Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055726 20 299 NP_055318 18 1482 XP_006719406 18 1482 XP_005254186 17 2528 NP_006456 17 2528 NP_001010938 17 4312 NP_005772 17 4312 XP_005269332 17 4312 XP_005269331 17 4312 XP_005269330 17 4312 XP_005269329 17 4312 XP_005269328 17 4312 XP_005269327 17 4312 XP_006713530 17 4312 XP_006713529 17 4312 XP_005269326 17 4312 XP_006713528 17 4312 XP_006713527 17 4312 XP_005269325 17 4312 XP_006713526 17 4312 XP_006713525 17 4312 XP_006713524 17 4312 XP_006713523 17 4312 NP_001128662 16 5631 NP_056057 16 5631 NP_001035207 16 5631 NP_003817 16 5631 NP_068591 16 5631 NP_919289 16 5631 NP_001138738 16 7355 NP_001138737 16 7355 NP_060859 16 7355 NP_001138630 16 7355 NP_006611 16 7355 NP_001269539 16 7355 NP_001269535 16 7355 NP_057140 16 7355 NP_001269538 16 7355 NP_065997 15 9605 NP_079096 15 9605 NP_001018125 15 9605 NP_149075 15 9605 NP_001073919 15 9605 NP_077003 15 9605 NP_001091982 15 9605 NP_005800 15 9605 NP_056503 15 9605 NP_115528 15 9605 XP_005276286 15 9605 XP_005277590 15 9605 XP_005272559 15 9605 XP_005252170 15 9605 XP_005252168 15 9605 XP_006717258 15 9605 XP_005252166 15 9605 XP_006715596 15 9605 XP_005267137 15 9605 XP_006715595 15 9605 XP_005267136 15 9605 XP_005265698 15 9605 XP_005265004 15 9605 XP_006713088 15 9605 XP_006713087 15 9605 XP_005265003 15 9605 XP_006713086 15 9605 XP_006713085 15 9605 XP_006713084 15 9605 XP_005276004 15 9605>NP_055726 Length = 961 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSKDFAKLG 9 L+KDFAKLG Sbjct: 712 LNKDFAKLG 720>NP_055318 Length = 2785 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LSKDFAKLG 9 L KD+AKLG Sbjct: 2162 LLKDYAKLG 2170>XP_006719406 Length = 2380 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LSKDFAKLG 9 L KD+AKLG Sbjct: 2162 LLKDYAKLG 2170>XP_005254186 Length = 561 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSKDFAKL 8 +S+DFAKL Sbjct: 202 ISRDFAKL 209>NP_006456 Length = 560 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSKDFAKL 8 +S+DFAKL Sbjct: 202 ISRDFAKL 209>NP_001010938 Length = 1086 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 606 LSSDFKRLG 614>NP_005772 Length = 1038 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 528 LSSDFKRLG 536>XP_005269332 Length = 741 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 229 LSSDFKRLG 237>XP_005269331 Length = 816 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 304 LSSDFKRLG 312>XP_005269330 Length = 979 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 467 LSSDFKRLG 475>XP_005269329 Length = 1040 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 560 LSSDFKRLG 568>XP_005269328 Length = 1055 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 543 LSSDFKRLG 551>XP_005269327 Length = 1055 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 543 LSSDFKRLG 551>XP_006713530 Length = 1063 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 551 LSSDFKRLG 559>XP_006713529 Length = 1085 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 606 LSSDFKRLG 614>XP_005269326 Length = 1087 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 575 LSSDFKRLG 583>XP_006713528 Length = 1101 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 621 LSSDFKRLG 629>XP_006713527 Length = 1115 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 606 LSSDFKRLG 614>XP_005269325 Length = 1118 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 606 LSSDFKRLG 614>XP_006713526 Length = 1118 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 606 LSSDFKRLG 614>XP_006713525 Length = 1119 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 607 LSSDFKRLG 615>XP_006713524 Length = 1131 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 621 LSSDFKRLG 629>XP_006713523 Length = 1133 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LS DF +LG Sbjct: 621 LSSDFKRLG 629>NP_001128662 Length = 1133 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSKDFAKLG 9 L++DF +LG Sbjct: 552 LARDFERLG 560>NP_056057 Length = 1205 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSKDFAKLG 9 L++DF +LG Sbjct: 613 LARDFERLG 621>NP_001035207 Length = 1450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSKDFAKLG 9 L++DF +LG Sbjct: 858 LARDFERLG 866>NP_003817 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 + D+AKLG Sbjct: 262 MDNDYAKLG 270>NP_068591 Length = 526 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSKDFAKLG 9 L+KD AK+G Sbjct: 375 LNKDSAKVG 383>NP_919289 Length = 1368 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KDFAKLG 9 KD++KLG Sbjct: 38 KDYSKLG 44>NP_001138738 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KDFAKLG 9 +DFA+LG Sbjct: 243 RDFAQLG 249>NP_001138737 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KDFAKLG 9 +DFA+LG Sbjct: 243 RDFAQLG 249>NP_060859 Length = 364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KDFAKLG 9 +DFA+LG Sbjct: 256 RDFAQLG 262>NP_001138630 Length = 642 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 L KDF +LG Sbjct: 613 LYKDFKELG 621>NP_006611 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 L KDF +LG Sbjct: 655 LYKDFKELG 663>NP_001269539 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KDFAKLG 9 KDF+K G Sbjct: 116 KDFSKFG 122>NP_001269535 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KDFAKLG 9 KDF+K G Sbjct: 194 KDFSKFG 200>NP_057140 Length = 238 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KDFAKLG 9 KDF+K G Sbjct: 147 KDFSKFG 153>NP_001269538 Length = 162 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KDFAKLG 9 KDF+K G Sbjct: 147 KDFSKFG 153>NP_065997 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 +KD AK+G Sbjct: 434 AKDHAKMG 441>NP_079096 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 +KD AK+G Sbjct: 434 AKDHAKMG 441>NP_001018125 Length = 1451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 S+DFAK G Sbjct: 705 SQDFAKDG 712>NP_149075 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 S+DFAK G Sbjct: 705 SQDFAKDG 712>NP_001073919 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SKDFAKL 8 SKDF K+ Sbjct: 695 SKDFCKI 701>NP_077003 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LSKDFAK 7 L+KDFA+ Sbjct: 279 LAKDFAR 285>NP_001091982 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSKDFAKL 8 L +DFAK+ Sbjct: 4 LEEDFAKI 11>NP_005800 Length = 198 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 ++DF KLG Sbjct: 62 AEDFRKLG 69>NP_056503 Length = 1060 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LSKDFAK 7 LSKD+A+ Sbjct: 210 LSKDYAR 216>NP_115528 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LSK F +LG Sbjct: 127 LSKKFPQLG 135>XP_005276286 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 S+DFAK G Sbjct: 252 SQDFAKDG 259>XP_005277590 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 S+DFAK G Sbjct: 452 SQDFAKDG 459>XP_005272559 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSKDFAKLG 9 LSK F +LG Sbjct: 127 LSKKFPQLG 135>XP_005252170 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 +KD AK+G Sbjct: 449 AKDHAKMG 456>XP_005252168 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 +KD AK+G Sbjct: 449 AKDHAKMG 456>XP_006717258 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 +KD AK+G Sbjct: 449 AKDHAKMG 456>XP_005252166 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 +KD AK+G Sbjct: 434 AKDHAKMG 441>XP_006715596 Length = 743 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SKDFAKL 8 SKDF K+ Sbjct: 610 SKDFCKI 616>XP_005267137 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SKDFAKL 8 SKDF K+ Sbjct: 695 SKDFCKI 701>XP_006715595 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SKDFAKL 8 SKDF K+ Sbjct: 695 SKDFCKI 701>XP_005267136 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SKDFAKL 8 SKDF K+ Sbjct: 695 SKDFCKI 701>XP_005265698 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 S+DFAK G Sbjct: 236 SQDFAKDG 243>XP_005265004 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 S+DFAK G Sbjct: 40 SQDFAKDG 47>XP_006713088 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 S+DFAK G Sbjct: 616 SQDFAKDG 623>XP_006713087 Length = 1432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 S+DFAK G Sbjct: 705 SQDFAKDG 712>XP_005265003 Length = 1451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 S+DFAK G Sbjct: 705 SQDFAKDG 712>XP_006713086 Length = 1458 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 S+DFAK G Sbjct: 705 SQDFAKDG 712>XP_006713085 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 S+DFAK G Sbjct: 705 SQDFAKDG 712>XP_006713084 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 S+DFAK G Sbjct: 705 SQDFAKDG 712>XP_005276004 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKDFAKLG 9 S+DFAK G Sbjct: 243 SQDFAKDG 250Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.140 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 519,502 Number of extensions: 949 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |