Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1482 NP_001075109 18 1482 NP_004932 18 1935 XP_005257171 18 1935 XP_005257170 18 1935 NP_079350 17 4312 NP_001159605 17 4312 NP_009187 17 4312 XP_006718490 17 4312 XP_006714380 17 4312 XP_006714379 17 4312 XP_006714378 17 4312 XP_006714377 17 4312 NP_001138684 17 4312 NP_001138683 17 4312 NP_001001916 17 4312 NP_005287 16 7355 NP_001264929 16 7355 NP_078881 16 7355 XP_005262183 16 7355 XP_006724702 16 7355 XP_006717499 16 7355 XP_005252492 16 7355 XP_005252489 16 7355 XP_005252488 16 7355 XP_005263273 16 7355 XP_005263272 16 7355 XP_005263271 16 7355 NP_061871 15 9605 NP_001257438 15 9605 NP_001243054 15 9605 NP_002817 15 9605 NP_001004128 15 9605 NP_003456 15 9605 NP_001137361 15 9605 NP_001137360 15 9605 NP_060515 15 9605 NP_001137362 15 9605 NP_001153514 15 9605 NP_060604 15 9605 NP_004466 15 9605 NP_056996 15 9605 NP_001185550 15 9605 NP_001161771 15 9605 NP_001010924 15 9605 NP_919269 15 9605 XP_005258010 15 9605 XP_005258009 15 9605 XP_005258007 15 9605 XP_005266147 15 9605 XP_005266146 15 9605 XP_005250985 15 9605 XP_006716634 15 9605 XP_006716084 15 9605 XP_005264966 15 9605 XP_005271043 15 9605 XP_005271042 15 9605>NP_008835 Length = 4128 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVQTLREPA 9 LVQTL EPA Sbjct: 1372 LVQTLCEPA 1380>NP_001075109 Length = 4097 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVQTLREPA 9 LVQTL EPA Sbjct: 1372 LVQTLCEPA 1380>NP_004932 Length = 1220 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVQTLREPA 9 L+QT+R PA Sbjct: 88 LIQTMRPPA 96>XP_005257171 Length = 1181 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVQTLREPA 9 L+QT+R PA Sbjct: 88 LIQTMRPPA 96>XP_005257170 Length = 1218 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVQTLREPA 9 L+QT+R PA Sbjct: 88 LIQTMRPPA 96>NP_079350 Length = 4012 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVQTLREPA 9 L+QTL+ PA Sbjct: 1265 LLQTLQSPA 1273>NP_001159605 Length = 1976 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVQTLREPA 9 L+QTL+ PA Sbjct: 1265 LLQTLQSPA 1273>NP_009187 Length = 709 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQTLREP 8 L+QTLR P Sbjct: 364 LLQTLRHP 371>XP_006718490 Length = 635 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQTLREP 8 L+QTLR P Sbjct: 364 LLQTLRHP 371>XP_006714380 Length = 3897 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVQTLREPA 9 L+QTL+ PA Sbjct: 1265 LLQTLQSPA 1273>XP_006714379 Length = 3936 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVQTLREPA 9 L+QTL+ PA Sbjct: 1265 LLQTLQSPA 1273>XP_006714378 Length = 3965 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVQTLREPA 9 L+QTL+ PA Sbjct: 1218 LLQTLQSPA 1226>XP_006714377 Length = 4010 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVQTLREPA 9 L+QTL+ PA Sbjct: 1265 LLQTLQSPA 1273>NP_001138684 Length = 565 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQTLREP 8 L+QTLR P Sbjct: 220 LLQTLRHP 227>NP_001138683 Length = 687 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQTLREP 8 L+QTLR P Sbjct: 342 LLQTLRHP 349>NP_001001916 Length = 311 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QTLREP 8 QTLREP Sbjct: 55 QTLREP 60>NP_005287 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LVQTLREPA 9 +++TLR+PA Sbjct: 227 VLRTLRKPA 235>NP_001264929 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LVQTLREPA 9 +++TLR+PA Sbjct: 227 VLRTLRKPA 235>NP_078881 Length = 786 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VQTLREP 8 VQT REP Sbjct: 758 VQTSREP 764>XP_005262183 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LVQTLREPA 9 +++TLR+PA Sbjct: 227 VLRTLRKPA 235>XP_006724702 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LVQTLREPA 9 +++TLR+PA Sbjct: 227 VLRTLRKPA 235>XP_006717499 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QTLREPA 9 QTLR PA Sbjct: 505 QTLRTPA 511>XP_005252492 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QTLREPA 9 QTLR PA Sbjct: 539 QTLRTPA 545>XP_005252489 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QTLREPA 9 QTLR PA Sbjct: 662 QTLRTPA 668>XP_005252488 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QTLREPA 9 QTLR PA Sbjct: 685 QTLRTPA 691>XP_005263273 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VQTLREP 8 VQT REP Sbjct: 666 VQTSREP 672>XP_005263272 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VQTLREP 8 VQT REP Sbjct: 707 VQTSREP 713>XP_005263271 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VQTLREP 8 VQT REP Sbjct: 734 VQTSREP 740>NP_061871 Length = 566 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VQTLRE 7 VQTLRE Sbjct: 85 VQTLRE 90>NP_001257438 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LVQTLRE 7 L+QTLR+ Sbjct: 332 LIQTLRQ 338>NP_001243054 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LVQTLRE 7 L+QTLR+ Sbjct: 358 LIQTLRQ 364>NP_002817 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VQTLRE 7 VQTLRE Sbjct: 143 VQTLRE 148>NP_001004128 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VQTLRE 7 VQTLRE Sbjct: 143 VQTLRE 148>NP_003456 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LVQTLRE 7 L+QTLR+ Sbjct: 377 LIQTLRQ 383>NP_001137361 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VQTLREPA 9 V+TLRE A Sbjct: 298 VETLREEA 305>NP_001137360 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VQTLREPA 9 V+TLRE A Sbjct: 371 VETLREEA 378>NP_060515 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VQTLREPA 9 V+TLRE A Sbjct: 354 VETLREEA 361>NP_001137362 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VQTLREPA 9 V+TLRE A Sbjct: 259 VETLREEA 266>NP_001153514 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVQTLREP 8 L QTLR P Sbjct: 270 LKQTLRSP 277>NP_060604 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVQTLREP 8 L QTLR P Sbjct: 190 LKQTLRSP 197>NP_004466 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVQTLREPA 9 L+ T+R PA Sbjct: 282 LIATVRRPA 290>NP_056996 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVQTLREP 8 L TLREP Sbjct: 644 LSSTLREP 651>NP_001185550 Length = 1121 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVQTLREPA 9 L T+REPA Sbjct: 175 LEATVREPA 183>NP_001161771 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VQTLRE 7 VQTLRE Sbjct: 4 VQTLRE 9>NP_001010924 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LVQTLREP 8 + +TLREP Sbjct: 20 VTKTLREP 27>NP_919269 Length = 1843 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVQTLREPA 9 L T+REPA Sbjct: 175 LEATVREPA 183>XP_005258010 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVQTLREPA 9 L+ T+R PA Sbjct: 205 LIATVRRPA 213>XP_005258009 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVQTLREPA 9 L+ T+R PA Sbjct: 233 LIATVRRPA 241>XP_005258007 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVQTLREPA 9 L+ T+R PA Sbjct: 282 LIATVRRPA 290>XP_005266147 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VQTLRE 7 VQTLRE Sbjct: 177 VQTLRE 182>XP_005266146 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VQTLRE 7 VQTLRE Sbjct: 177 VQTLRE 182>XP_005250985 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVQTLREP 8 L TLREP Sbjct: 644 LSSTLREP 651>XP_006716634 Length = 1420 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVQTLREP 8 L TLREP Sbjct: 658 LSSTLREP 665>XP_006716084 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVQTLREPA 9 L+QT EPA Sbjct: 14 LIQTHLEPA 22>XP_005264966 Length = 1843 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVQTLREPA 9 L T+REPA Sbjct: 175 LEATVREPA 183>XP_005271043 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VQTLREPA 9 V+TLRE A Sbjct: 354 VETLREEA 361>XP_005271042 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VQTLREPA 9 V+TLRE A Sbjct: 371 VETLREEA 378Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.132 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 671,593 Number of extensions: 1049 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |