Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 19 869 NP_444254 19 869 NP_444253 19 869 NP_444255 19 869 NP_444260 19 869 NP_444259 19 869 XP_005247551 19 869 XP_005247550 19 869 XP_006713712 19 869 XP_005247549 19 869 NP_005655 18 1935 NP_001171134 17 4312 NP_060621 17 4312 NP_001171136 17 4312 NP_694978 17 4312 XP_006712674 17 4312 XP_006712673 17 4312 XP_006712672 17 4312 XP_005246722 17 4312 NP_001171135 17 4312 NP_689801 16 5631 XP_005268737 16 5631 NP_000824 16 7355 NP_001127879 16 7355 NP_057736 16 7355 XP_005255324 16 7355 NP_001123918 16 7355 NP_000292 15 9605 NP_000568 15 9605 NP_776214 15 9605 NP_004813 15 9605 NP_776213 15 9605 NP_001269845 15 9605 NP_056288 15 9605 NP_689944 15 9605 NP_001269848 15 9605 NP_005348 15 9605 NP_110398 15 9605 NP_149022 15 9605 NP_001073863 15 9605 XP_005258998 15 9605 XP_006723281 15 9605 XP_005258997 15 9605 XP_005258996 15 9605 XP_005258995 15 9605 XP_005258994 15 9605 XP_006721658 15 9605 XP_005256331 15 9605 XP_006716507 15 9605 XP_005251255 15 9605 XP_005251254 15 9605 XP_005251253 15 9605 XP_005251252 15 9605 XP_005251250 15 9605 XP_005251248 15 9605 XP_006716506 15 9605 XP_005251246 15 9605 XP_005248946 15 9605 NP_001091643 15 9605 NP_940884 15 9605 NP_996763 15 9605 NP_001245212 15 9605>NP_444256 Length = 1794 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSGRKSST 8 LSGRKSST Sbjct: 1647 LSGRKSST 1654>NP_444254 Length = 1845 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSGRKSST 8 LSGRKSST Sbjct: 1698 LSGRKSST 1705>NP_444253 Length = 1914 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSGRKSST 8 LSGRKSST Sbjct: 1767 LSGRKSST 1774>NP_444255 Length = 1863 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSGRKSST 8 LSGRKSST Sbjct: 1716 LSGRKSST 1723>NP_444260 Length = 154 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSGRKSST 8 LSGRKSST Sbjct: 7 LSGRKSST 14>NP_444259 Length = 153 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSGRKSST 8 LSGRKSST Sbjct: 7 LSGRKSST 14>XP_005247551 Length = 1855 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSGRKSST 8 LSGRKSST Sbjct: 1708 LSGRKSST 1715>XP_005247550 Length = 1856 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSGRKSST 8 LSGRKSST Sbjct: 1709 LSGRKSST 1716>XP_006713712 Length = 1923 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSGRKSST 8 LSGRKSST Sbjct: 1777 LSGRKSST 1784>XP_005247549 Length = 1924 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSGRKSST 8 LSGRKSST Sbjct: 1777 LSGRKSST 1784>NP_005655 Length = 507 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LSGRKSSTE 9 LSGRK +TE Sbjct: 121 LSGRKMATE 129>NP_001171134 Length = 2446 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGRKSSTE 9 +S RK+STE Sbjct: 1178 ISSRKTSTE 1186>NP_060621 Length = 2472 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGRKSSTE 9 +S RK+STE Sbjct: 1178 ISSRKTSTE 1186>NP_001171136 Length = 2446 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGRKSSTE 9 +S RK+STE Sbjct: 1178 ISSRKTSTE 1186>NP_694978 Length = 242 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSGRKSST 8 +SGRK+ST Sbjct: 60 VSGRKNST 67>XP_006712674 Length = 2436 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGRKSSTE 9 +S RK+STE Sbjct: 1142 ISSRKTSTE 1150>XP_006712673 Length = 2441 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGRKSSTE 9 +S RK+STE Sbjct: 1147 ISSRKTSTE 1155>XP_006712672 Length = 2443 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGRKSSTE 9 +S RK+STE Sbjct: 1149 ISSRKTSTE 1157>XP_005246722 Length = 2472 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGRKSSTE 9 +S RK+STE Sbjct: 1178 ISSRKTSTE 1186>NP_001171135 Length = 2446 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGRKSSTE 9 +S RK+STE Sbjct: 1178 ISSRKTSTE 1186>NP_689801 Length = 836 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSGRKSSTE 9 L+GRKS E Sbjct: 689 LTGRKSEAE 697>XP_005268737 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSGRKSSTE 9 L+GRKS E Sbjct: 572 LTGRKSEAE 580>NP_000824 Length = 1464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSGRKSS 7 LSG+KSS Sbjct: 1336 LSGKKSS 1342>NP_001127879 Length = 1464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSGRKSS 7 LSG+KSS Sbjct: 1336 LSGKKSS 1342>NP_057736 Length = 848 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSGRKSSTE 9 L+GR STE Sbjct: 33 LAGRHGSTE 41>XP_005255324 Length = 1516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSGRKSS 7 LSG+KSS Sbjct: 1388 LSGKKSS 1394>NP_001123918 Length = 176 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GRKSSTE 9 G KSSTE Sbjct: 54 GEKSSTE 60>NP_000292 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSGRKSSTE 9 L+GR STE Sbjct: 735 LNGRVQSTE 743>NP_000568 Length = 159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGRKSS 7 SGRKSS Sbjct: 10 SGRKSS 15>NP_776214 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGRKSS 7 SGRKSS Sbjct: 28 SGRKSS 33>NP_004813 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 359 LSGRKS 364>NP_776213 Length = 180 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGRKSS 7 SGRKSS Sbjct: 31 SGRKSS 36>NP_001269845 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 221 LSGRKS 226>NP_056288 Length = 2046 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSGRKSSTE 9 L+G KSS E Sbjct: 495 LTGHKSSPE 503>NP_689944 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSGRKSST 8 L+G KSST Sbjct: 211 LTGAKSST 218>NP_001269848 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 231 LSGRKS 236>NP_005348 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 834 LSGRKS 839>NP_110398 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 335 LSGRKS 340>NP_149022 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGRKSS 7 SGRKSS Sbjct: 494 SGRKSS 499>NP_001073863 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 291 LSGRKS 296>XP_005258998 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 533 LSGRKS 538>XP_006723281 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 533 LSGRKS 538>XP_005258997 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 533 LSGRKS 538>XP_005258996 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 544 LSGRKS 549>XP_005258995 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 579 LSGRKS 584>XP_005258994 Length = 1000 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 758 LSGRKS 763>XP_006721658 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 359 LSGRKS 364>XP_005256331 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGRKSS 7 SGRKSS Sbjct: 402 SGRKSS 407>XP_006716507 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 41 LSGRKS 46>XP_005251255 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 41 LSGRKS 46>XP_005251254 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 117 LSGRKS 122>XP_005251253 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 118 LSGRKS 123>XP_005251252 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 127 LSGRKS 132>XP_005251250 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 291 LSGRKS 296>XP_005251248 Length = 848 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 291 LSGRKS 296>XP_006716506 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 231 LSGRKS 236>XP_005251246 Length = 883 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 291 LSGRKS 296>XP_005248946 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSGRKSST 8 L+G KSST Sbjct: 113 LTGAKSST 120>NP_001091643 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGRKSS 7 SGRKSS Sbjct: 402 SGRKSS 407>NP_940884 Length = 175 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSGRKSS 7 L GRKSS Sbjct: 36 LEGRKSS 42>NP_996763 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 87 LSGRKS 92>NP_001245212 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSGRKS 6 LSGRKS Sbjct: 87 LSGRKS 92Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.286 0.106 0.243 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 498,688 Number of extensions: 570 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |