Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 18 1135 NP_001263689 18 1135 NP_001119584 18 1135 NP_001119586 18 1135 NP_001263625 18 1135 NP_001119590 18 1135 NP_001263690 18 1135 NP_001119585 18 1135 NP_001263624 18 1135 NP_001119588 18 1135 NP_001119587 18 1135 NP_001119589 18 1135 NP_001263627 18 1135 NP_001263628 18 1135 NP_001263626 18 1135 NP_057422 17 4312 NP_001128251 17 4312 NP_001269889 16 5631 NP_000224 16 5631 NP_003310 16 5631 NP_597676 16 5631 NP_001243779 16 5631 NP_596869 16 5631 NP_001269888 16 5631 NP_060707 16 5631 NP_000360 16 5631 XP_005268094 16 5631 XP_005246888 16 5631 XP_006712788 16 5631 XP_006712787 16 5631 XP_006712786 16 5631 XP_005264366 16 5631 XP_006712078 16 5631 NP_001254479 16 5631 NP_597681 16 5631 NP_001244126 15 9605 NP_003581 15 9605 NP_001244127 15 9605 NP_055816 15 9605 NP_001018110 15 9605 NP_689664 15 9605 NP_002363 15 9605 NP_001018101 15 9605 NP_001018100 15 9605 NP_001272829 15 9605 NP_001003811 15 9605 XP_006712863 15 9605 NP_112566 15 9605>NP_000537 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 252 LTIITLEDS 260>NP_001263689 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 213 LTIITLEDS 221>NP_001119584 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 252 LTIITLEDS 260>NP_001119586 Length = 341 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 252 LTIITLEDS 260>NP_001263625 Length = 302 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 213 LTIITLEDS 221>NP_001119590 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 213 LTIITLEDS 221>NP_001263690 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 213 LTIITLEDS 221>NP_001119585 Length = 346 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 252 LTIITLEDS 260>NP_001263624 Length = 307 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 213 LTIITLEDS 221>NP_001119588 Length = 209 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 120 LTIITLEDS 128>NP_001119587 Length = 261 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 120 LTIITLEDS 128>NP_001119589 Length = 214 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 120 LTIITLEDS 128>NP_001263627 Length = 182 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 93 LTIITLEDS 101>NP_001263628 Length = 187 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 93 LTIITLEDS 101>NP_001263626 Length = 234 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 LTIITLE+S Sbjct: 93 LTIITLEDS 101>NP_057422 Length = 975 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTIITLENS 9 L ++TLENS Sbjct: 670 LWLVTLENS 678>NP_001128251 Length = 1015 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTIITLENS 9 L ++TLENS Sbjct: 710 LWLVTLENS 718>NP_001269889 Length = 1135 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TIITLENS 9 TI+ LENS Sbjct: 1053 TILNLENS 1060>NP_000224 Length = 699 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LTIITLE 7 LT+ITLE Sbjct: 457 LTVITLE 463>NP_003310 Length = 26926 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IITLENS 9 I+TLENS Sbjct: 13268 ILTLENS 13274>NP_597676 Length = 27051 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IITLENS 9 I+TLENS Sbjct: 13393 ILTLENS 13399>NP_001243779 Length = 34350 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IITLENS 9 I+TLENS Sbjct: 20692 ILTLENS 20698>NP_596869 Length = 33423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IITLENS 9 I+TLENS Sbjct: 19765 ILTLENS 19771>NP_001269888 Length = 1135 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TIITLENS 9 TI+ LENS Sbjct: 1053 TILNLENS 1060>NP_060707 Length = 1150 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TIITLENS 9 TI+ LENS Sbjct: 1068 TILNLENS 1075>NP_000360 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LTIITLE 7 LT+ITLE Sbjct: 512 LTVITLE 518>XP_005268094 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LTIITLE 7 LT+ITLE Sbjct: 512 LTVITLE 518>XP_005246888 Length = 22663 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IITLENS 9 I+TLENS Sbjct: 9005 ILTLENS 9011>XP_006712788 Length = 24022 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IITLENS 9 I+TLENS Sbjct: 10364 ILTLENS 10370>XP_006712787 Length = 33978 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IITLENS 9 I+TLENS Sbjct: 20320 ILTLENS 20326>XP_006712786 Length = 35484 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IITLENS 9 I+TLENS Sbjct: 21826 ILTLENS 21832>XP_005264366 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LTIITLE 7 LT+ITLE Sbjct: 138 LTVITLE 144>XP_006712078 Length = 389 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LTIITLE 7 LT+ITLE Sbjct: 147 LTVITLE 153>NP_001254479 Length = 35991 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IITLENS 9 I+TLENS Sbjct: 22333 ILTLENS 22339>NP_597681 Length = 27118 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IITLENS 9 I+TLENS Sbjct: 13460 ILTLENS 13466>NP_001244126 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TIITLENS 9 TI+ +ENS Sbjct: 209 TIVEMENS 216>NP_003581 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TIITLENS 9 TI+ +ENS Sbjct: 275 TIVEMENS 282>NP_001244127 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TIITLENS 9 TI+ +ENS Sbjct: 281 TIVEMENS 288>NP_055816 Length = 3664 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LTIITLENS 9 +T++TLE++ Sbjct: 1642 VTVVTLESA 1650>NP_001018110 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTIITLENS 9 L +TLENS Sbjct: 178 LVDVTLENS 186>NP_689664 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTIITLENS 9 L +TLENS Sbjct: 178 LVDVTLENS 186>NP_002363 Length = 1144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ITLENS 9 ITLENS Sbjct: 758 ITLENS 763>NP_001018101 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTIITLENS 9 L +TLENS Sbjct: 178 LVDVTLENS 186>NP_001018100 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTIITLENS 9 L +TLENS Sbjct: 178 LVDVTLENS 186>NP_001272829 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTIITLENS 9 L +TLENS Sbjct: 178 LVDVTLENS 186>NP_001003811 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IITLEN 8 IITLEN Sbjct: 514 IITLEN 519>XP_006712863 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TIITLENS 9 TI+ +ENS Sbjct: 302 TIVEMENS 309>NP_112566 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IITLEN 8 IITLEN Sbjct: 499 IITLEN 504Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.130 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 446,445 Number of extensions: 780 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |