Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 19 869 XP_006714215 17 2528 XP_006714214 17 2528 XP_005262915 17 2528 NP_055806 17 2528 NP_002421 17 3301 NP_001273301 17 4312 NP_057569 17 4312 NP_001273300 17 4312 NP_000156 16 5631 NP_004095 16 5631 NP_005135 16 5631 NP_060881 16 5631 NP_015564 16 5631 NP_008988 16 5631 NP_076991 16 5631 NP_001005413 16 5631 NP_127490 16 5631 XP_005256858 16 5631 XP_005269520 16 5631 XP_006716430 16 5631 XP_005273626 16 5631 NP_000819 16 5631 NP_001138776 16 7355 NP_775821 16 7355 NP_079525 16 7355 NP_001138777 16 7355 XP_005260141 16 7355 XP_005251455 16 7355 XP_005251456 16 7355 XP_005251454 16 7355 NP_065785 15 9605 NP_001123362 15 9605 XP_006719187 15 9605 XP_006719186 15 9605 XP_006719185 15 9605 XP_006719184 15 9605 XP_006719183 15 9605 XP_006719182 15 9605 XP_006719181 15 9605 XP_006719180 15 9605 XP_006719179 15 9605>NP_115803 Length = 1156 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSTAVQNM 8 LSTAVQNM Sbjct: 860 LSTAVQNM 867>XP_006714215 Length = 3544 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LSTAVQNM 8 LST VQNM Sbjct: 279 LSTCVQNM 286>XP_006714214 Length = 3544 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LSTAVQNM 8 LST VQNM Sbjct: 279 LSTCVQNM 286>XP_005262915 Length = 3544 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LSTAVQNM 8 LST VQNM Sbjct: 279 LSTCVQNM 286>NP_055806 Length = 3526 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LSTAVQNM 8 LST VQNM Sbjct: 261 LSTCVQNM 268>NP_002421 Length = 1320 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LSTAVQNM 8 LSTA QNM Sbjct: 828 LSTACQNM 835>NP_001273301 Length = 222 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSTAVQNM 8 +STAVQN+ Sbjct: 203 VSTAVQNL 210>NP_057569 Length = 307 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSTAVQNM 8 +STAVQN+ Sbjct: 288 VSTAVQNL 295>NP_001273300 Length = 280 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSTAVQNM 8 +STAVQN+ Sbjct: 261 VSTAVQNL 268>NP_000156 Length = 382 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSTAVQNMW 9 L TAV++ W Sbjct: 37 LGTAVESAW 45>NP_004095 Length = 2511 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSTAVQNM 8 L TAV+NM Sbjct: 1228 LDTAVENM 1235>NP_005135 Length = 1189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSTAVQNMW 9 LSTA+ +W Sbjct: 673 LSTAMHQVW 681>NP_060881 Length = 1134 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSTAVQNMW 9 LSTA+ +W Sbjct: 673 LSTAMHQVW 681>NP_015564 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LSTAVQNMW 9 + AVQN W Sbjct: 178 MEAAVQNNW 186>NP_008988 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AVQNMW 9 AVQN W Sbjct: 151 AVQNQW 156>NP_076991 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 TAVQNMW 9 TA++N W Sbjct: 372 TAIENSW 378>NP_001005413 Length = 230 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AVQNMW 9 AVQN W Sbjct: 151 AVQNQW 156>NP_127490 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AVQNMW 9 AVQN W Sbjct: 151 AVQNQW 156>XP_005256858 Length = 344 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 TAVQNMW 9 TA++N W Sbjct: 154 TAIENSW 160>XP_005269520 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AVQNMW 9 AVQN W Sbjct: 151 AVQNQW 156>XP_006716430 Length = 1135 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSTAVQNMW 9 LSTA+ +W Sbjct: 674 LSTAMHQVW 682>XP_005273626 Length = 1190 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSTAVQNMW 9 LSTA+ +W Sbjct: 674 LSTAMHQVW 682>NP_000819 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LSTAVQNMW 9 + AVQN W Sbjct: 178 MEAAVQNNW 186>NP_001138776 Length = 1367 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 STAVQNMW 9 +TA+Q+ W Sbjct: 1304 ATAIQSAW 1311>NP_775821 Length = 1326 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAVQNM 8 TAVQNM Sbjct: 229 TAVQNM 234>NP_079525 Length = 1180 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 STAVQNMW 9 +TA+Q+ W Sbjct: 1117 ATAIQSAW 1124>NP_001138777 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 STAVQNMW 9 +TA+Q+ W Sbjct: 1071 ATAIQSAW 1078>XP_005260141 Length = 1367 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 STAVQNMW 9 +TA+Q+ W Sbjct: 1304 ATAIQSAW 1311>XP_005251455 Length = 1334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAVQNM 8 TAVQNM Sbjct: 229 TAVQNM 234>XP_005251456 Length = 1334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAVQNM 8 TAVQNM Sbjct: 229 TAVQNM 234>XP_005251454 Length = 1334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAVQNM 8 TAVQNM Sbjct: 229 TAVQNM 234>NP_065785 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STAVQNM 8 STAV NM Sbjct: 338 STAVDNM 344>NP_001123362 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LSTAVQNMW 9 +ST +N+W Sbjct: 240 ISTQQENVW 248>XP_006719187 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STAVQNM 8 STAV NM Sbjct: 338 STAVDNM 344>XP_006719186 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STAVQNM 8 STAV NM Sbjct: 338 STAVDNM 344>XP_006719185 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STAVQNM 8 STAV NM Sbjct: 338 STAVDNM 344>XP_006719184 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STAVQNM 8 STAV NM Sbjct: 338 STAVDNM 344>XP_006719183 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STAVQNM 8 STAV NM Sbjct: 338 STAVDNM 344>XP_006719182 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STAVQNM 8 STAV NM Sbjct: 338 STAVDNM 344>XP_006719181 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STAVQNM 8 STAV NM Sbjct: 338 STAVDNM 344>XP_006719180 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STAVQNM 8 STAV NM Sbjct: 338 STAVDNM 344>XP_006719179 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STAVQNM 8 STAV NM Sbjct: 338 STAVDNM 344Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.114 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 347,026 Number of extensions: 368 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |