: 182 LLSLLALL 189>NP_001702 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LVSLLAL 7 LVSLLAL Sbjct: 7 LVSLLAL 13>NP_852111 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LVSLLALL 8 LVSLLA L Sbjct: 5 LVSLLAFL 12>NP_000136 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LVSLLALL 8 LVSLLA L Sbjct: 5 LVSLLAFL 12>NP_001129686 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>NP_872425 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>NP_757385 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVSLLALLG 9 +VSL+ LLG Sbjct: 141 IVSLMFLLG 149>NP_001185863 Length = 1492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVSLLALLG 9 L+ LLA+LG Sbjct: 1053 LLGLLAVLG 1061>NP_258261 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVSLLALLG 9 L+ LLA+LG Sbjct: 1025 LLGLLAVLG 1033>NP_115807 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVSLLALLG 9 +VSL+ LLG Sbjct: 141 IVSLMFLLG 149>NP_001258126 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>NP_065139 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VSLLALLG 9 V LLALLG Sbjct: 4 VLLLALLG 11>XP_005256033 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>XP_005256032 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>XP_005255993 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>XP_005255991 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>XP_005255990 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>XP_005255989 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>XP_005255965 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>XP_006721242 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>XP_005255963 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>XP_006718776 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVSLLALLG 9 +VSL+ LLG Sbjct: 141 IVSLMFLLG 149>XP_006718775 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVSLLALLG 9 +VSL+ LLG Sbjct: 141 IVSLMFLLG 149>XP_006715707 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLLALLG 9 +SLL+LLG Sbjct: 26 LSLLSLLG 33>XP_005249672 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLLALLG 9 +SLL+LLG Sbjct: 26 LSLLSLLG 33>XP_006715706 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLLALLG 9 +SLL+LLG Sbjct: 26 LSLLSLLG 33>XP_006715705 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLLALLG 9 +SLL+LLG Sbjct: 44 LSLLSLLG 51>XP_005249670 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLLALLG 9 +SLL+LLG Sbjct: 238 LSLLSLLG 245>XP_006715303 Length = 1463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVSLLALLG 9 L+ LLA+LG Sbjct: 1053 LLGLLAVLG 1061>NP_001011880 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>NP_543011 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 + LLALLG Sbjct: 1 MAGLLALLG 9>NP_775890 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSLLALLG 9 L LLALLG Sbjct: 14 LAVLLALLG 22>NP_612454 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLLALLG 9 +SLL+LLG Sbjct: 26 LSLLSLLG 33Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.154 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 301,692 Number of extensions: 446 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |