Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 229 NP_001075109 21 229 NP_001138760 17 3301 NP_647480 17 3301 NP_056155 17 4312 XP_005265063 17 4312 NP_149040 17 4312 NP_002323 16 7355 NP_000785 16 7355 NP_783864 16 7355 NP_056506 16 7355 NP_001121696 16 7355 NP_001017395 16 7355 XP_005262701 16 7355 XP_006713617 16 7355 XP_006713616 16 7355 XP_006713615 16 7355 XP_006713614 16 7355 XP_006713613 16 7355 XP_006713612 16 7355 XP_006713611 16 7355 XP_006713610 16 7355 XP_006713609 16 7355 XP_006713608 16 7355 XP_006713607 16 7355 XP_006713606 16 7355 XP_006713605 16 7355 NP_001243040 15 9605 NP_001243035 15 9605 NP_004249 15 9605 NP_001243038 15 9605 NP_064593 15 9605 NP_003162 15 9605 NP_001120914 15 9605 NP_525124 15 9605 NP_001154 15 9605 NP_872363 15 9605 XP_005271570 15 9605 XP_005271569 15 9605 XP_006718878 15 9605 XP_005271568 15 9605 XP_005270125 15 9605 XP_005252025 15 9605 XP_005252024 15 9605 XP_006717156 15 9605 XP_006716241 15 9605 XP_005250769 15 9605 XP_005250768 15 9605 XP_005250767 15 9605 XP_005265293 15 9605 NP_115679 15 9605 NP_071800 15 9605 NP_001120913 15 9605>NP_008835 Length = 4128 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTNTMDMFV 9 LTNTMD+FV Sbjct: 3998 LTNTMDVFV 4006>NP_001075109 Length = 4097 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTNTMDMFV 9 LTNTMD+FV Sbjct: 3967 LTNTMDVFV 3975>NP_001138760 Length = 539 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LTNTMDMFV 9 LT+T++MF+ Sbjct: 166 LTSTLNMFI 174>NP_647480 Length = 589 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LTNTMDMFV 9 LT+T++MF+ Sbjct: 166 LTSTLNMFI 174>NP_056155 Length = 903 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TNTMDMFV 9 T+TMD FV Sbjct: 517 TDTMDTFV 524>XP_005265063 Length = 903 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TNTMDMFV 9 T+TMD FV Sbjct: 517 TDTMDTFV 524>NP_149040 Length = 475 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TMDMFV 9 TMDMFV Sbjct: 433 TMDMFV 438>NP_002323 Length = 4544 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TNTMDMF 8 +N MDMF Sbjct: 2093 SNNMDMF 2099>NP_000785 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNTMDMFV 9 +NT D+FV Sbjct: 310 SNTFDVFV 317>NP_783864 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NTMDMF 8 NTMD+F Sbjct: 312 NTMDIF 317>NP_056506 Length = 1092 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNTMDMFV 9 TNT D+F+ Sbjct: 871 TNTEDLFL 878>NP_001121696 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 335 TNTLDM 340>NP_001017395 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 449 TNTLDM 454>XP_005262701 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NTMDMF 8 NTMD+F Sbjct: 312 NTMDIF 317>XP_006713617 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 259 TNTLDM 264>XP_006713616 Length = 470 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 266 TNTLDM 271>XP_006713615 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 276 TNTLDM 281>XP_006713614 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 335 TNTLDM 340>XP_006713613 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 335 TNTLDM 340>XP_006713612 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 335 TNTLDM 340>XP_006713611 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713610 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713609 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713608 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713607 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713606 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713605 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TNTMDM 7 TNT+DM Sbjct: 449 TNTLDM 454>NP_001243040 Length = 959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LTNTMDM 7 LTNT D+ Sbjct: 492 LTNTFDL 498>NP_001243035 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LTNTMDM 7 LTNT D+ Sbjct: 554 LTNTFDL 560>NP_004249 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LTNTMDM 7 LTNT D+ Sbjct: 554 LTNTFDL 560>NP_001243038 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LTNTMDM 7 LTNT D+ Sbjct: 554 LTNTFDL 560>NP_064593 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LTNTMDM 7 LTNT D+ Sbjct: 317 LTNTFDL 323>NP_003162 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTNTMDMFV 9 L+N +D+FV Sbjct: 529 LSNLIDIFV 537>NP_001120914 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LTNTMDMFV 9 + N MD+F+ Sbjct: 226 ILNAMDIFI 234>NP_525124 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LTNTMDMFV 9 + N MD+F+ Sbjct: 226 ILNAMDIFI 234>NP_001154 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LTNTMDMF 8 L NT DM+ Sbjct: 634 LLNTQDMY 641>NP_872363 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 NTMDMF 8 NT DMF Sbjct: 865 NTQDMF 870>XP_005271570 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 NTMDMF 8 NT DMF Sbjct: 828 NTQDMF 833>XP_005271569 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 NTMDMF 8 NT DMF Sbjct: 828 NTQDMF 833>XP_006718878 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 NTMDMF 8 NT DMF Sbjct: 865 NTQDMF 870>XP_005271568 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 NTMDMF 8 NT DMF Sbjct: 865 NTQDMF 870>XP_005270125 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTNTMDMFV 9 L+N +D+FV Sbjct: 398 LSNLIDIFV 406>XP_005252025 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LTNTMDMF 8 L NT DM+ Sbjct: 623 LLNTQDMY 630>XP_005252024 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LTNTMDMF 8 L NT DM+ Sbjct: 634 LLNTQDMY 641>XP_006717156 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LTNTMDMF 8 L NT DM+ Sbjct: 634 LLNTQDMY 641>XP_006716241 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LTNTMDMFV 9 + N MD+F+ Sbjct: 226 ILNAMDIFI 234>XP_005250769 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LTNTMDMFV 9 + N MD+F+ Sbjct: 226 ILNAMDIFI 234>XP_005250768 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LTNTMDMFV 9 + N MD+F+ Sbjct: 226 ILNAMDIFI 234>XP_005250767 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LTNTMDMFV 9 + N MD+F+ Sbjct: 226 ILNAMDIFI 234>XP_005265293 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LTNTMDM 7 LTNT D+ Sbjct: 317 LTNTFDL 323>NP_115679 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTNTMD 6 LTNT+D Sbjct: 107 LTNTLD 112>NP_071800 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LTNTMDM 7 LTNT D+ Sbjct: 280 LTNTFDL 286>NP_001120913 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LTNTMDMFV 9 + N MD+F+ Sbjct: 226 ILNAMDIFI 234Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.135 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 362,822 Number of extensions: 567 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |