Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185763 19 665 NP_055459 19 665 XP_006711718 19 665 XP_006711716 19 665 XP_006711715 19 665 XP_006711714 19 665 XP_006711713 19 665 XP_006711712 19 665 XP_006711710 19 665 XP_006711709 19 665 XP_005277503 19 665 XP_005273038 19 665 XP_006711708 19 665 XP_005277500 19 665 XP_006711707 19 665 XP_005277499 19 665 XP_006711706 19 665 XP_006711705 19 665 XP_006710142 19 665 XP_006710141 19 665 NP_008995 16 5631 NP_001019831 16 5631 NP_848594 16 5631 XP_006719330 16 5631 XP_005253911 16 5631 XP_006719329 16 5631 XP_006719328 16 5631 XP_006713877 16 5631 XP_006713876 16 5631 XP_006713875 16 5631 XP_006713874 16 5631 XP_006713873 16 5631 NP_031370 16 7355 NP_000246 16 7355 XP_006717338 16 7355 XP_006717337 16 7355 XP_006717336 16 7355 XP_005249200 16 7355 NP_055973 15 9605 NP_001013457 15 9605 NP_001243805 15 9605 NP_001243806 15 9605 NP_055759 15 9605 NP_001009566 15 9605 NP_001013456 15 9605 NP_005078 15 9605 XP_006716811 15 9605 XP_005251470 15 9605 XP_006716809 15 9605 XP_006716808 15 9605 XP_006716807 15 9605 XP_006716806 15 9605 XP_005251468 15 9605 XP_005251467 15 9605 XP_006713838 15 9605 XP_005247873 15 9605 XP_005247872 15 9605 XP_005247871 15 9605 XP_005247870 15 9605 XP_005263489 15 9605>NP_001185763 Length = 2362 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1142 LTSTIERIN 1150>NP_055459 Length = 2346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1142 LTSTIERIN 1150>XP_006711718 Length = 1436 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 149 LTSTIERIN 157>XP_006711716 Length = 2411 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1208 LTSTIERIN 1216>XP_006711715 Length = 2428 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1142 LTSTIERIN 1150>XP_006711714 Length = 2429 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1142 LTSTIERIN 1150>XP_006711713 Length = 2432 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1145 LTSTIERIN 1153>XP_006711712 Length = 2473 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1305 LTSTIERIN 1313>XP_006711710 Length = 2494 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1208 LTSTIERIN 1216>XP_006711709 Length = 2495 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1208 LTSTIERIN 1216>XP_005277503 Length = 2498 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1305 LTSTIERIN 1313>XP_005273038 Length = 2509 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1305 LTSTIERIN 1313>XP_006711708 Length = 2512 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1305 LTSTIERIN 1313>XP_005277500 Length = 2525 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1305 LTSTIERIN 1313>XP_006711707 Length = 2553 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1305 LTSTIERIN 1313>XP_005277499 Length = 2561 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1305 LTSTIERIN 1313>XP_006711706 Length = 2591 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1305 LTSTIERIN 1313>XP_006711705 Length = 2592 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 1305 LTSTIERIN 1313>XP_006710142 Length = 671 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 94 LTSTIERIN 102>XP_006710141 Length = 672 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSTIKRIN 9 LTSTI+RIN Sbjct: 94 LTSTIERIN 102>NP_008995 Length = 1289 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTSTIKRIN 9 LTS ++R+N Sbjct: 74 LTSPVRRLN 82>NP_001019831 Length = 2986 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTSTIKRIN 9 LTS ++R+N Sbjct: 1771 LTSPVRRLN 1779>NP_848594 Length = 550 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 STIK+IN Sbjct: 193 STIKKIN 199>XP_006719330 Length = 419 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 STIK+IN Sbjct: 193 STIKKIN 199>XP_005253911 Length = 421 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 STIK+IN Sbjct: 193 STIKKIN 199>XP_006719329 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 STIK+IN Sbjct: 193 STIKKIN 199>XP_006719328 Length = 526 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 STIK+IN Sbjct: 193 STIKKIN 199>XP_006713877 Length = 2956 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTSTIKRIN 9 LTS ++R+N Sbjct: 1773 LTSPVRRLN 1781>XP_006713876 Length = 2966 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTSTIKRIN 9 LTS ++R+N Sbjct: 1751 LTSPVRRLN 1759>XP_006713875 Length = 2975 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTSTIKRIN 9 LTS ++R+N Sbjct: 1760 LTSPVRRLN 1768>XP_006713874 Length = 2979 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTSTIKRIN 9 LTS ++R+N Sbjct: 1764 LTSPVRRLN 1772>XP_006713873 Length = 2988 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTSTIKRIN 9 LTS ++R+N Sbjct: 1773 LTSPVRRLN 1781>NP_031370 Length = 905 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TSTIKRI 8 TSTIKR+ Sbjct: 510 TSTIKRM 516>NP_000246 Length = 750 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTSTIKRIN 9 +TS IKR++ Sbjct: 597 ITSAIKRVH 605>XP_006717338 Length = 868 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TSTIKRI 8 TSTIKR+ Sbjct: 473 TSTIKRM 479>XP_006717337 Length = 876 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TSTIKRI 8 TSTIKR+ Sbjct: 481 TSTIKRM 487>XP_006717336 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TSTIKRI 8 TSTIKR+ Sbjct: 537 TSTIKRM 543>XP_005249200 Length = 750 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTSTIKRIN 9 +TS IKR++ Sbjct: 597 ITSAIKRVH 605>NP_055973 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +TIKR+N Sbjct: 56 NTIKRLN 62>NP_001013457 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +T+KR+N Sbjct: 91 ATVKRVN 97>NP_001243805 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +TIKR+N Sbjct: 56 NTIKRLN 62>NP_001243806 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +TIKR+N Sbjct: 56 NTIKRLN 62>NP_055759 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTSTIKRIN 9 +TSTIK N Sbjct: 613 ITSTIKCFN 621>NP_001009566 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTSTIKRIN 9 +TSTIK N Sbjct: 623 ITSTIKCFN 631>NP_001013456 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +T+KR+N Sbjct: 176 ATVKRVN 182>NP_005078 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +T+KR+N Sbjct: 176 ATVKRVN 182>XP_006716811 Length = 1120 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +TIKR+N Sbjct: 56 NTIKRLN 62>XP_005251470 Length = 1284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +TIKR+N Sbjct: 56 NTIKRLN 62>XP_006716809 Length = 1334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +TIKR+N Sbjct: 56 NTIKRLN 62>XP_006716808 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +TIKR+N Sbjct: 56 NTIKRLN 62>XP_006716807 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +TIKR+N Sbjct: 56 NTIKRLN 62>XP_006716806 Length = 1364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +TIKR+N Sbjct: 56 NTIKRLN 62>XP_005251468 Length = 1364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +TIKR+N Sbjct: 56 NTIKRLN 62>XP_005251467 Length = 1364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +TIKR+N Sbjct: 56 NTIKRLN 62>XP_006713838 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +T+KR+N Sbjct: 91 ATVKRVN 97>XP_005247873 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +T+KR+N Sbjct: 302 ATVKRVN 308>XP_005247872 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +T+KR+N Sbjct: 302 ATVKRVN 308>XP_005247871 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +T+KR+N Sbjct: 302 ATVKRVN 308>XP_005247870 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STIKRIN 9 +T+KR+N Sbjct: 302 ATVKRVN 308>XP_005263489 Length = 962 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTSTIKRIN 9 +TSTIK N Sbjct: 604 ITSTIKCFN 612Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.129 0.312 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 302,981 Number of extensions: 395 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |