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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001276866                                                           18    1482
NP_004439                                                              18    1482
NP_001276865                                                           18    1482
NP_001005862                                                           18    1482
XP_005257197                                                           18    1482
XP_006721828                                                           18    1482
NP_005219                                                              18    1935
NP_001159580                                                           16    5631
NP_057165                                                              16    5631
NP_001159581                                                           16    5631
XP_005262923                                                           16    5631
XP_005262922                                                           16    5631
XP_005262921                                                           16    5631
XP_005262920                                                           16    5631
XP_005262919                                                           16    5631
XP_005262918                                                           16    5631
NP_004501                                                              15    9605
NP_004500                                                              15    9605
NP_536349                                                              15    9605
NP_683865                                                              15    9605
NP_001171944                                                           15    9605
NP_055523                                                              15    9605
NP_001248393                                                           15    9605
NP_997074                                                              15    9605
NP_001248394                                                           15    9605
NP_997078                                                              15    9605
NP_997077                                                              15    9605
NP_997079                                                              15    9605
NP_001248395                                                           15    9605
NP_997080                                                              15    9605
NP_003806                                                              15    9605
XP_006719769                                                           15    9605
XP_005246584                                                           15    9605
XP_006712552                                                           15    9605
XP_006712551                                                           15    9605
XP_006712550                                                           15    9605
XP_006712549                                                           15    9605
XP_005246582                                                           15    9605

>NP_001276866
          Length = 1055

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LTSTVQLV 8
           LTSTVQLV
Sbjct: 790 LTSTVQLV 797



>NP_004439
          Length = 1255

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LTSTVQLV 8
           LTSTVQLV
Sbjct: 790 LTSTVQLV 797



>NP_001276865
          Length = 1240

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LTSTVQLV 8
           LTSTVQLV
Sbjct: 775 LTSTVQLV 782



>NP_001005862
          Length = 1225

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LTSTVQLV 8
           LTSTVQLV
Sbjct: 760 LTSTVQLV 767



>XP_005257197
          Length = 1225

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LTSTVQLV 8
           LTSTVQLV
Sbjct: 760 LTSTVQLV 767



>XP_006721828
          Length = 1336

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   LTSTVQLV 8
           LTSTVQLV
Sbjct: 871 LTSTVQLV 878



>NP_005219
          Length = 1210

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 1   LTSTVQLV 8
           LTSTVQL+
Sbjct: 782 LTSTVQLI 789



>NP_001159580
          Length = 1123

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           TST QLV+
Sbjct: 531 TSTAQLVV 538



>NP_057165
          Length = 1106

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           TST QLV+
Sbjct: 531 TSTAQLVV 538



>NP_001159581
          Length = 777

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           TST QLV+
Sbjct: 149 TSTAQLVV 156



>XP_005262923
          Length = 1018

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           TST QLV+
Sbjct: 149 TSTAQLVV 156



>XP_005262922
          Length = 1276

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           TST QLV+
Sbjct: 531 TSTAQLVV 538



>XP_005262921
          Length = 1309

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           TST QLV+
Sbjct: 531 TSTAQLVV 538



>XP_005262920
          Length = 1347

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           TST QLV+
Sbjct: 531 TSTAQLVV 538



>XP_005262919
          Length = 1383

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           TST QLV+
Sbjct: 531 TSTAQLVV 538



>XP_005262918
          Length = 1400

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           TST QLV+
Sbjct: 531 TSTAQLVV 538



>NP_004501
          Length = 549

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LTSTVQL 7
           LTSTVQ+
Sbjct: 217 LTSTVQV 223



>NP_004500
          Length = 689

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LTSTVQL 7
           LTSTVQ+
Sbjct: 217 LTSTVQV 223



>NP_536349
          Length = 713

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LTSTVQL 7
           LTSTVQ+
Sbjct: 217 LTSTVQV 223



>NP_683865
          Length = 363

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LTSTVQL 7
           LTST+QL
Sbjct: 311 LTSTLQL 317



>NP_001171944
          Length = 555

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LTSTVQL 7
           LTSTVQ+
Sbjct: 223 LTSTVQV 229



>NP_055523
          Length = 2209

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    LTSTVQLVI 9
            LTST  LVI
Sbjct: 1505 LTSTKDLVI 1513



>NP_001248393
          Length = 824

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           T TV+LVI
Sbjct: 222 TKTVELVI 229



>NP_997074
          Length = 772

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           T TV+LVI
Sbjct: 212 TKTVELVI 219



>NP_001248394
          Length = 796

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           T TV+LVI
Sbjct: 212 TKTVELVI 219



>NP_997078
          Length = 838

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           T TV+LVI
Sbjct: 212 TKTVELVI 219



>NP_997077
          Length = 839

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           T TV+LVI
Sbjct: 212 TKTVELVI 219



>NP_997079
          Length = 862

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           T TV+LVI
Sbjct: 212 TKTVELVI 219



>NP_001248395
          Length = 633

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           T TV+LVI
Sbjct: 196 TKTVELVI 203



>NP_997080
          Length = 863

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           T TV+LVI
Sbjct: 212 TKTVELVI 219



>NP_003806
          Length = 814

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TSTVQLVI 9
           T TV+LVI
Sbjct: 212 TKTVELVI 219



>XP_006719769
          Length = 2209

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    LTSTVQLVI 9
            LTST  LVI
Sbjct: 1505 LTSTKDLVI 1513



>XP_005246584
          Length = 510

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1  LTSTVQL 7
          LTSTVQ+
Sbjct: 14 LTSTVQV 20



>XP_006712552
          Length = 648

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LTSTVQL 7
           LTSTVQ+
Sbjct: 223 LTSTVQV 229



>XP_006712551
          Length = 669

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LTSTVQL 7
           LTSTVQ+
Sbjct: 223 LTSTVQV 229



>XP_006712550
          Length = 695

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LTSTVQL 7
           LTSTVQ+
Sbjct: 223 LTSTVQV 229



>XP_006712549
          Length = 713

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LTSTVQL 7
           LTSTVQ+
Sbjct: 217 LTSTVQV 223



>XP_005246582
          Length = 719

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LTSTVQL 7
           LTSTVQ+
Sbjct: 223 LTSTVQV 229



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.324    0.133    0.302 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 230,246
Number of extensions: 215
Number of successful extensions: 38
Number of sequences better than 10000.0: 38
Number of HSP's gapped: 38
Number of HSP's successfully gapped: 38
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)