Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001121619 18 1482 NP_000258 18 1482 NP_001035957 18 1482 XP_006721991 18 1482 XP_006721990 18 1482 XP_006721989 18 1482 XP_005258041 18 1482 XP_006721988 18 1482 XP_006721987 18 1482 XP_006721986 18 1482 XP_005258040 18 1482 XP_006721985 18 1482 NP_006763 17 3301 NP_705839 17 4312 NP_001154926 17 4312 NP_001154924 17 4312 NP_001275915 17 4312 NP_001275914 17 4312 NP_009099 17 4312 XP_005256997 17 4312 XP_005256995 17 4312 XP_006718527 17 4312 NP_054733 16 5631 NP_055513 16 5631 XP_006711905 16 5631 XP_006711904 16 5631 NP_653172 16 7355 NP_001273719 16 7355 NP_002829 16 7355 NP_563578 16 7355 NP_004720 16 7355 NP_001164607 16 7355 NP_001164606 16 7355 XP_005262934 16 7355 XP_006711538 16 7355 XP_006711537 16 7355 XP_006711536 16 7355 XP_006711535 16 7355 NP_619723 15 9605 NP_115941 15 9605 NP_001182583 15 9605 NP_115916 15 9605 NP_001182582 15 9605 NP_001076582 15 9605 NP_037535 15 9605 NP_001034966 15 9605 NP_852150 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_671722 15 9605 XP_006723237 15 9605 XP_006723236 15 9605 XP_006723235 15 9605 XP_006723234 15 9605 XP_005251782 15 9605 XP_006717025 15 9605 XP_006717024 15 9605 XP_005251781 15 9605 XP_005251780 15 9605 XP_005251779 15 9605 XP_005251778 15 9605 XP_005251777 15 9605 XP_005251776 15 9605 XP_005251383 15 9605 XP_005251382 15 9605 XP_005251381 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_001121619 Length = 593 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 LSMVK IHA Sbjct: 494 LSMVKLIHA 502>NP_000258 Length = 2818 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 LSMVK IHA Sbjct: 494 LSMVKLIHA 502>NP_001035957 Length = 2839 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 LSMVK IHA Sbjct: 494 LSMVKLIHA 502>XP_006721991 Length = 1632 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 LSMVK IHA Sbjct: 504 LSMVKLIHA 512>XP_006721990 Length = 2823 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 LSMVK IHA Sbjct: 504 LSMVKLIHA 512>XP_006721989 Length = 2823 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 LSMVK IHA Sbjct: 504 LSMVKLIHA 512>XP_005258041 Length = 2836 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 LSMVK IHA Sbjct: 494 LSMVKLIHA 502>XP_006721988 Length = 2846 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 LSMVK IHA Sbjct: 504 LSMVKLIHA 512>XP_006721987 Length = 2849 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 LSMVK IHA Sbjct: 504 LSMVKLIHA 512>XP_006721986 Length = 2854 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 LSMVK IHA Sbjct: 491 LSMVKLIHA 499>XP_005258040 Length = 2857 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 LSMVK IHA Sbjct: 494 LSMVKLIHA 502>XP_006721985 Length = 2867 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 LSMVK IHA Sbjct: 504 LSMVKLIHA 512>NP_006763 Length = 1343 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SMVKPIHA 9 S++KP+H+ Sbjct: 204 SIIKPVHS 211>NP_705839 Length = 242 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SMVKPIH 8 S++KPIH Sbjct: 150 SLLKPIH 156>NP_001154926 Length = 259 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SMVKPIH 8 S++KPIH Sbjct: 167 SLLKPIH 173>NP_001154924 Length = 242 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SMVKPIH 8 S++KPIH Sbjct: 150 SLLKPIH 156>NP_001275915 Length = 1616 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 L+ V+P+HA Sbjct: 1517 LAQVEPLHA 1525>NP_001275914 Length = 1621 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 L+ V+P+HA Sbjct: 1522 LAQVEPLHA 1530>NP_009099 Length = 1581 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 L+ V+P+HA Sbjct: 1482 LAQVEPLHA 1490>XP_005256997 Length = 1560 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 L+ V+P+HA Sbjct: 1461 LAQVEPLHA 1469>XP_005256995 Length = 1621 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 L+ V+P+HA Sbjct: 1522 LAQVEPLHA 1530>XP_006718527 Length = 263 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SMVKPIH 8 S++KPIH Sbjct: 150 SLLKPIH 156>NP_054733 Length = 2136 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSMVKPIH 8 LSM KP++ Sbjct: 1540 LSMAKPVY 1547>NP_055513 Length = 807 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SMVKPIHA 9 ++ KPIHA Sbjct: 450 NVTKPIHA 457>XP_006711905 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SMVKPIHA 9 ++ KPIHA Sbjct: 450 NVTKPIHA 457>XP_006711904 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SMVKPIHA 9 ++ KPIHA Sbjct: 273 NVTKPIHA 280>NP_653172 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 +KPIHA Sbjct: 343 MKPIHA 348>NP_001273719 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 +KPIHA Sbjct: 343 MKPIHA 348>NP_002829 Length = 1306 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSMVKPIHA 9 L V+PIHA Sbjct: 627 LMNVEPIHA 635>NP_563578 Length = 1145 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSMVKPIHA 9 L V+PIHA Sbjct: 466 LMNVEPIHA 474>NP_004720 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LSMVKPI 7 +SMVKP+ Sbjct: 419 ISMVKPL 425>NP_001164607 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LSMVKPI 7 +SMVKP+ Sbjct: 419 ISMVKPL 425>NP_001164606 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LSMVKPI 7 +SMVKP+ Sbjct: 419 ISMVKPL 425>XP_005262934 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 +KPIHA Sbjct: 338 MKPIHA 343>XP_006711538 Length = 1189 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSMVKPIHA 9 L V+PIHA Sbjct: 510 LMNVEPIHA 518>XP_006711537 Length = 1192 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSMVKPIHA 9 L V+PIHA Sbjct: 513 LMNVEPIHA 521>XP_006711536 Length = 1240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSMVKPIHA 9 L V+PIHA Sbjct: 561 LMNVEPIHA 569>XP_006711535 Length = 1258 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSMVKPIHA 9 L V+PIHA Sbjct: 579 LMNVEPIHA 587>NP_619723 Length = 1065 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 MVKPIHA 9 ++KP+H+ Sbjct: 32 VIKPVHS 38>NP_115941 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 MVKPIHA 9 ++KP+H+ Sbjct: 128 VIKPVHS 134>NP_001182583 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 V+PIHA Sbjct: 331 VEPIHA 336>NP_115916 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 V+PIHA Sbjct: 360 VEPIHA 365>NP_001182582 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 V+PIHA Sbjct: 340 VEPIHA 345>NP_001076582 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 V+PIHA Sbjct: 340 VEPIHA 345>NP_037535 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 V+PIHA Sbjct: 481 VEPIHA 486>NP_001034966 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 V+PIHA Sbjct: 488 VEPIHA 493>NP_852150 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 V+PIHA Sbjct: 340 VEPIHA 345>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 + +V+P+H+ Sbjct: 5610 IKLVRPLHS 5618>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 + +V+P+H+ Sbjct: 5735 IKLVRPLHS 5743>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 + +V+P+H+ Sbjct: 13034 IKLVRPLHS 13042>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 + +V+P+H+ Sbjct: 12107 IKLVRPLHS 12115>NP_671722 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SMVKPI 7 SMVKP+ Sbjct: 10 SMVKPV 15>XP_006723237 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 V+PIHA Sbjct: 369 VEPIHA 374>XP_006723236 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 V+PIHA Sbjct: 384 VEPIHA 389>XP_006723235 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 V+PIHA Sbjct: 496 VEPIHA 501>XP_006723234 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VKPIHA 9 V+PIHA Sbjct: 503 VEPIHA 508>XP_005251782 Length = 1072 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 MVKPIHA 9 ++KP+H+ Sbjct: 39 VIKPVHS 45>XP_006717025 Length = 1085 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 MVKPIHA 9 ++KP+H+ Sbjct: 52 VIKPVHS 58>XP_006717024 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 MVKPIHA 9 ++KP+H+ Sbjct: 53 VIKPVHS 59>XP_005251781 Length = 1128 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 MVKPIHA 9 ++KP+H+ Sbjct: 95 VIKPVHS 101>XP_005251780 Length = 1138 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 MVKPIHA 9 ++KP+H+ Sbjct: 156 VIKPVHS 162>XP_005251779 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 MVKPIHA 9 ++KP+H+ Sbjct: 156 VIKPVHS 162>XP_005251778 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 MVKPIHA 9 ++KP+H+ Sbjct: 128 VIKPVHS 134>XP_005251777 Length = 1167 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 MVKPIHA 9 ++KP+H+ Sbjct: 156 VIKPVHS 162>XP_005251776 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 MVKPIHA 9 ++KP+H+ Sbjct: 156 VIKPVHS 162>XP_005251383 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SMVKPI 7 SMVKP+ Sbjct: 10 SMVKPV 15>XP_005251382 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SMVKPI 7 SMVKP+ Sbjct: 10 SMVKPV 15>XP_005251381 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SMVKPI 7 SMVKP+ Sbjct: 10 SMVKPV 15>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 + +V+P+H+ Sbjct: 1347 IKLVRPLHS 1355>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 + +V+P+H+ Sbjct: 2706 IKLVRPLHS 2714>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 + +V+P+H+ Sbjct: 12662 IKLVRPLHS 12670>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 + +V+P+H+ Sbjct: 14168 IKLVRPLHS 14176>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 + +V+P+H+ Sbjct: 14675 IKLVRPLHS 14683>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 LSMVKPIHA 9 + +V+P+H+ Sbjct: 5802 IKLVRPLHS 5810Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.132 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 544,261 Number of extensions: 650 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |