Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 20 509 NP_001120972 20 509 XP_006716054 20 509 XP_006716053 20 509 XP_006716052 20 509 XP_006716051 20 509 NP_005766 17 4312 XP_006716331 17 4312 XP_006716330 17 4312 XP_006716329 17 4312 XP_005273427 17 4312 NP_736610 16 5631 NP_938072 16 5631 XP_006719366 16 5631 XP_006719365 16 5631 NP_056134 16 5631 NP_001107854 16 7355 NP_001070651 16 7355 NP_000539 16 7355 XP_005255589 16 7355 XP_005255588 16 7355 XP_005255587 16 7355 XP_005255586 16 7355 XP_005255585 16 7355 XP_005255584 16 7355 XP_005247977 16 7355 NP_055594 16 7355 NP_005958 15 9605 NP_001009571 15 9605 NP_060424 15 9605 NP_001161412 15 9605 NP_009143 15 9605 NP_036417 15 9605 NP_690848 15 9605 NP_001092284 15 9605 XP_005268951 15 9605 XP_006716576 15 9605 XP_005250867 15 9605 XP_005250765 15 9605 XP_005250764 15 9605 XP_005250763 15 9605 XP_005250762 15 9605 XP_005250761 15 9605 XP_005250760 15 9605 XP_005250759 15 9605 XP_005250758 15 9605 XP_005250757 15 9605 XP_005250756 15 9605 XP_005250755 15 9605 XP_005250754 15 9605 XP_005250753 15 9605 XP_005250752 15 9605 XP_005245470 15 9605 NP_002922 15 9605>NP_000236 Length = 1390 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LVSARSISP 9 LVSARS+SP Sbjct: 983 LVSARSVSP 991>NP_001120972 Length = 1408 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LVSARSISP 9 LVSARS+SP Sbjct: 1001 LVSARSVSP 1009>XP_006716054 Length = 960 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LVSARSISP 9 LVSARS+SP Sbjct: 553 LVSARSVSP 561>XP_006716053 Length = 960 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LVSARSISP 9 LVSARS+SP Sbjct: 553 LVSARSVSP 561>XP_006716052 Length = 1409 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LVSARSISP 9 LVSARS+SP Sbjct: 1002 LVSARSVSP 1010>XP_006716051 Length = 1427 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LVSARSISP 9 LVSARS+SP Sbjct: 1020 LVSARSVSP 1028>NP_005766 Length = 671 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LVSARSISP 9 L SARS+SP Sbjct: 332 LGSARSLSP 340>XP_006716331 Length = 656 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LVSARSISP 9 L SARS+SP Sbjct: 317 LGSARSLSP 325>XP_006716330 Length = 671 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LVSARSISP 9 L SARS+SP Sbjct: 332 LGSARSLSP 340>XP_006716329 Length = 710 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LVSARSISP 9 L SARS+SP Sbjct: 371 LGSARSLSP 379>XP_005273427 Length = 725 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LVSARSISP 9 L SARS+SP Sbjct: 386 LGSARSLSP 394>NP_736610 Length = 1409 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSARSISP 9 LVS SISP Sbjct: 1228 LVSQHSISP 1236>NP_938072 Length = 1285 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSARSISP 9 LVS SISP Sbjct: 1104 LVSQHSISP 1112>XP_006719366 Length = 1418 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSARSISP 9 LVS SISP Sbjct: 1237 LVSQHSISP 1245>XP_006719365 Length = 1428 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSARSISP 9 LVS SISP Sbjct: 1247 LVSQHSISP 1255>NP_056134 Length = 1419 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVSARSISP 9 LVS SISP Sbjct: 1238 LVSQHSISP 1246>NP_001107854 Length = 1784 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSARSISP 9 V ARS+SP Sbjct: 534 VMARSLSP 541>NP_001070651 Length = 1740 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSARSISP 9 V ARS+SP Sbjct: 534 VMARSLSP 541>NP_000539 Length = 1807 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSARSISP 9 V ARS+SP Sbjct: 534 VMARSLSP 541>XP_005255589 Length = 1831 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSARSISP 9 V ARS+SP Sbjct: 625 VMARSLSP 632>XP_005255588 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSARSISP 9 V ARS+SP Sbjct: 625 VMARSLSP 632>XP_005255587 Length = 1854 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSARSISP 9 V ARS+SP Sbjct: 625 VMARSLSP 632>XP_005255586 Length = 1855 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSARSISP 9 V ARS+SP Sbjct: 625 VMARSLSP 632>XP_005255585 Length = 1875 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSARSISP 9 V ARS+SP Sbjct: 625 VMARSLSP 632>XP_005255584 Length = 1898 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSARSISP 9 V ARS+SP Sbjct: 625 VMARSLSP 632>XP_005247977 Length = 756 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVSARSIS 8 +VSARS+S Sbjct: 107 VVSARSVS 114>NP_055594 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVSARSIS 8 +VSARS+S Sbjct: 107 VVSARSVS 114>NP_005958 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SARSISP 9 SARS SP Sbjct: 154 SARSFSP 160>NP_001009571 Length = 1255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>NP_060424 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>NP_001161412 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>NP_009143 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVSARSISP 9 LVS RS+ P Sbjct: 94 LVSKRSLRP 102>NP_036417 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVSARSISP 9 LVS+ S+SP Sbjct: 772 LVSSPSLSP 780>NP_690848 Length = 1626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSARSISP 9 ++ARS SP Sbjct: 124 ITARSFSP 131>NP_001092284 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SARSISP 9 SARS SP Sbjct: 155 SARSFSP 161>XP_005268951 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SARSISP 9 SARS SP Sbjct: 154 SARSFSP 160>XP_006716576 Length = 1319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSARSISP 9 ++ARS SP Sbjct: 124 ITARSFSP 131>XP_005250867 Length = 1606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSARSISP 9 ++ARS SP Sbjct: 124 ITARSFSP 131>XP_005250765 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005250764 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005250763 Length = 1260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005250762 Length = 1260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005250761 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005250760 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005250759 Length = 1293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005250758 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005250757 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005250756 Length = 1301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005250755 Length = 1303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005250754 Length = 1305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005250753 Length = 1305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005250752 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SARSISP 9 +ARS+SP Sbjct: 53 AARSVSP 59>XP_005245470 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVSARSISP 9 LVS RS+ P Sbjct: 45 LVSKRSLRP 53>NP_002922 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVSARSISP 9 LVS RS+ P Sbjct: 91 LVSKRSLRP 99Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.121 0.299 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 294,547 Number of extensions: 315 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |