Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 20 390 NP_001120972 20 390 XP_006716052 20 390 XP_006716051 20 390 NP_001074025 18 1135 XP_005256532 18 1135 NP_659491 18 1135 NP_001127945 18 1935 NP_001265113 18 1935 NP_055430 18 1935 XP_005255922 18 1935 XP_006721236 18 1935 XP_006721235 18 1935 XP_005255921 18 1935 XP_005255920 18 1935 XP_005255919 18 1935 XP_005255918 18 1935 XP_005255917 18 1935 XP_005255916 18 1935 NP_005064 17 2528 NP_079092 17 2528 NP_001241657 17 3301 NP_001241658 17 3301 NP_009008 17 3301 NP_001241656 17 3301 NP_001241655 17 3301 NP_001121598 17 3301 XP_005267350 17 3301 XP_005272048 17 3301 XP_006714680 17 3301 NP_060626 17 4312 NP_056193 17 4312 NP_434701 17 4312 NP_434700 17 4312 NP_065924 17 4312 XP_005265408 17 4312 NP_006608 16 5631 NP_071894 16 5631 XP_006712752 16 5631 NP_002996 16 7355 NP_055417 16 7355 NP_006368 16 7355 NP_001073890 16 7355 XP_006722755 16 7355 XP_006716779 16 7355 XP_005245497 16 7355 XP_005245496 16 7355 XP_005245495 16 7355 XP_005245493 16 7355 XP_005245492 16 7355 NP_003289 15 9605 NP_065974 15 9605 NP_001272478 15 9605 NP_071741 15 9605 NP_001271286 15 9605 NP_851826 15 9605 NP_001185947 15 9605 NP_001185946 15 9605 NP_443194 15 9605 NP_079303 15 9605 NP_060161 15 9605 XP_005259334 15 9605 XP_005259333 15 9605 XP_006714035 15 9605 XP_006714034 15 9605 XP_005247312 15 9605 XP_006713383 15 9605 XP_005265485 15 9605 XP_006712721 15 9605 XP_006712720 15 9605 XP_006712719 15 9605 XP_005246770 15 9605 XP_005246768 15 9605 XP_005246769 15 9605>NP_000236 Length = 1390 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVQRSNEEC 9 LVQRSN EC Sbjct: 18 LVQRSNGEC 26>NP_001120972 Length = 1408 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVQRSNEEC 9 LVQRSN EC Sbjct: 18 LVQRSNGEC 26>XP_006716052 Length = 1409 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVQRSNEEC 9 LVQRSN EC Sbjct: 37 LVQRSNGEC 45>XP_006716051 Length = 1427 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVQRSNEEC 9 LVQRSN EC Sbjct: 37 LVQRSNGEC 45>NP_001074025 Length = 552 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VQRSNEEC 9 V+R+NEEC Sbjct: 401 VKRNNEEC 408>XP_005256532 Length = 531 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VQRSNEEC 9 V+R+NEEC Sbjct: 380 VKRNNEEC 387>NP_659491 Length = 620 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VQRSNEEC 9 V+R+NEEC Sbjct: 469 VKRNNEEC 476>NP_001127945 Length = 1113 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QR+NEE Sbjct: 383 LIQRTNEE 390>NP_001265113 Length = 1144 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QR+NEE Sbjct: 414 LIQRTNEE 421>NP_055430 Length = 1217 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QR+NEE Sbjct: 487 LIQRTNEE 494>XP_005255922 Length = 1154 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QR+NEE Sbjct: 424 LIQRTNEE 431>XP_006721236 Length = 1214 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QR+NEE Sbjct: 484 LIQRTNEE 491>XP_006721235 Length = 1214 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QR+NEE Sbjct: 484 LIQRTNEE 491>XP_005255921 Length = 1227 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QR+NEE Sbjct: 497 LIQRTNEE 504>XP_005255920 Length = 1229 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QR+NEE Sbjct: 499 LIQRTNEE 506>XP_005255919 Length = 1860 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QR+NEE Sbjct: 1292 LIQRTNEE 1299>XP_005255918 Length = 1949 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QR+NEE Sbjct: 1219 LIQRTNEE 1226>XP_005255917 Length = 1984 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QR+NEE Sbjct: 1292 LIQRTNEE 1299>XP_005255916 Length = 2022 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QR+NEE Sbjct: 1292 LIQRTNEE 1299>NP_005064 Length = 708 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVQRSNEEC 9 +VQR N+ C Sbjct: 557 IVQRKNDSC 565>NP_079092 Length = 569 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VQRSNEEC 9 ++RSNE+C Sbjct: 320 LRRSNEDC 327>NP_001241657 Length = 144 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRSNEEC 9 + RSNE+C Sbjct: 40 LSRSNEQC 47>NP_001241658 Length = 144 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRSNEEC 9 + RSNE+C Sbjct: 40 LSRSNEQC 47>NP_009008 Length = 159 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRSNEEC 9 + RSNE+C Sbjct: 40 LSRSNEQC 47>NP_001241656 Length = 149 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRSNEEC 9 + RSNE+C Sbjct: 40 LSRSNEQC 47>NP_001241655 Length = 135 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRSNEEC 9 + RSNE+C Sbjct: 40 LSRSNEQC 47>NP_001121598 Length = 144 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRSNEEC 9 + RSNE+C Sbjct: 40 LSRSNEQC 47>XP_005267350 Length = 159 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRSNEEC 9 + RSNE+C Sbjct: 40 LSRSNEQC 47>XP_005272048 Length = 851 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VQRSNEEC 9 V+RS++EC Sbjct: 705 VERSSDEC 712>XP_006714680 Length = 1002 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VQRSNEEC 9 V+RS++EC Sbjct: 856 VERSSDEC 863>NP_060626 Length = 4363 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRSNEEC 9 V+RS +EC Sbjct: 1275 VERSKQEC 1282>NP_056193 Length = 4388 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VQRSNEEC 9 V+RS +EC Sbjct: 1275 VERSKQEC 1282>NP_434701 Length = 492 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VQRSNEEC 9 VQR EEC Sbjct: 161 VQRLKEEC 168>NP_434700 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VQRSNEEC 9 VQR EEC Sbjct: 161 VQRLKEEC 168>NP_065924 Length = 716 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVQRSNEEC 9 L+Q S+E+C Sbjct: 414 LIQDSSEQC 422>XP_005265408 Length = 716 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVQRSNEEC 9 L+Q S+E+C Sbjct: 414 LIQDSSEQC 422>NP_006608 Length = 1621 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VQRSNEEC 9 ++R N+EC Sbjct: 568 LERENQEC 575>NP_071894 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QRS+EE Sbjct: 180 LLQRSDEE 187>XP_006712752 Length = 190 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 L+QRS+EE Sbjct: 158 LLQRSDEE 165>NP_002996 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 QRSNEEC 9 +R+NE+C Sbjct: 125 KRNNEDC 131>NP_055417 Length = 1358 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LVQRSNEEC 9 L+Q+ E+C Sbjct: 947 LIQQKREQC 955>NP_006368 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQRSNEE 8 L QRSN+E Sbjct: 1565 LSQRSNDE 1572>NP_001073890 Length = 1703 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQRSNEE 8 L QRSN+E Sbjct: 1672 LSQRSNDE 1679>XP_006722755 Length = 1722 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQRSNEE 8 L QRSN+E Sbjct: 1691 LSQRSNDE 1698>XP_006716779 Length = 2399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQRSNEE 8 L QRSN+E Sbjct: 2373 LSQRSNDE 2380>XP_005245497 Length = 768 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 QRSNEEC 9 +R+NE+C Sbjct: 125 KRNNEDC 131>XP_005245496 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 QRSNEEC 9 +R+NE+C Sbjct: 125 KRNNEDC 131>XP_005245495 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 QRSNEEC 9 +R+NE+C Sbjct: 125 KRNNEDC 131>XP_005245493 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 QRSNEEC 9 +R+NE+C Sbjct: 125 KRNNEDC 131>XP_005245492 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 QRSNEEC 9 +R+NE+C Sbjct: 125 KRNNEDC 131>NP_003289 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RSNEEC 9 RSN++C Sbjct: 173 RSNQDC 178>NP_065974 Length = 2354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LVQRSNEEC 9 L +SNE C Sbjct: 817 LESKSNESC 825>NP_001272478 Length = 2352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LVQRSNEEC 9 L +SNE C Sbjct: 815 LESKSNESC 823>NP_071741 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RSNEEC 9 R+N+EC Sbjct: 764 RTNQEC 769>NP_001271286 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 ++QRS+EE Sbjct: 70 ILQRSSEE 77>NP_851826 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 QRSNEEC 9 QRS E C Sbjct: 221 QRSEERC 227>NP_001185947 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 ++QRS+EE Sbjct: 36 ILQRSSEE 43>NP_001185946 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 ++QRS+EE Sbjct: 85 ILQRSSEE 92>NP_443194 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 QRSNEEC 9 QRS E C Sbjct: 253 QRSEERC 259>NP_079303 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVQRSNEEC 9 L QRS+E C Sbjct: 205 LSQRSSEFC 213>NP_060161 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVQRSNEE 8 ++QRS+EE Sbjct: 80 ILQRSSEE 87>XP_005259334 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVQRSNEEC 9 L QRS+E C Sbjct: 115 LSQRSSEFC 123>XP_005259333 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVQRSNEEC 9 L QRS+E C Sbjct: 205 LSQRSSEFC 213>XP_006714035 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RSNEEC 9 R+N+EC Sbjct: 764 RTNQEC 769>XP_006714034 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RSNEEC 9 R+N+EC Sbjct: 764 RTNQEC 769>XP_005247312 Length = 1231 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RSNEEC 9 R+NE+C Sbjct: 30 RTNEDC 35>XP_006713383 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RSNEEC 9 RSN++C Sbjct: 173 RSNQDC 178>XP_005265485 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RSNEEC 9 RSN++C Sbjct: 154 RSNQDC 159>XP_006712721 Length = 1206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LVQRSNEEC 9 L +SNE C Sbjct: 817 LESKSNESC 825>XP_006712720 Length = 1991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LVQRSNEEC 9 L +SNE C Sbjct: 817 LESKSNESC 825>XP_006712719 Length = 2354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LVQRSNEEC 9 L +SNE C Sbjct: 817 LESKSNESC 825>XP_005246770 Length = 2354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LVQRSNEEC 9 L +SNE C Sbjct: 817 LESKSNESC 825>XP_005246768 Length = 2354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LVQRSNEEC 9 L +SNE C Sbjct: 817 LESKSNESC 825>XP_005246769 Length = 2354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LVQRSNEEC 9 L +SNE C Sbjct: 817 LESKSNESC 825Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.124 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 593,008 Number of extensions: 1143 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |