Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000224 20 390 NP_000360 20 390 XP_005268094 20 390 XP_005264366 20 390 XP_006712078 20 390 NP_852111 18 1135 NP_000136 18 1135 NP_005062 17 2528 XP_006722907 17 2528 XP_006722906 17 2528 XP_006722905 17 2528 NP_001005197 17 2528 NP_001005213 17 2528 NP_001013376 17 2528 NP_001001967 17 3301 NP_078858 17 4312 NP_001278232 17 4312 NP_001278214 17 4312 NP_004163 17 4312 NP_001160167 17 4312 NP_001276868 17 4312 NP_001276869 17 4312 XP_006714551 17 4312 XP_005248399 17 4312 NP_003688 17 4312 NP_006059 16 5631 NP_001718 16 5631 NP_001004459 16 5631 XP_005262522 16 5631 XP_005262521 16 5631 XP_005262694 16 5631 XP_005262693 16 5631 NP_001013375 16 5631 NP_001005204 16 5631 NP_001013374 16 5631 NP_065866 16 7355 NP_116586 16 7355 NP_006197 16 7355 NP_078966 16 7355 NP_071407 16 7355 NP_001275918 16 7355 NP_001159451 16 7355 NP_057425 16 7355 XP_006718005 16 7355 XP_006718004 16 7355 XP_006718003 16 7355 XP_006717953 16 7355 XP_006717952 16 7355 XP_006717951 16 7355 XP_006717950 16 7355 XP_006717949 16 7355 XP_006717948 16 7355 XP_006714104 16 7355 XP_005265800 16 7355 XP_006714103 16 7355 XP_006714102 16 7355 XP_005275746 16 7355 XP_003403671 16 7355 XP_006710003 16 7355 NP_002539 16 7355 NP_061822 16 7355 NP_004239 16 7355 NP_001005195 16 7355 NP_001005280 15 9605 NP_002021 15 9605 NP_004707 15 9605 NP_110409 15 9605 XP_006719002 15 9605 XP_006719001 15 9605 XP_006714565 15 9605 NP_001004477 15 9605>NP_000224 Length = 699 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 LSVYTLTV+ Sbjct: 452 LSVYTLTVI 460>NP_000360 Length = 764 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 LSVYTLTV+ Sbjct: 507 LSVYTLTVI 515>XP_005268094 Length = 764 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 LSVYTLTV+ Sbjct: 507 LSVYTLTVI 515>XP_005264366 Length = 380 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 LSVYTLTV+ Sbjct: 133 LSVYTLTVI 141>XP_006712078 Length = 389 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 LSVYTLTV+ Sbjct: 142 LSVYTLTVI 150>NP_852111 Length = 669 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 LSVYTLT + Sbjct: 429 LSVYTLTAI 437>NP_000136 Length = 695 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 LSVYTLT + Sbjct: 455 LSVYTLTAI 463>NP_005062 Length = 564 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 L +YTLTV+ Sbjct: 339 LGMYTLTVI 347>XP_006722907 Length = 564 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 L +YTLTV+ Sbjct: 339 LGMYTLTVI 347>XP_006722906 Length = 564 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 L +YTLTV+ Sbjct: 339 LGMYTLTVI 347>XP_006722905 Length = 564 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 L +YTLTV+ Sbjct: 339 LGMYTLTVI 347>NP_001005197 Length = 314 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 L +YT+TVV Sbjct: 32 LGIYTVTVV 40>NP_001005213 Length = 305 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 L VY+LTVV Sbjct: 31 LGVYSLTVV 39>NP_001013376 Length = 305 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 L VY+LTVV Sbjct: 31 LGVYSLTVV 39>NP_001001967 Length = 314 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 L VYT+TVV Sbjct: 34 LFVYTVTVV 42>NP_078858 Length = 4981 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 +S YTLTVV Sbjct: 2117 VSNYTLTVV 2125>NP_001278232 Length = 4983 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 +S YTLTVV Sbjct: 2117 VSNYTLTVV 2125>NP_001278214 Length = 4982 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 +S YTLTVV Sbjct: 2117 VSNYTLTVV 2125>NP_004163 Length = 542 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 L++YT+TV+ Sbjct: 314 LAMYTVTVI 322>NP_001160167 Length = 497 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 L++YT+TV+ Sbjct: 314 LAMYTVTVI 322>NP_001276868 Length = 496 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 L++YT+TV+ Sbjct: 268 LAMYTVTVI 276>NP_001276869 Length = 430 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 L++YT+TV+ Sbjct: 202 LAMYTVTVI 210>XP_006714551 Length = 542 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 L++YT+TV+ Sbjct: 314 LAMYTVTVI 322>XP_005248399 Length = 542 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 L++YT+TV+ Sbjct: 314 LAMYTVTVI 322>NP_003688 Length = 314 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 L +YTLTV+ Sbjct: 32 LVIYTLTVL 40>NP_006059 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 L++Y LT++ Sbjct: 281 LNIYNLTII 289>NP_001718 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 +SV+TLT++ Sbjct: 133 VSVFTLTIL 141>NP_001004459 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 LS+Y +TVV Sbjct: 45 LSMYVVTVV 53>XP_005262522 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 +SV+TLT++ Sbjct: 133 VSVFTLTIL 141>XP_005262521 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 +SV+TLT++ Sbjct: 133 VSVFTLTIL 141>XP_005262694 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 L++Y LT++ Sbjct: 281 LNIYNLTII 289>XP_005262693 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 L++Y LT++ Sbjct: 281 LNIYNLTII 289>NP_001013375 Length = 309 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSVYTLTVV 9 LS+Y TVV Sbjct: 32 LSIYLFTVV 40>NP_001005204 Length = 309 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSVYTLTVV 9 LS+Y TVV Sbjct: 32 LSIYLFTVV 40>NP_001013374 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSVYTLTVV 9 LS+Y TVV Sbjct: 32 LSIYLFTVV 40>NP_065866 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTLTVV 9 YTLTVV Sbjct: 429 YTLTVV 434>NP_116586 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTLTVV 9 YTLTVV Sbjct: 429 YTLTVV 434>NP_006197 Length = 1089 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VYTLTV 8 VYTLTV Sbjct: 272 VYTLTV 277>NP_078966 Length = 14507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVYTLTV 8 S YTLTV Sbjct: 145 STYTLTV 151>NP_071407 Length = 3354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTLTVV 9 YTLTVV Sbjct: 1385 YTLTVV 1390>NP_001275918 Length = 2286 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYTLTVV 9 +VY+LT+V Sbjct: 1853 AVYSLTIV 1860>NP_001159451 Length = 1994 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYTLTVV 9 +VY+LT+V Sbjct: 1561 AVYSLTIV 1568>NP_057425 Length = 2302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYTLTVV 9 +VY+LT+V Sbjct: 1869 AVYSLTIV 1876>XP_006718005 Length = 3397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTLTVV 9 YTLTVV Sbjct: 1428 YTLTVV 1433>XP_006718004 Length = 3399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTLTVV 9 YTLTVV Sbjct: 1430 YTLTVV 1435>XP_006718003 Length = 3419 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTLTVV 9 YTLTVV Sbjct: 1450 YTLTVV 1455>XP_006717953 Length = 2008 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYTLTVV 9 +VY+LT+V Sbjct: 1575 AVYSLTIV 1582>XP_006717952 Length = 2300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYTLTVV 9 +VY+LT+V Sbjct: 1867 AVYSLTIV 1874>XP_006717951 Length = 2315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYTLTVV 9 +VY+LT+V Sbjct: 1882 AVYSLTIV 1889>XP_006717950 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYTLTVV 9 +VY+LT+V Sbjct: 1883 AVYSLTIV 1890>XP_006717949 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYTLTVV 9 +VY+LT+V Sbjct: 1883 AVYSLTIV 1890>XP_006717948 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYTLTVV 9 +VY+LT+V Sbjct: 1883 AVYSLTIV 1890>XP_006714104 Length = 832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VYTLTV 8 VYTLTV Sbjct: 297 VYTLTV 302>XP_005265800 Length = 1089 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VYTLTV 8 VYTLTV Sbjct: 272 VYTLTV 277>XP_006714103 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VYTLTV 8 VYTLTV Sbjct: 294 VYTLTV 299>XP_006714102 Length = 1114 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VYTLTV 8 VYTLTV Sbjct: 297 VYTLTV 302>XP_005275746 Length = 3352 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTLTVV 9 YTLTVV Sbjct: 1383 YTLTVV 1388>XP_003403671 Length = 3354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTLTVV 9 YTLTVV Sbjct: 1385 YTLTVV 1390>XP_006710003 Length = 3374 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YTLTVV 9 YTLTVV Sbjct: 1405 YTLTVV 1410>NP_002539 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 LS+Y +TVV Sbjct: 32 LSMYLVTVV 40>NP_061822 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYTLTVV 9 S++TLTV+ Sbjct: 137 SIFTLTVM 144>NP_004239 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 +SV+TLT + Sbjct: 147 VSVFTLTTI 155>NP_001005195 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSVYTLTVV 9 L YT+TVV Sbjct: 31 LGFYTVTVV 39>NP_001005280 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LSVYTLTVV 9 L++YT+T++ Sbjct: 32 LAIYTVTLL 40>NP_002021 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LSVYTLTVV 9 +SVY +T++ Sbjct: 111 VSVYLITII 119>NP_004707 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SVYTLTV 8 S+YT+T+ Sbjct: 345 SIYTVTI 351>NP_110409 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSVYTLT 7 LSVYT T Sbjct: 55 LSVYTTT 61>XP_006719002 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SVYTLTV 8 S+YT+T+ Sbjct: 345 SIYTVTI 351>XP_006719001 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SVYTLTV 8 S+YT+T+ Sbjct: 345 SIYTVTI 351>XP_006714565 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSVYTLT 7 LSVYT T Sbjct: 55 LSVYTTT 61>NP_001004477 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 YTLTVV 9 YTLT+V Sbjct: 89 YTLTIV 94Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.135 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 365,181 Number of extensions: 513 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |